KEGG   Apteryx rowi (Okarito brown kiwi): 112967736
Entry
112967736         CDS       T07573                                 
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow04137  Mitophagy - animal
arow04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:arow00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112967736 (VCP)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    112967736 (VCP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arow03019]
    112967736 (VCP)
   03009 Ribosome biogenesis [BR:arow03009]
    112967736 (VCP)
   04131 Membrane trafficking [BR:arow04131]
    112967736 (VCP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arow04147]
    112967736 (VCP)
Messenger RNA biogenesis [BR:arow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     112967736 (VCP)
Ribosome biogenesis [BR:arow03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    112967736 (VCP)
Membrane trafficking [BR:arow04131]
 SNARE
  SNARE associated proteins
   Others
    112967736 (VCP)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    112967736 (VCP)
Exosome [BR:arow04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112967736 (VCP)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 AAA_22 TIP49 AAA_14 NPHP3_N RNA_helicase Vps4_C AAA_28 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 ATPase_2 IstB_IS21 AAA_7 AAA_18 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII NACHT Sigma54_activat Viral_helicase1 SLFN-g3_helicase KAP_NTPase Zot DUF3944
Other DBs
NCBI-GeneID: 112967736
NCBI-ProteinID: XP_025924967
Ensembl: ENSARWG00000016542
LinkDB
Position
Unknown
AA seq 761 aa
MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC
PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG
HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR
ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA
RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI
PLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES
EIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS
RGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq 2286 nt   +upstreamnt  +downstreamnt
atggatgaattgcaactgttcagaggagacactgttctgctaaaaggaaagaagaggaga
gaagcagtttgcattgtcctgtcagatgatacctgctcagatgagaagattcgcatgaat
agggttgttcgcaacaacctgagagtgcgcctgggtgatgtgatcagcatccagccttgc
ccagatgtgaagtatggcaaacgtatccatgtgctgccaattgatgacacagtagaaggc
attacaggaaatctgtttgaggtctacctcaaaccgtacttcttggaagcatacagaccc
atcaggaaaggtgacatcttcctggtgcgtggagggatgcgtgcagtggagttcaaagtg
gtggagacagatccaagtccttactgcatagtggctccggacacagtgatccattgtgaa
ggagagcccatcaaacgagaggatgaggaagagtcactgaatgaagtgggctatgatgac
attggtggctgccggaagcagctggctcaaatcaaagagatggtggaacttccactccga
caccctgcactcttcaaggcaataggagtaaagcctccccgtggaattctgctgtatggt
cctcctggcactggtaaaacactgattgcccgagcggtggccaacgaaactggggctttc
ttcttcctgatcaatggtcctgagatcatgagcaagctggctggtgagtctgagagcaac
ctgaggaaagcctttgaagaagcagaaaagaacgctcctgccatcatcttcattgatgaa
ctggatgcaattgctccaaagagagagaagacacatggagaggtggaacgtcgcatagtg
tctcagctgttgactcttatggatggactgaaacagagggcacatgtgattgttatggca
gctaccaacagacctaacagcattgacccagcactcaggcgatttggtcgttttgacaga
gaggtagatattggtattccggatgccactgggcgcctggagatcctgcagatccacaca
aaaaatatgaaactggctgatgatgtggatctggagcaggtggcaaatgagacccatggc
catgttggtgctgacttggctgctctttgctcagaagctgctcttcaggctatcagaaag
aagatggatctcatagacctagaagatgaaaccatcgacgctgaagtgatgaactctctg
gctgtgaccatggatgacttcaggtgggctctaagccagagcaatccttccgctcttcgg
gagactgtggtggaggtgccacaagttacctgggaagatattggtggcctagaagatgta
aagagagaactccaggagcttgtacagtatcctgtggagcacccagacaagttcctcaaa
tttggcatgactccatccaaaggggttctgttctatgggccacctggttgtggtaagaca
ctgctggccaaagccattgccaatgaatgccaggcaaacttcatttccatcaaggggccg
gagctgcttaccatgtggtttggcgagtctgaagccaatgtgcgcgagatctttgacaag
gcccgccaagcagccccttgtgtgctcttctttgatgagctggactccattgcaaaggct
cgaggtgggaatatcggagatggtggtggtgctgcagaccgtgtcattaaccagattctg
acagagatggacggtatgtccaccaagaagaacgtcttcatcattggtgccaccaacaga
ccagacatcattgacccagccatcttgcgccctggccgtctggatcaactcatctacatc
cccctgcctgatgagaagtcccgggtggctattcttaaagccaacctgaggaaatcacca
gttgccaaggatgtcgacctggatttcctagcgaagatgaccaatggcttttcgggagct
gatctgacagagatttgtcagcgtgcctgcaaactggccatccgtgagtccattgagagt
gagatcaggcgagaacgtgagaggcaaaccaacccttccgccatggaagtggaggaggat
gacccggttcccgagatacgcagggatcactttgaggaggccatgcgctttgctcgccgc
tccgtcagtgacaacgacatcaggaaatatgagatgtttgcacagactctacagcagagc
cgtggctttggcagcttcaggttcccatcaggtaaccagggaggcgctggtccaagccaa
ggcacaggaggtggcagcgggggcaacgtgtacagtgaagacaatgatgatgatctctac
ggttaa

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