Apteryx rowi (Okarito brown kiwi): 112968862
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Entry
112968862 CDS
T07573
Symbol
ZBED1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112968862 (ZBED1)
04121 Ubiquitin system [BR:
arow04121
]
112968862 (ZBED1)
Transcription factors [BR:
arow03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
112968862 (ZBED1)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112968862 (ZBED1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
ZBED1_RNase-like_helical
ZBED1_RNase-like
hAT-like_RNase-H
PRRSV-NSP11_N
RE_MjaI
Motif
Other DBs
NCBI-GeneID:
112968862
NCBI-ProteinID:
XP_025927318
Ensembl:
ENSARWG00000016560
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDNLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYNAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSPSNCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYGKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCSLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLEASEWNTVEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENTFRTEEKFFAVSEEPPVKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENTRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNVNNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcatccgaga
gcaaagagtaaagtatggaagtactttgggtttgataccaatgcagaaggatgcatatta
cagtggaagaaaatctactgccgtatttgcatggcacaaattgcctattcaggaaacact
tccaacctttcataccaccttgagaaaaatcaccctgatgaattctgcgagtttgtgaaa
agtaacactgagcagatgagggaagcctttgctactgccttttcaaaaatcaagccagaa
tcatcacagcaggttgttcaagataatctaattatgaagacctaccagaattatgaaaac
aaaaagcatcaagaactgacatctgcggtcatcagcttaatttgtgagggcatgtatcct
gcctctattgttgatgaacccacgttcaaggccctcttgagaacagctgatcccaggtat
gaactccctagccggaagtatttctgtacaaaagctattcctgaaaaatacaatgctatt
agagaaattgtattaaaggagctcactgaagttctgtggtgtggcatatccacagacatg
tggaggagtgaaaaccagaacaggtcatatgtaacagttgcagttcattttctcagcagt
agtccttctaactgcctggctgttaactcacggtgtttaaaaacatttgaagtaccagag
gataatactgcagagactattacacgagtcctttatgaaaccttcattgaatgggggatc
aatacaaaagtctttggtgctacaacagattatggtaaagacattgtgaaagcttgctct
ctgctagatattccagtacagatgccttgtttggggcacacttttaatgcaggaatacaa
caagcttttcagctccccaaactgtgcagccttcttgccaggtgccgaaaactggtggaa
tattttcagcagtctacagtagcaatgtatatgctgagcgagaagcagaagcagcaaaat
attctgcactgtatgctcgtaagcgatcgtgtttcctggtggggaagcacgcttgctatg
ttgcagcgtcttaaggagcagcagtttgtcattgcagcagttcttgtggaggacagcaat
aaccaccacctcatgctggaagccagtgagtggaatacagtcgaaggcctggtggagctg
ttgcaacctttcaagcaggttgcagagatgatgtccgcctccaagtacccaacgataagt
atggtgaagccgcttctccacatgcttctcaacactaccctgaacatcaaagagaatgat
ttgaaagagatcagcatggcaaaggaagtaatagcgaaagagctgtccaccacctaccag
cacacccctgaaatagacatgtttctcaacgttgcaactttcctggatcctcgatacaaa
aaactaccttttctttcggcgtttgagcgacagcaggttgaaaacagagtggtggaagaa
gcaaaaagccttctggagaaagtaaaagaaaacacctttaggactgaagaaaagttcttt
gcagtttcagaagagccccctgtgaaaaaaataataatctcctcaactcctcctcctact
agtgtaatcaacaacatgcttgcagagatcttttgccagacaggaggtgtagaagaccag
gaggaatggcatgctcagattgttgaggaattgagcaactttaagtcacaaaaggtcctt
ggtttgaatgaagatcccctaaagtggtggtctgatagattagcactctttccggtttta
ccaaaggttcttcagaaatactggtgtattctggccacaagggtctttcccgaacgcctt
tttggttcttctgctaatgttgtaagtgctaagagaaaccggttagccccagctcacgtg
gatgagcagatctttttgtatgaaaacactcggaatgggtctgaggcagagccagaagat
gaagatgaaggggagtggggtttggaacaggaacagatttttaatttgaatgactcggta
aatgtaaacaacaatttctttaacatccgtgacagtgggtttgtttaa
DBGET
integrated database retrieval system
