Apteryx rowi (Okarito brown kiwi): 112968733
Help
Entry
112968733 CDS
T07573
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
112968733 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arow04054
]
112968733 (DHX58)
Enzymes [BR:
arow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112968733 (DHX58)
Pattern recognition receptors [BR:
arow04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
112968733 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
TTRAP
AAA_22
SRP_TPR_like
Tantalus
Motif
Other DBs
NCBI-GeneID:
112968733
NCBI-ProteinID:
XP_025927029
Ensembl:
ENSARWG00000014641
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MELRDYQWEVITPALGGENSIIWLPTGAGKTRAAVYVCKRHLETRQRGKVAVLVNKVHLV
DQHAKKEFHVLQDAFRITAISGDNEQKFFFAWVVKQNDIVICTAQILQNALVSKEEDMHV
ELTDLLPRPGTDFSLLVIDECHHTQKDAIYNKIMLNYLQHKLRGRQNLPQILGLTASPGT
GGATSFEGAVEHILQICANLDTAKIMSAQEHLHHLQTQVPQPRKQYNLCQERAQDPFGEQ
LKKIMDQIQQYMGSPGLPQDFGTQIYEQRIVELEKNAAETFCRKRRVCALHLRKYNDALL
INDTVRMIDAFQCLREFYLLERDMKDPTERFLATTFEENRMCLLELARNQQYENPRLSKL
EEILQEQFQSLGTSRGIVFTRTRQSAHSLRSWLKDTASLRGLDIRAAVLTGAGYSNQTKH
MTQNEQQDVIELFRKGDLNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMMQARGRARA
ENSVYSILAKASSREVSRELLNEDLIELMVRAIRKVQDMPEREYRLKITELQRNAVVSWK
LKEAKNSERRQLHDPGTACLYCVNCNMAVCHGSDIRTVEGMHHVNINPLFRLYYRVTPGK
VELERSFKDWEPGCRIVCNECSQDWGMEMIYQGVKLPILCIKNFVVETPAEKRKYKKWSS
VTFSVKEFDYLEYCSSIEDQPF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgggactaccagtgggaagtgatcaccccagccctgggcggcgagaacagc
atcatctggctgcccacgggcgccgggaagacccgtgccgccgtctacgtctgcaagagg
cacctggagaccaggcagcggggcaaggtggccgtgctggtcaacaaggtgcacctggtg
gaccagcatgccaagaaggagttccacgtgctccaggacgccttcaggatcacagccatc
agcggggacaacgagcagaaattcttctttgcctgggtggtgaagcagaatgacattgtg
atctgcactgcccagatcctgcagaacgcactggtcagcaaagaggaggacatgcatgtg
gagctgacggatctcctccctcgccctggcacagatttttccctgctggtgatagacgag
tgccaccacacgcaaaaggatgccatctacaacaaaatcatgctgaactacctccagcac
aaactgagagggcggcagaacctgccgcagatcttgggtctgacggcatcacccggcact
gggggtgcaacgtccttcgaaggagctgtggagcacatcctgcagatctgtgccaacctg
gatactgctaaaatcatgtcggcccaggagcacctccatcacctgcagacccaagtccct
cagcccaggaagcagtataacttgtgtcaggagagagcgcaggacccctttggagagcag
ctgaagaaaatcatggaccagatccagcagtacatgggctcacctggcctgccgcaggac
tttggcacgcagatttatgagcagcgcatcgtggagctggagaagaacgcagcagagacg
ttttgtcgcaagaggcgtgtgtgtgcgctgcacctgcggaagtataatgacgccttgctg
atcaacgacacggtgcgcatgatcgacgccttccagtgcctcagggagttctacctcttg
gaaagggacatgaaagatccaacagagcgcttcctcgctaccacgtttgaggagaacagg
atgtgcttgctggagctcgccaggaaccagcagtacgagaacccccggctgagcaagctg
gaggagatcctgcaggagcagttccagtctctgggcacttctcgtggcatcgttttcacc
aggacccgccagagtgcccacagcctgcgcagctggctgaaggacacagcgtcgctccgt
gggctggacatcagggctgctgttctcaccggggctggttacagcaaccagaccaagcac
atgacgcagaacgagcagcaggatgtgatcgagttgttccgcaagggagacctcaacctg
ctcttctcaaccagcgtggctgaggagggcctggatatcccggagtgcaacatcgtggtt
cgctacgggctgatgaccaacgagattgccatgatgcaggccagaggccgtgcccgtgcc
gagaacagcgtgtactccatcctcgccaaagcaagcagcagggaggtctcccgggagctg
ctcaacgaggatctcatagagctcatggtcagggcgatcagaaaggtgcaagacatgccc
gagagggagtaccgcctcaagatcacggagctgcagcgaaatgccgttgtcagctggaaa
ctgaaggaagccaagaacagcgagaggcggcagttgcatgacccaggcaccgcttgcctc
tactgtgtcaactgcaacatggcggtgtgccacggcagtgacattcgcaccgtggagggc
atgcaccacgtcaacatcaaccccctcttcaggctttattacagagtcacacctgggaaa
gtggagttggagcggtctttcaaggactgggagcccggatgccgcatcgtgtgcaatgag
tgcagtcaggactggggaatggagatgatctaccagggggtgaagttgcccatcctctgc
atcaaaaacttcgtggtggagacaccagctgaaaagaggaagtacaagaagtggagcagc
gtgacgttctccgttaaggagtttgactacctggagtactgctccagcatcgaagaccag
cccttctag
DBGET
integrated database retrieval system
