Apteryx rowi (Okarito brown kiwi): 112968459
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Entry
112968459 CDS
T07573
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03250
Viral life cycle - HIV-1
arow04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112968459 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
112968459 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arow03400
]
112968459 (SAMHD1)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112968459 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
112968459
NCBI-ProteinID:
XP_025926520
Ensembl:
ENSARWG00000000425
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MLLDLPACALEITRVCLPAERLKVLACLNKLRQQHVDIMKVFNDPIHGHIEIHPLLVRII
DTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQPELDITQRDI
LCVEIAGLCHDLGHGPFSHMFDGRFIPLVRPDLKWKHETGSVEMFEHLITSNKLEKVMES
YGLVLEEDMNFIKEQIGGPIDETTCEKSWPYLGRRKEKSFLYEIVANKKNGIDVDKWDYF
ARDCHHLGIQNNFDYKRLLKFTRVCEVKNQKHVCTRDKEVGNLYDMFHTRNCLHRRAYQH
KVGNIIEIMITEAFQKADQFFKIEGSKGTPYRISTAMEDMEAYTKLTDNIYLEILHSSCP
ELAEAREILQKIERRELYKFLGETQPEKVKEIAKDEYDGLSEEIANSKPEKNPPSVEPKA
EDFIVDVISMDYGMKEQNPIDNVLFYCKADPTKAVKISKEQVSKLLPETFAEQVIRVYCK
NQDPDTVSAAKQYFIQWCIRRDFTKPQDGDVVAPHLTPMKKSWNNTQEDECRTASESSCK
QRLPFDK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgacctgccggcctgcgccctcgagatcacccgcgtctgcctcccggctgag
agattgaaagtgctcgcctgcctgaacaaactgcgacagcagcacgtggacatcatgaag
gtttttaatgatccgattcatgggcacattgaaatacatcctcttcttgttcgcatcatt
gacactcctcagtttcagcgcctccgatacattaagcagctgggtggcacttactttgta
tttccaggagcctctcacaaccgctttgaacactctttaggggtaggctacctagcagga
tgtctggttcgtgccctgaaggaaagacaaccagaactggatataacccaacgagacatc
ctctgcgttgagattgctgggctttgtcatgatttggggcatgggccattttcacacatg
ttcgatggaagatttattccacttgttcgtccagatttgaagtggaagcatgaaactggt
tctgttgaaatgtttgaacacctgatcacttccaataaactagaaaaagtcatggaatct
tatggtcttgtcctggaggaagatatgaactttattaaggaacaaataggagggcctata
gatgaaaccacttgtgaaaaatcgtggccctaccttggtcgacgaaaggagaaaagtttc
ctttatgaaatagtagctaacaaaaaaaatggcattgatgttgacaaatgggattatttt
gcaagggattgccatcacctaggaatccagaataattttgattataaacgattacttaaa
ttcactcgggtctgtgaagtaaaaaatcagaagcatgtctgtacccgtgacaaggaagtt
ggaaatttgtatgatatgttccacacacgaaattgcctgcaccggcgagcataccagcat
aaagttggcaacatcattgaaataatgattacagaagcctttcaaaaagcagaccagttt
tttaaaatagaaggctctaaaggaacaccctacagaatttctacagccatggaggatatg
gaagcctacactaagctaactgataatatctacttggagattctgcactcaagttgtcca
gaactggctgaggcgcgagaaattttgcagaaaatagagcggcgtgaattatacaagttt
ttaggagagactcagcctgaaaaagtgaaggaaattgcaaaggatgaatacgatggcctg
tcagaagaaattgctaattccaagcctgaaaagaaccctccatctgtagagccaaaggct
gaagatttcatagttgatgttatcagtatggattatggaatgaaagaacagaaccccatt
gataatgttctcttctattgcaaagctgatcctaccaaggcagtgaagatcagtaaagaa
caggtctcgaagcttttacctgagacttttgcggagcaggttattcgggtttattgcaaa
aatcaggatccagatactgtttcagctgcaaaacagtattttattcagtggtgtataagg
agggatttcaccaaaccacaggatggtgatgtggttgcccctcatctaactccaatgaaa
aaaagctggaataatacgcaagaggatgaatgcagaacagcttcagaatccagctgcaag
caaaggcttccttttgataagtaa
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