Apteryx rowi (Okarito brown kiwi): 112967181
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Entry
112967181 CDS
T07573
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112967181 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arow04131
]
112967181 (TGFBRAP1)
Membrane trafficking [BR:
arow04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112967181 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
112967181
NCBI-ProteinID:
XP_025923848
Ensembl:
ENSARWG00000013660
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MTYSEVIKQDHPEGTMSVKAFKLVSAVEREMLMGDKAHINIECIECCGKNLYIGTNDCFI
YHFLLDEKISTAGKVTFAATKQLHKYLGFKKSVTELKAASALTRLLVLCDNTITLVNMMN
LEPVPTGARIKGAVTFTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFT
PEQPYAVAVDGYYLCLALTTQYIILNYNTGISQDLFPYCSDEKRPIVKRIGRQEFLLAGP
GGLGMFATVDGISQRAPVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKE
GHILQDFEGKVIVATNKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQ
VMYKRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHE
YADLNQLTQGDQEKMTKCKRFLMSYLNEVRSTDVANGYKEDIDTALLKLYAEANHESLLD
LLVSENFCLLTDSAAWLEKHKKYFALGLLYHYNGQDAAALQLWVKIVNGDIQDSTRSDLY
EYIVDFLTFCSDQDLVWKYSEWALQKNEEVGVQIFTKRPLEEQEKNINPDDIISRLNKYP
KSLVKYLEHLVLERRIEKEKYHTHLAVLYLEAIFQLKSVATDNCTETTELLFKLRSLLQK
SDLYRIHFILDKIRGTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCIWNSENR
GLQYRQRLFHMLLSVYLNTGTSDCALVMAAVDLLNNHAAEFDAALVLQLVPDNWSVQLLC
PFLAGAVRQSIHTTRMTQIALGLAQAENLIYKHEKVKQKGTPILLSDKKVCQVCQNPFCK
PVFVKYPNGGMVHTHCAANRHLNSNMIHRSSSSSNQT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgacgtattccgaggtgattaaacaagatcacccagaaggcacaatgagtgtcaaagct
ttcaagctcgtttccgctgttgagcgggagatgttaatgggagacaaagctcacatcaac
attgaatgcattgagtgttgtggaaagaacctctacattggaaccaatgactgctttatc
tatcactttctgttggacgaaaagatatcaacagctggaaaagtaactttcgctgccacc
aagcaactgcataaatacctgggcttcaagaagtctgtgactgagctaaaagcagcttct
gcactcaccaggcttcttgtgctttgtgacaacacaataacactagttaatatgatgaac
ttggaacctgttcccactggcgctagaatcaaaggagctgtgacattcacattaaatgaa
aaccctgtgagtggggaccctttctgtgttgaagtctgcattatctcagtcaagcgtcgg
accattcaaatgttcatggtgtttgaagacagagtccagatagtgaaggaagtgtttact
ccagagcaaccctacgctgtggctgtagatggttattacttatgtcttgcacttactaca
caatatatcatattgaattataatactggcatctcccaggatctatttccttattgcagt
gatgagaaacggccaattgtgaaaaggataggcagacaggagtttctgttggctggtcct
ggagggctaggcatgtttgcaactgtagatggcatttcacagcgtgcccctgtgcactgg
tcggagaacgtgatcggagcagccttgtgttttccttacgtggttgctctagatgatgag
ttcattacagtgcacagcatgctggaccagcagcaaaagcaaaccctaccttttaaagaa
ggtcacattctacaggactttgaaggcaaggtaattgttgctactaataagggtgtatat
atcttggtgccactacctttggaaaaacagattcaggatcttctagctagccacagagtg
gaagaagcccttgttttagcaaaaggagctcgaaggaatattccaaaagagaagtttcag
gtaatgtacaaacgtatcctgcagcaagcaggttttattcagtttgcacagcttcagttc
cttgaagcaaaagagctcttcagaagcggccagcttgatgtccgggagctgatctctctc
taccccttcctgttgcctacttcctcttcatttatacgatctcatccccctctgcatgag
tatgctgacctaaaccagctgacacaaggggaccaggagaagatgacaaaatgcaaacga
ttcctcatgagctacttaaatgaagtccgcagcactgatgttgcaaatggctacaaggaa
gatattgacacagctttacttaagttgtatgcagaggcaaatcatgaaagtcttctagat
ctgctagtttctgagaatttttgtcttttaacagatagtgctgcctggctggaaaaacac
aaaaagtattttgcccttggtctcctgtatcactacaatggtcaggatgctgcagcactt
cagttatgggtgaaaatagttaatggagacattcaagactctacacgttcagatctctat
gaatacatagtggacttccttacattctgctcagaccaagatctagtgtggaaatactct
gaatgggctttacagaaaaatgaagaggttggagtacagattttcactaaaaggcctttg
gaagagcaggaaaaaaacattaatccagatgatatcatcagtcgccttaacaaataccct
aagtcacttgttaaatatctagaacatctagtgttggaaagaagaatagagaaggagaag
taccatacccatctagctgtcttgtatttggaagcaatatttcagttaaaatctgtggct
acagacaattgtacagaaacaactgaattgctgtttaaactacgcagtcttcttcagaaa
tctgatctttatagaattcactttattttggataaaatccggggcacagatcttcatatg
gaaagtgcaattttatatgggaaactagaagaacatgagaaagctttgcatatcctggtc
catgagttaaaggatttccatgctgctgaagaatactgtatatggaactctgagaataga
ggtctgcagtacagacagaggcttttccatatgctgctgtcagtatatctaaatacaggc
acttcagactgtgcactagtcatggctgctgtggatctcttgaataaccatgctgctgaa
tttgatgcagccctagttttgcagctggtgcctgacaactggtcagtgcagctcctctgc
ccattcctggctggagcagtgaggcaaagcattcatacaacaagaatgactcagattgca
cttggattagcacaagctgaaaacttaatctacaaacacgagaaggttaaacaaaaagga
accccaattcttctttcggataaaaaggtctgtcaggtgtgccaaaatcctttctgcaag
cctgtatttgtgaaatacccaaatgggggtatggtccacacacactgtgctgcaaacaga
catctgaattcaaacatgattcatcgctcttccagctccagcaatcagacttga
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