Apteryx rowi (Okarito brown kiwi): 112968739
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Entry
112968739 CDS
T07573
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112968739 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arow03041
]
112968739 (DHX8)
Enzymes [BR:
arow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112968739 (DHX8)
Spliceosome [BR:
arow03041
]
Complex C
Other components
Step II factors
112968739 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
PRP38_assoc
Flavi_DEAD
T2SSE
AAA_16
PhoH
TsaE
ABC_tran
Sigma54_activ_2
Transformer
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112968739
NCBI-ProteinID:
XP_025927047
Ensembl:
ENSARWG00000014201
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MADPVALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDTFKAVLLK
NGAEFTDSLVSNLLRLIQTMRPPSKPSTSKEAVVKPKSEKEKLKELFPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRNSDHRAKKKRKSRSRSRDRKRRHRSRSRS
RSKTRDKNRGKSRYRSRSRSQSPSRDRKDREKYVEKSNDRWRDKHVDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccggtggctctggaggagctcgctaagctcgagtacttgtcgctagtctcc
aaggtgtgcaccgagctggacaaccaccttggcatcaacgacaaggacctcgccgagttt
gtgataaatcttgctgagaaaaacactacgtttgacacatttaaagctgttcttctaaag
aatggtgctgagttcactgattcccttgttagtaatttgctgcgtctcatacagacaatg
cggcctccatcaaaaccatctacaagcaaagaggcagttgtcaaacccaaatcggagaaa
gaaaagttgaaggaattgtttccagccctttgcaggccagacaatcccaacatcaggaat
atgttggatgaagatgatgtgaaagtggcagctgatgcactaaaagagcttgaagctcta
atgcctagtgctgacagacaaggcaagcaaaggaacagcgaccaccgggcaaagaaaaag
aggaagagccgaagccgcagcagggacaggaagcgaaggcacaggtctcgttctaggtct
cgttctaagactcgggacaagaacaggggaaaatccagataccgctcaaggagcaggagt
cagagtcccagcagggatcgtaaggatcgagagaaatatgtcgagaagagcaatgataga
tggagagacaagcatgtagaccgtccaccacctgaagagccttccattggtgacatttac
aatggcaaagtgacaagtataatgcaatttggatgctttgtgcagctggaaggactaagg
aagcgctgggagggcttggtccacatctctgagcttcgaagagaaggacgggttgccaat
gttgctgatgttgtgagcaaaggtcaaagagtaaaggtcaaagtgttatcttttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaaccca
aaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgaggaacccagac
agacccagtcacctttccctggtaaatgctccagaggtggaggatgatacccttgaaagg
aaacgcctcacccgaatttcagacccggagaaatgggaaataaaacagatgattgcagct
aatgtgctttccaaagaagagtttcctgactttgatgaggagactgggattcttcctaaa
gttgatgatgaagaagatgaggaccttgagattgagttggttgaagaagagccaccattc
cttcgaggtcatactaaacaaagcatggatatgagtcccatcaaaatagtaaagaatcca
gatggttccttgtcccaggctgcaatgatgcagagtgcgttagctaaagaaaggcgggaa
cttaaacaagcccaaagagaagcagagatggattctatccctatgggactcaacacacac
tgggtggatcctcttcctgatgtggatggaagacaaatagctgcaaacatgcgaggtatt
gggatgatgccaaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagct
tcttatggtaaaaaaacccaactttccatcattgagcagagggaaagtcttccaatcttc
agactgaaggagcagctgatacaagcagtgcatgacaaccagattctgattgttattgga
gagacaggatctggaaaaacaacacagattacccagtacttggctgaggcggggtataca
tcgagaggaaagattggatgcactcagcctcgcagagtggctgcaatgtctgttgcaaaa
cgagtgtcagaagaattcggctgctgtttgggacaagaggttggctacaccattcggttt
gaagactgcactagccctgaaaccgtcatcaaatacatgacagatggtatgttactgagg
gagtgcctgatagatcctgatctgacccaatatgccattatcatgctggatgaagcccat
gagaggaccattcatacagatgttctctttggactcctgaagaagacggtgcagaaacgg
caggatatgaagttgatagtgacatcagcaacactggatgctgtgaaattctctcagtat
ttctatgaagctccaatcttcacaattcctggcagaacatacccagtagaaattctgtac
acaaaagagccagagacggattatttggatgccagtctgattacagtaatgcagatccac
ttaacagagccaccaggtgacattttggtgtttctaactggtcaggaagagattgacact
gcctgtgagatcctctatgagaggatgaaatctctaggacctgatgttccagagttaatt
atcctgccagtatattcagctttaccgagtgaaatgcaaaccaggatctttgacccagcc
ccaccaggaagcagaaaggttgttattgccactaacattgctgagacctctctgactatt
gatggaatatattatgtagttgatcctggctttgtgaagcagaaagtttataactccaag
actggaattgaccagctggttgttacaccaatttcacaggcccaagcaaagcagcgagca
ggaagagctgggagaacaggaccaggaaaatgctacaggctatatacagagcgtgcttat
cgagatgaaatgctaaccaccaatgtacctgaaatccagagaacaaatctggctagtaca
gtgctctccctgaaggctatggggatcaatgatttgctttcctttgactttatggatgct
cccccaatggaaactctcataactgccatggagcagctctataccttgggagctctggat
gatgaaggactgctcactcgacttgggcgcaggatggcagaattccccttggagcccatg
ttgtgtaagatgctgatcatgtctgtacatctgggatgcagtgaggaaatgttgacaata
gtctctatgctgtctgtacagaatgtattctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagccaagttccatcaaacagaaggtgaccacctcactctgctggctgtg
tacaattcctggaagaataataagttttcaaatccctggtgttatgaaaattttatccag
gctcggtccttacgcagggcacaggacatccgcaagcaaatgttgggcattatggacaga
cacaagctggatgtggtgtcctgtgggaaggcaacagtgcgagtccagaaggccatctgt
agtggcttcttccgaaatgcagcaaagaaggatccccaggagggttatcggacactcatt
gatcaacaagtagtctatatccacccatccagtgctcttttcaacaggcagccagaatgg
gtggtgtatcatgaactggtgctgaccaccaaggaatatatgcgtgaagtgaccactatc
gatccccgctggctggtggagtttgcaccagctttcttcaaggtttctgacccaaccaag
ctgagcaaacaaaagaagcagcagcggctggaacccctgtacaatcgctatgaggagccc
aacgcttggaggatctcgcgtgcattcagacgccgatga
DBGET
integrated database retrieval system
