Apteryx rowi (Okarito brown kiwi): 112968640
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Entry
112968640 CDS
T07573
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112968640 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arow03041
]
112968640 (DHX15)
03009 Ribosome biogenesis [BR:
arow03009
]
112968640 (DHX15)
Enzymes [BR:
arow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112968640 (DHX15)
Spliceosome [BR:
arow03041
]
Complex A
U2 snRNP components
U2 related factors
112968640 (DHX15)
Complex B
112968640 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112968640 (DHX15)
Ribosome biogenesis [BR:
arow03009
]
Eukaryotic type
90S particles
Helicases
112968640 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
112968640
NCBI-ProteinID:
XP_025926872
Ensembl:
ENSARWG00000009655
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYTSSKKRAADGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDFR
PTSNSTYFAAAGLQPIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctagacctgggggacgactacacctccagcaagaaacgcgcc
gccgacgggaaggatcgggaccgggacagggaccgtgatgaccgttctaaagatcgtgac
agggatcgggacagagacagagatcgtgacagagaaagggacaaggaaaaagattttcga
cctacatcaaattctacatattttgctgctgctgggttacagcctataaagccagcaatg
attccacacagtattaaccctttcacaaatctaccacatacacctcgatattatgacata
ctgaagaaacgactacaactccctgtctgggaatataaagaaagatttacagatattttg
attaggcatcagtcatttgtactggttggagagactgggtctggtaaaacaacacagatc
cctcagtggtgtgttgattacatgcgctctttacctggaccgaagaggggagtagcatgt
acccagcctaggagagtagctgcaatgagtgtggcacagcgagttgctgatgaaatggat
gtaatgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgcaaaa
actattttgaagtatatgactgatggtatgttacttcgtgaggcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctactgat
attttgatgggagttttgaaagaggttgtaagacagagagctgacttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctctccta
actatcccgggacgtacccatcctgtggagatattctatactccagaaccggaaagggac
taccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgatttgggtcctgaagttggtgacatcaaaatcattccattgtattct
acccttcctccacagcaacagcaaaggatttttgaacctcccccaccaaaaaagcaaaat
ggggcaataggaagaaaggttgttgtgtccaccaacattgctgagacatcattaacaata
gatggtgttgtgtttgtgattgatcctggctttgcgaaacaaaaggtatataatcctcgt
atcagggtggagtctctcttggtgactgcaattagtaaagcttctgctcagcagcgagct
ggccgtgctggtcgtactagaccaggcaagtgcttcaggctttatacagagaaggcttac
aagactgaaatgcaggacaacacatacccagaaattctgagatctaacctgggatctgta
gtgttgcagctcaagaagcttggtatagatgatttggtacactttgattttatggaccca
ccagctcctgaaactttgatgagagccttagagcttttgaattatctagctgctttaaac
gatgatggagacttgactgagttgggatccatgatggctgaatttccactggacccacaa
ctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgagatttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagactttaccagccgagactattacatcaatataaga
aaggcattagttactgggtatttcatgcaggtggcgcatttggaacgaacagggcattac
ttaacagtaaaggacaaccaagtggtgcagttgcatccttctactgttcttgatcataaa
ccagaatgggtgctttataatgagtttgtccttacaacaaagaactacattcggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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integrated database retrieval system
