Apteryx rowi (Okarito brown kiwi): 112967528
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Entry
112967528 CDS
T07573
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arow03036
]
112967528 (CHD9)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112967528 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
112967528
NCBI-ProteinID:
XP_025924529
Ensembl:
ENSARWG00000013399
LinkDB
All DBs
Position
Unknown
AA seq
2894 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFEQLSQYDSLKLHQVNQSFNSSADNVLSPHSQFNCSPIHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNINTGQDALSQPKDFMEVNVSTSHRVSVNHPPPVSNPSTSQQPLSVQQFSQTASASI
HFCGNQEGNFDGQSSTITPCSVNNTQQFSSPYSYSNNHISPTSLLQSTTALSSSQQTHPI
SDFTGSDAFTSQTGTKQETTEHMLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNINFP
ASAGSASQISHFTDPIESNGFTSLDENLLHQVETQSEPFTGLDPDDLLQEDLLPQFDDSA
FVQDSTSHVLEHDLEHHITPPQVTESSEIARVQSQSQIHPWHSSVSNQHLQDRSRITLQG
QPPSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGER
NIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKEGKKAKTGSSSKIKEKTKIGKLIITL
GKKQKRRNESSDELSDAKQTPRRSLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVS
VKIKKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIIKKEVSAGMTVEMEEFFVKYK
NYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEV
SLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPP
PNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYE
ILLSGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGR
IVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHK
VLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELR
KCCNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKV
LIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRAS
LKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQ
ILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGRN
SLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKN
LLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTE
DGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIK
HHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDVDADK
SLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAP
AMFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQI
QQIQPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPER
GRFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERA
SRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSR
TDYHILRDPELSFMSAQRSYSQNKVALSRTSTPLLHQYQMALSASPLTPQSRMLDAKVNA
LEDTKVKNENLKEDPQSSEGESMSTEETQTIMKSEPLSPKNGTSIQNTDHKPSVKTETDR
RMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSR
SGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEES
VASLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGK
WPSARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPSAGVKEEYDQSPQMSKVKKH
VREKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVN
FPKSLPESGTSSQLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGI
NSCQVAAGINPALAYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGY
VEDLGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPP
LKDLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIA
KATAAAAAATAASVSVNPLLANGLLPGMDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLT
TAGEAKSVAAMFPMLLSGMAGLPNLLGMGGLLTKSTESITEEKKGSDSKEADIKKERTED
QNTDIGGENSVSNSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNI
FDVQNSENNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDS
TSSSSEDSDSSDED
NT seq
8685 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgagttgaat
ttgggtgcagaatttgaacctttgcacatagactccttgaaccatgtgcaagatgctcaa
aaccaacaaaagatgagtgagtttgagcagctgagccagtatgattcactgaaacttcac
caagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcaattt
aattgttcaccaattcatccgcagaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcaaatcaaaatgggtccccc
tttcatcaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcactacggtcgcaacaa
agcagaaacaatattaacacagggcaagatgctctgagtcagccaaaagacttcatggag
gttaatgtatctacttctcacagagtcagtgttaaccacccacctccagtttctaatcca
tcaacttcacagcagcctctgtccgttcaacagttttctcaaactgcaagtgcttcaata
catttttgtgggaatcaagagggaaattttgatggacagtcctcaactattactccatgt
tctgtcaataatacccaacaattttcttctccttattcttactctaataaccacatttct
cctaccagccttcttcagtctacaacggctctttcttctagccagcagacacaccctatc
tctgacttcactggaagtgatgcctttacatctcaaacagggaccaagcaagaaacaact
gagcacatgttgaatcctaatacacctttgaattcaaatagttttcaaatgttgcattct
gcacatcctcagggcaactttagtagttcaaaactctctcctgtgaatattaattttcca
gcttctgctggttctgcgtctcagataagccatttcactgacccaattgaaagcaatggt
tttacatctttggacgagaacttacttcatcaggttgagactcaaagcgaaccatttaca
ggacttgacccagatgacctccttcaggaagaccttctaccacagtttgatgattctgcg
tttgttcaggatagcacaagccatgtcttagagcatgatctagaacaccatataacccca
ccgcaagtaacagagtcatctgaaatcgctcgagtgcagtctcaaagtcagattcatccc
tggcattcttcagtttccaatcagcatctgcaagacagaagtcgtataaccttacaagga
cagcctccttcctccaaaaagactgatggttcaggatcgtatactaagttgcagaatacc
caggtgagggcaatgtctgaaaagaagcagaagaaaaaagcagactctgaaagtaaacaa
gagaaggcaaatcgcataatatccgaagcaattgcaaaagcaaaagagagaggagagaga
aacattccgcgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagag
gaaaagaaaggaagaaaagttaaatcgaaaccaaaggacaaggagggcaaaaaggcaaaa
actggttcttcatccaaaattaaagagaaaacaaaaattggaaagctaatcatcactctg
ggtaaaaagcagaaaagaagaaacgaatcttcagatgaattgtctgatgctaagcagact
ccacggcggtcattgaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaa
aggaaaaagtatgctgaagaaggagaaggaaagcaatcggaagaggaggctaaagtttct
gtgaaaatcaaaaagagttctgctcctttacctgctgaacagcctttacaattatttgtt
gagaatccaagtgaagaagatgcagcaattgtagacaaaatcttatcctctaggataata
aagaaagaagtgtctgctggaatgacagtggaaatggaagagttttttgtaaaatacaag
aactactcctatctccactgtgaatgggccacagaacaacagcttttaaaggataaaaga
atccagcagaaaataaagcggttcaaactaaggcaggcccaaagagctcacttttttgca
gatatggaagaagaaccttttaatcctgattatgttgaagtagaccgggtattagaagtc
tctctatgtgaagacaaggacactggtgagcctgttatttactatttagtaaaatggtgt
tcattgccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaata
gaagaatttgaacagttgcaagcttccaggcctgactcgagaagattggaccgaccacct
ccaaactcttggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagg
gaatatcaactggaaggacttaactggctcctattcaactggtacaatagacgaaattgc
attttagcggatgaaatgggtcttggcaaaaccattcagtcaattacattcctctatgaa
atcctcctgtctggtataagagggccttttctgatcatagctccgctttccactataaca
aactgggaaagagaatttcgcacatggactgaccttaatgttgtagtgtatcatggaagt
atgatcagcagacagatgattcagcagtatgaaatgtacttcagggactcccagggccgc
atcgttcgaggtacatacagattccaagccattatcactacttttgaaatgattcttggt
ggctgtccagaactcaatgcaattgagtggcggtgtgttattattgatgaagcacacaga
ctgaagaacaaaaattgcaaactcttggaaggactaaagctaatgaaccttgagcataaa
gtgctgctaacaggtacaccactgcagaacacagtagaagaattatttagcctccttcat
tttcttgaaccgttgcgttttcctgctgaatctacattcatgcaagaatttggagacctt
aaaacagaggaacaggttcagaaactacaagccatcctgaaacccatgatgctcagacga
ttaaaggaagatgtagaaaaaaagttggctcctaaagaggaaactataattgaagtagaa
ctaactaatattcaaaagaaatattatcgagcaattttggagaagaattttgctttctta
tccaaaggagcagggcaagcaaatgtacccaatctagttaacactatgatggaactcaga
aagtgttgtaatcacccttatctcatcaaaggtgctgaagagaaaatccttggagagttt
aaagaaacttatagcccaagtgctcctgacttccatctacaagcaatgatccagtctgct
ggtaaattggtwcttattgataagcttcttccaaaaatgaaagcaggaggccacaaggtg
cttatcttctctcagatggtgcgctgtcttgatattttggaggattaccttatacataaa
agatacttatatgaacgaattgatggacgagtaagagggaatctgagacaagctgccatt
gaccggtttagcaaacccgattcggatcggtttgtcttcctcctctgcaccagagctggt
ggcttgggcattaatctgacagcagcagatacctgtataatttttgattctgactggaat
cctcaaaatgatctgcaggctcaagcccgttgtcacaggattggtcagaacaaagcagtg
aaggtctacagattgataacccgtaattcgtatgagagagagatgtttgacagagcaagt
ctgaaattgggactggataaggctgtcttacagagtatgagtggaagagaaaacagcgtt
ggtggtatccaacaactctctaagaaagaaatagaagatttgcttcgaagaggggcatat
ggtgccattatggatgaagaagatgaaggatctaaattctgtgaggaagacattgaccaa
attttgctacgtcgtactaaaactatcacaattgaatcagaaggaaggggctccacattt
gccaaggctagttttgttgcatctggaaacaggactgatatttcattagatgatcccaac
ttctggcagaaatgggccaaaaaagcagaaatagatattgaagccatcagtggtagaaac
agcctggttatagataccccaagaattaggaaacaaacacggccattcagtgctacaaaa
gatgagctggctgaattgtctgaagtggagagtgagggcgatgataaaccaaaactccgc
aggccttgtgaccgctccaatggatatggaagaacagagtgctttcgggtggaaaaaaac
ttactggtctatgggtggggtcgatggagagagattttgtcgcatggtcgcttcaagaga
caactaaatgaacaggatgtggagataatttgccgagctctattagcatattgtcttgtt
cactacagaggggatgagaagataaaaagttttatatgggatctcattaccccaacagaa
gatgggcaaacacgagagctgcagaatcaccttggcttatcagcccctgtgcctagggga
agaaaaggaaagaaagtgaagacccaagctagtacttttgatatacacaaagcagaatgg
cttcgaaaatataatccagaacacctattgcaagatgaaggatataaaaagcacataaaa
caccattgtaacaaggtcttgcttcgagtaagaatgctgtattatttaaaacaagaagtc
attggtaatgaattccaaaaggtgtttgatggaattgatgccagtgaaattgatgtttgg
gtccctgagccagatcactcggaagttcctgctgagtggtgggacgtggatgcggataaa
tcccttctcattggagtttttaaacatggttatgaaaagtacaacactatcagagcagat
ccagcactgtgcttcttggaaagggttggcaaaccagacgaaaaagcagttgctgctgag
cagagagcaaacgattatatggatggggatgtagaagatccagaatataaaccagcccca
gcaatgtttaaagatgacatagaggatgatgtttcatccccaggtgatctggtaatagca
gatggagatggacaaatgatggagggagacaaaatttattggcccactcagtccgcctta
acaacacgtcttcgccgcctaataacagcttatcaacgaacaagtaaaaatagacagatt
cagcagatccagccagcattcccaatacagactagtatgatgcagcctccatatgaagaa
gctgctctaaatccaaagatggctgctaagattgaaagacagcaaagatggacaagaaga
gaagaagctgacttttacagagttgtgtccacatttggagtggtgtttgatcctgaaagg
ggccgatttgattggaccaaatttagagcgatggctaggttacataagaaaactgatgag
agcttagagaagtacttgtatgcgtttatgtcaatgtgcaggagagtctgtcgtcttccc
tcaaaagaagagctcgtagacccaaacatctttatccaaccaattacagaggagcgtgct
tctcggactttgtatcgcattgagcttctaaggaaagtgcgagaacaggctcttcgacac
ccacagttgtttgaacgactaaaactatgccagccgaacccagacttgcctgtctggtgg
gagtgtgggactcatgacagggatttacttattggagctgctaaacatggagttagcagg
acagactatcatattcttcgtgatcctgaactgtcatttatgtctgcccagaggagctat
agtcagaacaaagtggcactctcaaggacttctactcccctcttgcatcaatatcagatg
gcattgtctgcttctcctcttacacctcagtcaagaatgctggatgctaaagtgaatgct
cttgaggatacaaaagttaaaaatgaaaatctgaaagaggaccctcagtcttctgaaggg
gaatctatgtctacagaggagacacaaacaataatgaaatctgaacctttgagtccaaaa
aatggcacatcaatacaaaatacagaccacaaacctagcgtgaagactgaaacagacagg
cgcatggttgcagcaaggacagagcctctaactccaaacccagcctccaaaaaacagaga
gtcagcaaaagaggatctgattccagctcggactcagactcggactcagatagatcatcc
tgttcttccaggtcatcatcttcatcctcttcatcttcctcatcttgttcacactctcga
tcaggctctagctcctcgtcatcttcatcttgttcttcagcctcctcctcatcctcctcc
tcctcctcatcctcctcctcgtcatcatcgtcatcgtctgaggagagtgatagtgatgaa
gaggaggcgcaaaaacgtgcagaaggaacccctcatataaaagcctacgatgaagaaagt
gtcgcttctctgagtacaacacaggatgaaacccaggacagtttccagatgaacaacggg
acaccaaattccagttatctcctacaaggtggatacatgttggctgcatcctattggcca
aaggatcgagttatgattaatcggcttgatagtatttgtcaaacagtgttgaaaggtaaa
tggccttcagcaagaaggagttatgacagcaatacagtggcatctttctatacaaccaaa
ctcctggatagcccgggtgcagctgcagactacagtgaacccagtgcaccaacaccccct
agtgcaggtgttaaagaagaatatgatcaatcaccacagatgtcaaaggtgaagaagcat
gtacgagaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgactttt
cagaagcagggactgtctcagaaaaggccatttgaaagtgaggaaggtgcactgggacag
cagcaatacctggctcggcttcgtgaactccagaatgcttcagagaccagtcttgtcaac
ttccccaaatcactaccagaatcaggtacttccagtcagttaacagctagtgccaatgga
gtgatagttgacagtcagcctgtagtgaaaaagagaagaggaagaaggaagaatgtggag
ggagtcgatgtcctctttataaatagaaataaacagcctaatcatgttaatccaggtatt
aactcctgtcaagttgctgcaggaataaacccagcgctcgcttacactcagtcccaaggc
atgcttgatgcagagagtccagttcctgttattaacctaaaagacggaacaaggcttgca
ggtgatgatgccccaaaaagaaaagatttagaaaagtggcttaaggaacatcctggctat
gttgaagatttaggagcttgtattcctagaatgcagctgcatgatgggaggcccaaacaa
aaaagacaccgttgtcgaaaccctaataaactggacgttaatagtctgactggtgaagaa
cgtgttcagctcataaatagaagaaatgcaagaaaggtggggggtgcatttgctccccct
ctgaaggatttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgaatgg
ggagaagttgtaaaacagtctggatttcttccagaaggtatgttcgaccgtattctcaca
gggcctgttgtgcgggaagaagtaagccggagaggaagacggccgaagagtgagattgcc
aaggcaacagcagctgcagcggccgcaacagcagccagcgtatcagttaaccctctgcta
gccaacgggttgctgccgggcatggatctgcccagcctgcaggccctgcagcaaaacctg
caaaatctgcagtcgctgcaagtcacggcgggcttaatgggcatgccggcgggcttaacc
actgccggggaagccaagagcgtggctgccatgttccccatgctgctgtcggggatggct
ggattaccaaacttgctgggcatgggcggacttctcacaaagtctacagaatctattaca
gaggagaaaaagggaagcgattcaaaggaggcagatataaagaaagaaaggacagaagac
caaaatacagatattggtggtgaaaactctgtttcaaattctccttcaacatcctctgct
gctgcagctgccaaccctctatctcttaacccattacttttgtccaacatactttatcca
gggatgcttctcactccaggccttaatcttcatatcccagctttgtctcagtccaatatt
tttgatgtacagaacagtgaaaacaatgacacaggctcagccaagcccacagaagaaaaa
gaggaaaattctagggttagagatcaggaagacaaagggggaacagagccaagctctcac
aatgaaaacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagt
acatcgtcttcgtctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
