Apteryx rowi (Okarito brown kiwi): 112969258
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Entry
112969258 CDS
T07573
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arow03036
]
112969258 (TRERF1)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
112969258 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Myb_DNA-bind_6
zf-C2H2_2
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
112969258
NCBI-ProteinID:
XP_025928168
Ensembl:
ENSARWG00000003937
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MGDQQLYKTNHTANNNENLYYQQHQMNSLPSLNHSYGTSVMDAPQASPLSPQFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSVSGNHVPVRNNLNNQNAMWSPLGQGESHDGYQYSYS
QSGENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNSGDSALRQLL
SQKPAVEQQPVTSSVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQPHVQQMQSQQLLPQQMQHLQQTQYYAQPQQGHQRLSIQEIQQQQQQPTRQQQQ
RQCPMQIAQYYQTQPVMQQLQQQQQQMQLQLPPYHREPDPKTMHEPHQYPQDPSHPVQLI
QLGAVPQYCYQDPHEQYRHLYPQSLLQQQEDQQKQYPNESRGQSLNSHVGLTPPETAEDP
TRQEVNSVGNTVPHRTLLPMSGVRLNNKNSQQDSPSTMWPQQMQLSDGRLQPLSPEQSGQ
SRETFPERADAKNKLTCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLP
KEVDSLAPIVMPVSVPVKLLSPEPSTQPSANTATVKDKPANPVSDDEMPVLVKMTCSPPC
SPKVANPCSSAEISKKPHQSAAKLEENFKPLQDKKKYRHRPEPLFIPPPSFNFSMSHSGA
TLYQSQLRSPRILGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHTQLPL
TPLTPTPRILLCRSNSIDGSVVPVTPGPGEQTVEPRINIGSRFQADIPELRDRLLMEKDV
HKATLVWKPWPELENKIFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALE
KLLLRKPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQC
VEYYYTWKKILRLGRKHRTRLEKKREECLYLFQTSGEEEVLEEDEEIEEDRKEEREMQKS
PDPPAIPLVGPIDLPALQSLTLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKT
RCTIPGTKQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKT
HRQQEEQQRQKAQKAAVAAEMAATIARTTGPVGHGVIPLDHMNLVKQVENVGDIEDDVVQ
ELGDVMEENEVMDADLLLDDEDADLLQDDAEL
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaaccaaccatactgccaacaacaatgagaacttgtac
taccaacagcaccaaatgaactcccttccatctctaaatcatagttatgggacgtctgtt
atggatgctcctcaagcatccccgctctctccccagtttccccaagattcaagagacagt
atagctttgcctgtaggttcaaaaagtcttgggtcaatggatacatctagacaaacaagt
tggacacattctgtctcaggaaaccatgtcccagtaagaaacaatttgaataatcaaaat
gcaatgtggagccccctcgggcagggagaatctcatgatggataccaatattcttattct
caatctggtgaaaatcgatcacaaaaaattaccagtggggtcctgcataaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaatatggctcaggtt
ttgcacactgagtcttcaatggtggataattctggtgatagtgcacttaggcagctgctg
tctcagaagccagcagttgagcaacagcctgtaacttccagtgtacaaagatatcaacca
gtgccacagcaaacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtattatgactaccagcagcatttatcacaaatgcagatgcat
tctgcgtttcagcaaggacagccacatgttcaacaaatgcagtctcagcagctcttaccg
caacagatgcagcacttgcagcagactcaatactatgctcagccgcagcagggacatcag
cgactttcaatacaagagatccaacagcagcagcaacagccaactcggcagcagcaacag
aggcagtgtccaatgcaaatagctcagtattatcaaacgcaacctgtcatgcaacagtta
cagcagcagcaacaacagatgcaattgcagcttcctccatatcacagggaacccgatcca
aagactatgcatgaaccacaccagtaccctcaggatccaagtcatcctgtgcagcttatc
cagttgggagcagtgcctcagtattgctaccaagatccccatgaacagtatagacatttg
tacccacagagtttactgcagcagcaagaggatcagcaaaagcaatatccgaatgagagc
cgaggtcagtctctgaactctcatgttggcctcactccaccagagacagcagaggatccc
acacggcaggaggttaattctgtaggtaacactgttcctcatcgaactcttctaccgatg
tcaggagttcgtctgaacaacaaaaactctcagcaagactctcccagcaccatgtggcct
cagcagatgcaactgtcagatggcagactgcagccactgtccccagaacaaagtggccag
agcagagaaacatttcctgagagagctgatgcgaagaacaagctaacatgttcaatatgc
ttgaaggagtttaagagtttgcctgctctaaatggtcacatgagatcacatggaggagta
agagcatctcctaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgcct
aaagaggtggatagcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctg
tcacccgagcccagcacgcagccctctgccaacactgccacagtcaaagacaagcctgcc
aaccctgtgtcagatgatgagatgccagttctcgtgaagatgacttgctctccaccgtgc
agtccaaaagtggccaacccctgctcgtccgctgaaattagcaaaaaacctcatcaaagt
gctgcaaaattagaagaaaacttcaaaccactgcaggacaagaagaagtatcggcataga
cccgaacctctcttcatacctcctccttccttcaacttcagtatgtcccactccggtgcc
acactgtaccagagtcagctccgctccccccgcatcctcggagatcatctgctagaccgg
acgcacgagctccccccttacactccgccacccatgcttagtccagttcggcaaggatct
ggtctcttcagcagtgttatcacatcatctcatagcacctctcatactcagctgccactt
actccactgacacctactccacggatactcctgtgtcggtctaatagtattgatggaagt
gtcgttccagtgacgcctgggcctggagaacagactgtggaaccacgaatcaatattggg
tccaggttccaggctgacattcctgagcttcgggacaggttgctaatggagaaggatgtg
cacaaggctactttggtttggaaaccatggccagaactggagaataaaatcttccaacaa
agagtggaagacctcttaaatatgagttgttccagtgtgttacctggtggaggaactaac
tcagaatatgctttgcactctctctttgaggcgaaaggagatattatggttgctcttgag
aagctgctgttgaggaagccagtgagattgaagtgtcatcctttggcaaattaccactat
gctggctctgacaaatggacacatcaagaaagaaggttgttcaaagaggcattgtccacc
tacagcaaagattttatatttgtacaaaagatggttaagtctaagacagttgcacaatgt
gtggaatactactatacttggaagaaaatcttgcgtttgggacggaaacacagaacacgt
ctagagaaaaaaagagaggaatgcctgtatctgtttcagacaagtggagaagaggaagtt
ctagaggaagatgaggagattgaagaagacagaaaggaagaaagagaaatgcagaaatct
cctgacccacctgctatccctcttgttggacctatagatctgcctgcccttcagagtctc
acactttcttcgtcctcctttatctgtgaaatgccaaactgtggtgctgtgttcagttcc
cggcaagcgctaaatggccacgctcgcattcatggaggtacgaatcaggtgacaaaaaca
cgatgcaccattccaggcactaagcagaaatctggtacgcagagcggatactgctccatc
aaaagttcacctgcccacagcacaacaagtggtgagaccgacccaacaacaatttttcct
tgtaaagagtgtggcaaggtatttttcaaaatcaaaagccgcaatgctcatatgaagact
cacagacaacaagaagaacagcaaaggcagaaggctcagaaagctgctgtggcagcagaa
atggcagccactattgcaagaactactgggccagttgggcatggtgtgatccctctggat
catatgaatttggttaaacaggttgaaaatgtaggtgacattgaagatgacgttgttcag
gagttaggtgatgtcatggaagagaatgaagtcatggatgctgaccttttattagatgat
gaagatgcagatctactgcaggatgatgctgagctgtaa
DBGET
integrated database retrieval system
