Apteryx rowi (Okarito brown kiwi): 112967770
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Entry
112967770 CDS
T07573
Symbol
SHH
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112967770 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arow01002
]
112967770 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arow00536
]
112967770 (SHH)
Peptidases and inhibitors [BR:
arow01002
]
Cysteine peptidases
Family C46: hedgehog family
112967770 (SHH)
Glycosaminoglycan binding proteins [BR:
arow00536
]
Heparan sulfate / Heparin
Morphogens
112967770 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hint
HH_signal
Motif
Other DBs
NCBI-GeneID:
112967770
NCBI-ProteinID:
XP_025925055
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQVEPQRYLYLCLLTSLSN
PKGRICLSIFERGVKQPRRCSALAGRAGQVLPCAGSVRAECTPSRGWRTGKEKLSPSATR
ASPXGRDSPGSGPRLGQAGSPALTPVCLSPCTENSVAAKSGGCFPGSATVHLEQGGTKLV
KDLSPGDRVLAADAQGRLLYSDFLAFLDREDGSPKLFYAIETRQPQARLLLTAAHLLFVA
PQHNQSQAEAARSRALFASRVRPGQRVYVLGEGGRQLLPAAVHRVWLQEEASGAYAPLTA
QGTILIDRVLASCYAVIEEHGWAHWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHW
YSRLLYRIGSWVLDSDSLHPLGMAVPAS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggaggcaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcaggtagagccacagagatacctgtatttgtgtttgttaacctctctgagcaat
cctaaaggacgcatctgtcttagtatttttgaaagaggggttaagcagcccagacgttgc
agcgcgttggcagggagggcaggccaggtccttccctgcgccggttcagtaagagcagag
tgcacccctagccgaggctggaggacaggcaaggagaagctctctccctcggccacccgt
gcctctcccgygggtagggacagcccgggaagcggcccgcgcctgggccaggcgggcagc
ccggcgctaacccccgtgtgcctctctccttgcacagagaactcggtggcggccaaatcg
gggggctgcttccccggctcggccacggtgcacctggagcaaggcggcaccaagctggtg
aaggacctgagccccggggaccgcgtgctggcggccgacgcgcagggccggctgctctac
agcgacttcctcgccttcctggaccgcgaggacggctcgcccaagctcttctacgccatc
gagacgcggcagccccaggcccggctgctgctcacggccgcccacctgctcttcgtggcc
ccccagcacaaccagtcgcaggcggaggcggcccggagccgggcgctcttcgccagccgc
gtgcggccgggccagcgggtctacgtgctgggcgagggcgggcggcagctgctgccggcg
gccgtgcaccgcgtgtggctgcaggaggaggcctcgggggcgtacgccccgctcaccgcc
cagggcaccatcctcatcgaccgcgtgctggcctcctgctacgccgtcatcgaggagcac
ggctgggcgcactgggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctccactgg
tactcgcgcctcctctaccgcatcggcagctgggtgctggatagtgactccctgcacccg
ctgggcatggcggtgccggccagctga
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