Apteryx rowi (Okarito brown kiwi): 112968420 Help Entry 112968420         CDS       T07573                                  Symbol PCDH1 Name (RefSeq) protocadherin-1   KO K16498   protocadherin delta 1 Organism arow  Apteryx rowi (Okarito brown kiwi) Pathway arow03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:arow00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     112968420 (PCDH1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:arow01009]     112968420 (PCDH1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:arow04515]     112968420 (PCDH1) Protein phosphatases and associated proteins [BR:arow01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      112968420 (PCDH1) Cell adhesion molecules [BR:arow04515]  Cadherins   Protocadherins    112968420 (PCDH1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_FAT4_N Cadherin_2 Cadherin_CELSR2_9th TMEM154 Mid2 MLANA Motif Other DBs NCBI-GeneID:  112968420 NCBI-ProteinID:  XP_025926449 LinkDB All DBs Position Unknown AA seq 1225 aa AA seqDB search MQTPVDHRARGRHGAQRRPHPTPLQCRMKPLASCLGLWLLFQLPALVSGTRVVYKVQEEQ PPNTLIGSLASDYGFPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLP GEPCFLEFEVSITDLMMNSSPRLLEGQIEVLDINDNTPNFASPVIPLSIHENTNIGALFS IPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDL TIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPIGHSVLQVKANDSD QGANAEIDYSFHQASDMVRRLLRLDRTTGLITVQGPIDREDVSILKFSVMAKDKGANPKS ARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENA VVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSS TNSLKVQVVDVNDNAPVFSQSSTEVSFPENNEPDDLVMEVSASDADSGSNAELVYSLVMD PSSKGSFTIDPDSGEIRVKAMLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDN DPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTIL SSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILP HTSPGQQVSKVKAEDIDSGVNAELTYSITGGNPFELFQISPHSGDITLEKEILRKHHGLH RLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSK QRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQTSKSGKS KNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHY RSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKY TNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHY ERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPNRRPKNAL KLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEI PLTQTSDFQPATTPSSQTTKREIYL NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atgcagacgcccgtggatcaccgcgcaaggggccggcacggagcgcagcgccgtccgcat ccaactcccctgcagtgcaggatgaaaccactagcatcctgcctgggcctgtggcttctc ttccagctccctgccctggtctctgggacacgtgtggtctacaaagtgcaggaggaacaa ccacccaacacgctaataggaagcctggcctctgactacggcttcccagacatggggcac ctctacaagctggaagtgggggccccctatctacgtgtggatggcaagactggggacatc tacaccacagagacctccattgaccgggagagcttgcgtgagtgccagcacctcctacct ggagagccctgcttcctggagttcgaagtgtccatcactgacctgatgatgaacagtagc ccacgccttcttgaggggcagatagaggtgcttgatatcaatgacaacactcccaacttc gcctcacctgttatccccctgtctatccatgagaacaccaacattggggcactcttctcc atccccctggccatggaccgggactcgggtcccaatggcgtcgcctcctatgagctgatg gctggccctgaggcacaggagctctttgggctgcaggtggctgaggatcaggatgagaag cagccacagctgattgtcatggggaacctggaccgggagcagtgggactcctacgacctg accatcaaagtgcaggacggaggcaacccgccacgggcaagcagtgccctgctacgcatc accatcctggacatgaatgacaacgcgcccaagtttgagaaggccctgtatgaggcagaa ctctctgaaaacagtcccatagggcactctgtcctccaggtgaaagccaacgactcagac cagggcgccaatgccgaaattgactactccttccaccaggcctcagacatggtgcgccgc ctgctgcgccttgaccgcaccacagggctcatcactgtgcaggggcccattgaccgggag gacgtcagcatcctcaagttctccgtcatggccaaggataagggggccaaccccaagagc gcccgcacccaggtggtggtcaccatcaaagacatgaatgacaacgctccctccatagag atccggggcattgggcttgtcacccaccaggatggcatggcgaacatctcagaggatgtg ccagtagagacagctgtggctctggtgcaggtatctgatcgagatgaaggtgaaaatgct gttgttacctgtgtggtagctggtgatgtcccattccagctgcggcaggccagtgaaaca ggaagcgacagcaagaagaaatacttcctgcagaccaccacaccgctggactatgagtcg gtgaaggaatacacaattgagattgttgcagtggactcggggaacccacccctctccagc accaactcccttaaggtgcaggtggtagatgtgaatgacaacgcacccgtcttcagccag agctccactgaggtgtccttccctgagaacaatgagcccgatgacctggtgatggaggtg agtgccagtgatgctgacagcggctccaatgccgagctggtttactccctggtgatggac ccctcctccaagggctctttcaccattgaccccgactctggggagatccgagtgaaggca atgctggaccgagaacagcgggaacgctatgaattcttggtggtggcagcagacaagggc agccccagcctcaagggcacagcgtctgtggccatcaacgtcatggacaggaatgacaac gaccccaagttcatgctgagcggctacaacttctcagtgatggagaacatgccgcccctc agccctgtgggcatggtgacggtgattgatgctgacaaaggagaaaatgcccgcatccaa ctgtctgtggagcaagacaatggggattttgtgattcagaatggcactggcaccatccta tccagcatctcctttgaccgggaacagcaaagtacgtacacattccgactcaaggctgtg gatggtggggaccctcctaggtccgcttatgtgggggtgaccatcaatgtgttggatgag aatgataatgccccctttatcacttcaccttccaatgccacctacaaacacatcctgccc cacaccagtcctggtcagcaagtgagcaaggtcaaggcagaggacattgactctggtgtc aatgcggagctgacctacagcatcacaggaggcaacccctttgagctcttccagatctcc ccgcacagtggagacatcaccctggagaaggagatcctgcgcaagcaccacggcctgcac cgcttggtggtgcgcgtcaatgacaagggcaagccctcacggcatggcacagcactggtg cacttctacgtcaatgagacgctggccaaccgcaccctgctggacacactggtgggacac agcctggacacacctcttgacatagacattgctggtgaccctgaatatgagcgcagcaag caacgaagcaacattctcttcggagtcattgctggcatcgtggctgtcaccctggtcatc gtgctggttgtcctggtgcgctactgtcggcagcgggaggccaagagtggctaccaggca ggcaagaaggagacgaaggacctgtatgcacctaagcagaccagcaagagtggtaagagt aagaataaagtgaagaagagcaagtccccaaagccacccaagcccacagaggatgaggag gagacagggctgcagaaatcactcaagttcaacctcatgaatgactccgtcagcgatagc ccccgcatccacctgcccctcaactacccaccagggagcccggacctggggcgccactac cgctccaactcacctctaccctccatccagctgcagcctcagtcgccctctgcttccaag aagcaccaagtggtgcaggacctgccagccaccaacacctttgttggcaccggggataac aactcgacaggctccgaacagtactcggactacagctaccgcaccaatccccagaaatac accaacaagcagttacctcatcgccgagtgacgttctctgcagccagccaggcccaagac ctgcaggatccctcccagcatagttattatgacagcgggctggaggagtcagagacccca agcagcaagtcatcgtcagggccccgcattgggcctctagccctgcctgaggatcactat gaacgcaccacacctgacggcagcatcggggaaatggagcaccctgagaacgatctccga cctctgcctgatgtagccatgactgggacctgtacccgggaatgcacagagttcggccac tccgacacctgctggatgcctggccagtcctcccccaatcgcaggcccaagaacgccctc aaactctccacttttgtgccttaccaagatagagggagtcaagagcaagtcgggaatggc agccccagactctcagaagagcgcagcaccaaaatggccaacctccgcctgctccccacg tacagtgccttctccaatagtagccatgagccctgcaaggactctcccatggaggaaatt cctctcacccagacctcggacttccagccagccactaccccctcatcccaaaccaccaag agggagatatacctgtga

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