KEGG   Apteryx rowi (Okarito brown kiwi): 112969621
Entry
112969621         CDS       T07573                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:arow00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:arow01009]
    112969621 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arow04121]
    112969621 (TRIM42)
Protein phosphatases and associated proteins [BR:arow01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112969621 (TRIM42)
Ubiquitin system [BR:arow04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    112969621 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box AbiGii_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Ig_J_second
Other DBs
NCBI-GeneID: 112969621
NCBI-ProteinID: XP_025928865
Ensembl: ENSARWG00000005720
LinkDB
Position
Unknown
AA seq 732 aa
MAKSERPCLIWPCCSNCCYLTCHSRSEGCCLCWRFLFTNERNCSCFPCPYAEDKPCQCCH
CSCAEHANCWWCCCSCSNNPDCKCDCCSGENSACQYYESRCCRSSVYKPHHSRALGTVQS
KDVLSRFRTRSDASVVTLERNVSGHAFRDQLTCPLCKQLFLQPFMLPCNHCICEKCITKS
KSKAEVTENFFIIICPVCSKAHCLPYTNKIQLRKNYLRAKLAKKYMRRHGFLRWRFDYSE
RPVYCQTCRERKRKATKKCRTCGINYCNECLHIYHIETGAQDHIFTRAYQEDHEQWRCLL
HYSSNLSEYCVDDHELICEFCKNSLHNDHDTIPLTVACSREAASLFDTIAKFKKVRHGVD
NDLMEVLLLKNNFKAYKDTKRKEIRNGFLKLRMVLHEREKEMMELLENIELKKQKDISEY
INYTSSQLSYMDGLIQYSKEALKEESQVVFLQSAHCLVKEIEDAIASIFQPSPCLREDPL
KKLQLNFDELLINLRGLFPSPSRIKQSDGKAEKYPYPCNSDIMVPRHIPSTQEFKPASLF
RSPSLNSLFDLGLMTKEALGRPSSTPPHHPKPRNEMCAYWDAACETPKKERKYQNVSFPS
PEPTDNESVTVPGFVVIYQTVVYPRSAKIYWTCPTEDVDFFEVEFYEVVAIGPDNIVQTQ
LAGQLSKIKQQNLEIQHLDPNTEYLFKVRAVNTSGPGEWSDICKIITPDEHGKVQGRWGI
RRSIQSALHTDT
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggccaaaagtgaacgtccctgtttaatctggccatgctgctcaaactgctgttaccta
acttgccacagcagaagtgaaggatgctgtttgtgttggcgtttcttatttaccaatgag
cggaactgcagctgtttcccgtgtccatatgcagaagacaaaccttgccagtgttgccac
tgctcatgtgcagagcatgcaaattgctggtggtgctgctgctcttgttcaaataaccca
gactgcaaatgcgactgctgtagtggggagaattcagcgtgtcagtactacgaaagcaga
tgctgcagaagctctgtctacaaaccacaccactcaagagcactagggactgttcagtca
aaagatgttttgtcaagattcagaactagaagcgatgcatctgtcgttacactggaaagg
aacgtctcaggccatgctttccgcgaccagctcacctgtccrctgtgtaaacaattgttt
ctccaaccatttatgctgccatgcaaccactgtatttgtgagaagtgtataactaaaagc
aagagcaaagctgaagtgactgaaaattttttcatcatcatatgcccagtgtgtagcaaa
gcacattgcctcccctatactaataaaattcagctgaggaagaattacctgagagccaaa
ctagccaagaaatacatgcgcagacatggctttctgaggtggagatttgactatagtgaa
agaccagtctattgtcaaacttgcagggagagaaaaagaaaggcaaccaaaaaatgtaga
acatgtggaattaattactgtaatgaatgcctgcacatatatcatattgagactggtgct
caagatcacattttcaccagagcatatcaagaagatcatgaacagtggcgctgcttattg
cactacagctcaaacctctctgaatactgtgtggatgaccatgagctgatctgtgagttt
tgcaagaactcactgcacaatgatcacgacactattcccctgacagtggcgtgttcaaga
gaggccgcttccctcttcgatactattgcaaagtttaaaaaagtacgccacggtgttgat
aatgatctaatggaagttctcctgctaaaaaataacttcaaggcctacaaggacaccaaa
aggaaggagatcagaaatggattcttaaaattacgtatggttcttcatgaacgagaaaag
gagatgatggagttgcttgagaacattgaacttaaaaaacagaaggacatttcagaatac
ataaactatacatccagccagctctcatatatggatggccttattcagtactctaaagag
gctctaaaggaggaaagccaggttgtatttctgcaatctgcacactgcttggtgaaagaa
atagaagatgcaattgcttccattttccaacccagtccatgtctcagagaagatccctta
aaaaaacttcagctcaactttgatgaacttttgatcaatttacggggacttttcccatcc
cctagtagaataaagcagtcagatggtaaagcagaaaagtatccctatccttgtaactca
gatataatggtcccaaggcatattccaagcactcaggaattcaagccagcatcattgttc
cgaagcccatctttaaattccttgtttgatttaggactgatgactaaagaagctcttgga
agaccaagctctacacctccccatcatcctaagccacgtaatgaaatgtgtgcatactgg
gatgcagcttgtgaaactccaaaaaaagaaagaaaatatcagaatgtttcctttccaagt
ccagaaccaacagacaatgaatcagtcacagtcccaggatttgttgttatctaccagact
gttgtatacccaaggtctgccaaaatttactggacctgtcccacagaagatgtggatttc
tttgaggtagagttttatgaagttgttgctattggtcctgataacattgtccagacacaa
ctagctggccagctgagcaaaataaagcaacagaaccttgaaattcaacatctggaccca
aatacagaatatctttttaaagtccgtgctgtcaatacaagcggtccaggtgaatggagt
gacatctgtaagataatcactccagatgaacacgggaaagtccagggcaggtgggggatt
cggaggagtattcagagtgctctgcatacagatacatag

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