Apteryx rowi (Okarito brown kiwi): 112967940
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Entry
112967940 CDS
T07573
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arow03016
]
112967940 (TRUB1)
Enzymes [BR:
arow01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112967940 (TRUB1)
Transfer RNA biogenesis [BR:
arow03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112967940 (TRUB1)
Prokaryotic type
112967940 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
112967940
NCBI-ProteinID:
XP_025925449
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MGFNEPGCTHLAWREELVLLFNNMSKKSLGEAVQHGQQQEVEAGVQTNRNKRKKQILKIG
HGGTLDSAATGVLVVGIGKGTKMLRAILAGSKKYTAIGXLGKATDTLDATGKVTEEKPYD
KITKGDLENVLQKFTGDIMQVPPLYCGSTVTAVRSVIRYSALKKDGQRLSSLIKRGEAVE
AKPARPVRVYSLSLQRFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASVQELTRTKQG
PFTLEEHALYEDKWTIDEIARSLERCTSLLPGEPSHKKFKTEDSGETAVSCEDKQKLGQG
ERLND
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaatgaacccggctgcacgcatttggcctggagagaggagctggtgctgctc
tttaataatatgagcaagaagagtttaggggaggctgtccagcatggtcagcagcaggaa
gtagaagctggtgtgcaaacaaataggaacaaaagaaagaaacagattttgaaaattgga
catggtggaactttggacagtgcagctacaggagttctggtggttggtattggaaaagga
acaaaaatgctgagagctatattggcaggttccaagaagtacactgccattggacractg
ggcaaagctactgatacattagatgctacaggaaaagtaactgaagaaaaaccttatgat
aagataacaaaaggagatcttgaaaatgtgctgcaaaagttcacaggggacataatgcag
gttcctccactttactgtggttccactgtgactgctgtaaggtcagttattcgctattct
gctttgaagaaggatggacaaaggctatcaagtctgataaagagaggagaagcagttgaa
gcaaagcctgctcggccagtaagagtgtacagcctctctctccaacgcttccagccacca
ctgttcacactggatgttgaatgtggtggtggcttttatgtcaggagcctggtcagtgac
attggcaaagaactctctacctgtgccagtgtgcaagagctgacccgaaccaaacagggg
ccatttacactagaggagcatgcactttatgaagacaaatggacaattgatgaaattgca
cgatccttagagcgttgcacgtctcttctcccaggagagccatctcataaaaaatttaag
acagaggattctggagaaactgctgtgagctgtgaagataagcaaaagttgggtcaagga
gaaagactgaatgattga
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