Apteryx rowi (Okarito brown kiwi): 112968100
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Entry
112968100 CDS
T07573
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arow03036
]
112968100 (JMJD1C)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
112968100 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
Tudor_KDM3B
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
112968100
NCBI-ProteinID:
XP_025925746
Ensembl:
ENSARWG00000001244
LinkDB
All DBs
Position
Unknown
AA seq
2322 aa
AA seq
DB search
MVVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTR
AQANSPRPAMNSQTAAPKQNSHQHQQQRNTRPNKRKGSDSSMPDEEKMKEERYDCIGRGE
NPKNKNKHFLSKRRKPEEDEKKLNMKRLRTDNISDYSESSDSEISNKRLTDSSSEQNSEN
ELKSKNTSKINGEEGKSQTIEGLEEQTLTDRQSPWDEIQDDKKREETERLKSSVLDQQEK
SSLHAAEQPTSYEQNAKDPHVQECSAEKHHTVELKNEQFVPRPPTPKCGVEITNENNSEK
ENQNNSASTFGLQTVQKIESHGSDLKQQLANANFLETRKQETDQSWVSNVVNKTDLIQPG
VVKTLPVTEHLNPEKEKVPYGSFMSSLNVASLAEESKLHKQSPVPDSVKSKPSASVDHPK
TKSPDVKPKFTQSSDTVKSKVSSQNSHATGLTRSANKTEHDLPRSSFHPVPARVSALEAT
KSPLIIDKNEHFTVYRDPTLIGQETGANHISPYLHQHNYPLHSSSHRTCLNPNAHHPALT
GSSHLLSGSSTQTPLSAINTHPLSTASHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAH
ASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLP
SSKWVHPETPVNAEASLRRNTPSPWLHQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLT
THSSPPLSKSIVEHHKEELERKAFIEPLRSVTTAPIKTELEQSRTQTAKESHMHRHFADP
MLNQLPRPPQETGERLSKYKEEHRRILQESIEVAPFTAKIKALEGERESYSRVTSLSSSP
KSHSVKYDKDAERSVSELYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEASNVYV
DKQTNCPSTAASPQSLPSYISSLSKPPPLIKHQPESEGSASKIAEQLSQSVQSHSVTSFR
NDSRSPTQLSVSSSNTLRSMPALHRAPVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNT
GGGKIQELQKPPTLVPEPKEAQTVYKGISEQNLSEIWKSNNAQNNEKVEWHVERMSGKSQ
SATASVIVRPPSSTKYDSVPVMQSASKDRVSERSSAVTNQTDCLKTAEARETGRVILPNM
NSDSTRTQYEKKFPAVSQGSLPSSVTPTTTMNCSTKTDVTTSAATTTSVSSWGSSEVTYS
LSSAVLACAPLECAASRAASQAAAQAPECKASTAAPVALGGGKAGSAAQPSSGFSTSTDF
VHLKKHKAALAAAQFKSSNTSETESNSVKNQTFSTSLSLDSTIVCNTINKANSVGSGQAS
QTSQPNYHTKLKKAWLTRHSEEDKNTNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNID
SKILADKFVKEDKHPRRKAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQK
KKGDAEEEVKPNGVLSRSAKEKSKLKLQSSSNSTGIPRSVLKDWRKVKKLKQTGESFLQD
DSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQ
YDDEALSLWTHENYEDDELDLETSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRA
VRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHD
HKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQCTTKQSTQAGKLPAMNGVSQVLQN
VLNHSNKISLCMPESQQQNTPPKSETNGNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQ
KAREEKKENKECPSGKHSKEEKDQDNSESPNCKTSPPASQNNEQGSTLRDLLTTTAGKLR
LGSTDAGIAFAPVYSTGTPSGKSGRTMPNILDDIIASVVENKIPPNRTPKINAKSEIKDE
PKDDKKCILDDCSKLYNDIQYSWICDKHVLWLRDHKNSNNWKLFKECWKQGRPVVVSGMH
KKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNVKEFWDGFEDVSKRQKIKNGETAL
LKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCS
AYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRK
RLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQR
LFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELR
LSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEMEDMEEN
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atggttgttatgaatgaccaggtgttagaacctcaaaatgttgatccttctatggttcag
atgacctttctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcact
tcacgccgaaggtctcgttccaaccagaacagcaacacagttcatggtcattatacacgt
gcgcaagcaaatagtcccagaccagcaatgaattcccaaactgcagcaccaaaacagaat
tcacaccagcaccagcagcagcgcaatactcggccaaacaaaaggaaaggctccgatagc
agcatgcctgacgaagagaagatgaaagaagagagatacgattgtattggtcgaggagaa
aatcccaaaaacaaaaataaacacttccttagtaaaagaagaaaacctgaagaggatgaa
aaaaaattaaatatgaagagactgcggacagacaatatctcagattactctgagagcagt
gactcagaaatttcaaataaaagattaacagattcatcctcagagcaaaattcagaaaat
gagttaaaaagcaagaacacttcaaagataaatggagaagaaggaaaatcccaaactatt
gagggattggaagaacagacactaacagataggcaatctccatgggatgaaatacaggac
gataaaaaacgtgaagagacagaaagactgaagtcatctgtcttggatcagcaggaaaag
tcttcactccatgcagcagagcagccaacatcttatgagcagaacgccaaggatccacat
gttcaagagtgcagtgcagaaaaacatcatactgtggaattaaaaaatgagcagtttgta
cccagacctcctactccaaaatgtggtgttgaaataactaatgaaaacaactctgaaaaa
gagaatcagaataattctgcaagtacctttggtttgcaaacggttcagaaaatagaatct
cacggcagtgatttaaaacagcagttagcaaatgcaaatttccttgaaacaagaaaacag
gaaactgatcaaagttgggtgagcaatgttgttaacaagacagatttgatacaacctggg
gttgtgaaaaccttaccagtaactgaacatttaaatcctgaaaaagaaaaagtgccgtat
ggctcatttatgtcttcgttaaatgtagcttctctagcagaagaaagtaaactacataaa
caaagtccagtccctgattctgtgaagtcaaaacctagtgcttcagttgatcatcctaaa
acaaagtcacctgatgttaagcctaaattcacccaatcttctgatactgtgaagtctaag
gttagttcccaaaacagccatgctactggattaacaaggtcagccaataaaactgagcat
gatttgccaaggtctagtttccatccagttccagctagagttagtgctctagaagctact
aaaagtcctcttatcattgacaagaacgaacatttcacagtatacagggaccccactctg
attggacaagaaacaggagctaatcacatttcaccttatttgcatcagcataattatcca
ctgcattcctcatcccaccgaacctgtttaaatccaaatgctcatcatcctgcattaact
ggttcatcccatctgttatctgggtcttcaactcagaccccattgtccgctattaacact
catcctcttagtaccgcatctcaccattctgttcatcaccctcatctacttcctgcagtg
ttacccggagtgcctactgcctccttgctgggtggccatccacgactagagactgctcac
gctagcagcttaagccatttggcattagcacaccagcagcagcaacagatgttacaacac
cagtctccacatcttcttggacaagctcatccttctgcttcctataatcagctagggctt
tatccaattatttggcagtacccaaacggaacacatgcttactcaggactcggtctgccc
tcctcgaaatgggtccaccctgaaactcctgttaacgcagaggcttccttgagaaggaat
actccgagcccgtggttgcaccagcccacccctgtgacctcagccgacagtctcggttta
ctgagtcacattcctgtgagaccatccagcgctgatccccttcggcctctcaagctgaca
acgcactctagtccgcccttgtccaaaagtatagtagagcatcacaaagaagaactggag
aggaaggcgtttattgaacctttacgttccgttacaactgcgcccataaagactgagcta
gagcaaagcagaacgcagacagcaaaggagagccatatgcacaggcattttgcagatccc
atgttgaaccagctgccaaggccaccgcaggagactggggagcgactaagcaaatacaaa
gaggagcacaggcgaatactccaagaaagtattgaggttgctccttttacagctaaaata
aaggcactggagggggagagagagagctattccagggtaacatccttatcttcaagtccc
aaaagccattcagtaaaatatgacaaagatgcagagcgctctgtatcagaactgtataag
atgaagcattcagtcccacagagtttgccgcagagtaactatttcaccaccctgtctaac
agtgtagtaaatgaaccaccaagatcatacccatccaaggaagcttcaaatgtctatgtt
gataagcagactaattgtccttcgacagcagctagtccccagtctctcccttcttacatt
tcttctctttccaaacctccccctttaataaagcaccaaccagagagcgaaggctctgca
agcaagatagctgagcagctttcacagtcagtgcagtctcactcagtaacttcttttaga
aatgacagcaggagccctactcagctgtcagtctcatcttcaaacacactccggagtatg
cctgccttgcacagagccccagtgtttcaccctccggttcaccagaacctggagaagaag
gaaagcagctacagcagcctgtcgcctccgactctaactcctgttcaacctgttaacact
ggtggcggcaaaatacaggaattacaaaagccgccaactttagtacctgaaccgaaggaa
gctcagacggtttacaagggcatttctgaacaaaacttgtcagaaatatggaagtctaat
aatgctcaaaataatgaaaaagtggaatggcacgttgaaagaatgagtggaaagtcacag
tcggctacagcatctgttattgtacgtcctccttctagtacgaaatacgatagtgtacca
gtaatgcagtcggcttccaaagatcgagttagcgagagatcttcagctgtgacaaatcaa
acagattgcctgaaaacagcggaagccagagagactgggagagtcattctgccaaatatg
aactcagacagtactcgtacacagtatgaaaagaaatttccagctgtctcgcaaggcagc
cttcctagctctgtcacccccaccacaactatgaactgcagtaccaaaacggatgtaacc
acatcagcagctacaactaccagcgtgtcaagctggggtagttcagaagtgacttactcc
ttatcaagcgcggtcctggcctgcgcgccgctggagtgtgctgcctcgagagccgccagc
caggcagcggcgcaggccccggagtgcaaggccagcactgcggctccagttgcgctgggc
ggtggcaaggccgggagcgctgcgcagcccagctcgggattctccacctcgactgatttt
gtccacttgaaaaagcacaaggcagcgttggctgcagctcagtttaaaagtagtaacacc
agtgagactgagtccaactctgtgaaaaatcagacattttcaacctctctctccctagac
agcactatcgtctgtaatacaataaacaaagcaaactctgtaggcagtgggcaggcttcc
cagacaagtcagccaaactaccacactaaactgaaaaaggcttggctaacaagacattcg
gaggaagataaaaacactaataaaaaagagaattcagggaacagtgtttcagaaattatt
aagccatgtactgtcaatttgatagcttctacatcaaatgatttgcaaaataacatagat
agtaaaatcctggcagataagtttgtgaaagaagataagcaccctaggagaaaagcaaaa
agaacttatgagtctggctctgaaagcggagactctgatgaaagcgagagcaagtcagag
caaaggactaaacggcagcccaagccaacttacaaaaagaaacaaaatgatttgcagaaa
aaaaagggtgatgcagaggaagaagtaaaaccgaatggtgttcttagtaggagtgccaaa
gaaaaaagcaagctgaagttacagagcagcagtaatagcactggtatacctcgctcagta
ttaaaagattggcgcaaagtaaagaagctgaagcaaacaggagagtcctttttgcaggat
gattcttgctctgaaataggaccgaatttgcaaaaatgcagagaatgtaggttaataaga
agtaaaaaaggtgaagaaccaactcactcaccagtattttgtagattttattactttcgg
cggttatcttttagtaagaacggagtggttaggatagatggtttctcctctcctgatcaa
tatgatgatgaagcactgagtttatggacacatgaaaattatgaagatgatgaactggac
ctagaaacttctaagtacattttagatatcataggtgataagttctgtcagttagtaacg
tctgagaaaacagccatgtcctgggtgaaaaaagatgccaaaattgcgtggaagagagca
gtgagaggagtccgcgagatgtgtgatgcatgcgaagccacattatttaacattcactgg
gtctgccaaaaatgtggatttgtggtctgcctggattgttacaaggcaaaggaaagaaaa
agctctagagataaggagctgtatgcctggatgaagtgcgtgaagggacagcctcacgac
cacaaacacttgatgccaactcaaattattcccggctctgttttgacagatcttctagat
gctatgcacaatattagagaaaaatttgaaattaaatcccactgtcagtgtaccaccaaa
cagagcacgcaagctggcaaactccctgcaatgaatggtgtgtctcaggttttacagaat
gtcctcaatcacagtaataaaatttctctgtgcatgcctgagtctcaacagcagaatacc
cccccaaagtctgagacaaatggtaatacaagtccaaggagtgatgtaagcacagacagc
aagttaacaccacctgaatcacagtcgccactgcattggttagctgatcttgcagagcag
aaagccagagaagaaaagaaagagaataaagaatgtccttctggaaaacattcaaaggaa
gaaaaagaccaggataattcagagtccccaaactgtaaaacctcccctcctgcatcccag
aacaacgagcagggttcaaccttacgagatttactaactacaacagcaggcaaactgcgt
ctaggttctacagatgcgggtattgcttttgctccagtttactccacaggaacaccaagt
ggcaagagtggaaggactatgccaaacattctcgatgacataattgcttcagtggtagaa
aacaagattccaccaaatagaacaccaaagataaatgcaaaatctgaaataaaagatgag
ccaaaggatgataaaaaatgtattctagatgactgcagtaaattgtacaatgatattcaa
tattcttggatctgtgataagcatgttttgtggctcagagaccataaaaacagcaacaac
tggaagctcttcaaagagtgctggaaacaagggaggcctgtagtagtgtccggtatgcat
aagaaaatgaacttcagcttgtggaaagcagagtcaattagtctagattttggaaaccag
caagctgatatcttgaattgcaaagacagcattatttcaaacaccaatgtcaaggagttc
tgggatggttttgaagatgtttcaaaacggcagaaaataaaaaatggggaaacagctcta
ctaaaattgaaagattggccttctggtgaagatttcaaggctatgatgccagcaagatat
gaagacttattaaaaagtttacctttgcctgaatattgtagtccagaaggaaaattaaac
ttggcctctcatctgccaggattttttgtccgtccagatttgggacccagactatgcagt
gcatatggtgtggctgctactaaagatcacgatataggaactacaaatctccatattgaa
gtttctgatgtagtgaacatccttgtttatgttggcatagcaaaaggaaatggagtactt
tccaaatcaggagtgttgaagaagtttgaagaggaagatttggatgatcttttaaggaag
agattgaaagattcaagtgaattacctggtgctttgtggcacatttatgctggcaaagat
gctgacaagataagggagtttctgcaaaagatagcaaaagaacaaggcctagaagtttta
ccagagcatgatccaatacgtgatcagagttggtatgtgaacaaaaaacttcgccaaaga
ctttttgaagaatatggagtaaaaacctgtacggttattcagtttcttggtgatgctatt
attctaccagcaggagcacttcatcaggtgcaaaattttcacagctgtgttcaagtaact
gaagactttgtgtctcccgaacaccttgtacagtcatttcacttaacgcaggaactgagg
ctgtcaaaggaagaaatcaattacgatgataaactgcaggttaaaaatatcttgtatcat
gcagttaaagaaatggtgagagctttgaagattcatgaaggggaaatggaagatatggaa
gaaaactaa
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integrated database retrieval system
