Apteryx rowi (Okarito brown kiwi): 112969833
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Entry
112969833 CDS
T07573
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112969833 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
arow04091
]
112969833 (FREM1)
Lectins [BR:
arow04091
]
C-Type lectins
Lecticans
112969833 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
112969833
NCBI-ProteinID:
XP_025929328
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MKPFENSWLFLLLAVILRVVCASFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDACKVE
VVINEPITQRVGKLTPQVFDCHFLPHEVKYTHNGCPLLDEDSVMLRLYRFTENKTFAETF
ILHVQLLEPDCNIIKMRTHALEVPEYYGLSRVINKNVLTFDYDRKINLDCTITIXSSEMH
LPAHGQLIVGEGQREQPRGDEPQTFFPGSKHSLGQPCRSGNCMPGQGAIHNTKMSCEEFL
RMGIRYQHLDPPSPDTDYIPVRLDLTDIRSKTLHKTEYAWLPVQIKGAIPNQIPKAALSA
KFSLEVDQFILTPITTTTVDAEDNETLKPLLVFNITKPPPQGFITHLSDHTKPIGSFTWK
DVSDMLVAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWEHFQIVDNDDIQNVRLVTVDGLQHGRLTVRGGKGFMFTVSDIQAGAV
YYHHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNVIIEVHEGQTILIQ
GSMLQASDMDSSDDYILFNITKPPHAGEIMKKPGPNLIGYPVSTFLQRDLFNGIIYYHHL
GGEIFEDSLEFVLCDSHDPPNLSEPQVLMVHIIPVDDQLPREVPGVTRHLVVKETEIAHL
TKKHLHFIDVEEQERELTYTITSSPFFFCRHSHLDAGKLFMVDTIPKLVKDPAALALRSF
TQHAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVF
SSHLRVEEGGLSPITEGHIHLSDVDTRREHLLLFLRRQPQHGAVELDGVPMKEGDRFSCG
DLFTLAVRYQHDGSETLTDDILFAATDSIHSVEFILQVKVLPVNDEPPVMRTGLIPVVHC
LEGEEVVLSSEYICATDADSDDMKLMFTLVRQPYHGVVRQAGIVVDRFSQADIISGLVTY
KHTSGEIGLTPSFEILTFVVSDGKAGSDANDCCYDGLLPPPVPLHDPLPVFDLNITVLPV
DNQPPSIITGARFVVEEGSSAALTANHLFATDPDTAADDLEFVLVSPPQFGYIENILPSP
GFEKSNIGISIASFQLKHLKALNINYVQSRHIRIEPTSDKFVLYVTDGLHHSAETPFFVL
INPTNDEVPEFIARNISVQEGEMKELDLSVINAVDLDVPQDHLVFSVVQKPWHGFLINGV
HGNDILHYKQLITHHHSHELLVHEFSMELLMNGMKLIYMHDDSENLTDSFTIQLSDGKHK
VLRTISVKVFPVNDEKPVLSKKDDIEVNMGETRIISSAVLSAKDKDTPRERIYYLFERIP
ENGQLQLKVGRDWVTLQTGMKCTQEELDMNLVRYIHTGPIGSKNQDSFTFYLWDGYNRSP
AVDFYINIKDMERGAIAVFIKPLRVPKGDRGYITTDALLALDGTDKPEELLYVITSPPQY
GQIEYVSYPGIPITSFSQMDVAGQIVCYVHNTEAPVSEDTFRFFISNGLRTKHGTFTISL
EAVDQALPTLSRNMGLRLVEGAMALLSPDVLQLSDPDTAKENLTFLLAQVPQNGHLYYRG
AVLLQHNFTQQDVDNMDVAYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQIEPVAFTIQ
VDHMDKMAPKIIHLRCFTDVKLLKNGNYGIYITARSLKASDPNTENDKIIFKILRGPRYG
YLENITTGGFIHEGFSQKDLNSKIVLYVINPMREVNSDDLEFQVSDPNGNSAVPQILELS
WSRIEMQQIEYEVCENVGTVSLTITRAGHSADSAFVAVKINEISAVLGKDFTVTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVVLSSPVNAILGTRTKAVVKILDAKGGQCSSFH
SSGQNKHDFWGRGTLFPVSSGSSSPSRLGSIHLEGIPPSPSKGMTEHRGDALQEHSLANR
SRTRLRVIGNGRIVHPSSVFRNGTDVVFKYHGMVSLRIEEDSSSTKANNKAEVSVINQAQ
PQTDTIASRKTEIPQADKAELASEPSSNHQDFYSFPKACTPDLKGLLHYEESTQKLYQCN
GIIWKSWNSQSKEVSTRKCPAGWSHHEGSCYFLVVNHKVTWNTAAQACREQYLGSLASVA
NEQHMKWLWDFSGRKPFWIGLNDRVNAGHWEWNSGEPITYINWRRGLYRIPKRGKNCVLV
QKRGKWQATDCRKAKQNSYICSRKL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaacagctggttgtttctactgctggctgttatcctgagagtcgtc
tgcgcctcctttatcagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaagatgcctgcaaagtagaa
gttgtgattaatgagccaataactcagagggttgggaaactgactccacaggtgtttgac
tgtcacttccttcctcatgaagtcaaatatactcacaacggctgtccgcttttagatgag
gacagtgtcatgctcaggctgtacagatttacagaaaataaaacatttgcagaaacattc
atcctccatgtgcagttacttgaaccagactgtaatatcatcaaaatgcgcacccatgct
ctggaggtccctgagtactacggtctgtccagggtgatcaacaagaatgtcctcactttt
gactacgacaggaagataaacttggattgcaccatcaccatarcctcttcggaaatgcac
ctgcctgctcatggccagcttatcgttggggaagggcagcgagagcagcctcgtggagac
gagccacagaccttcttccctggttctaagcacagcctgggccagccgtgcagaagtggg
aactgcatgccaggacagggagcaattcacaacacaaaaatgagctgtgaagagtttctg
aggatggggatccgatatcagcaccttgaccctccctcgcctgacaccgactatattcct
gtcagacttgatctcacagacattagaagcaaaactttgcacaagactgagtatgcatgg
cttcctgttcagattaaaggtgctattcccaaccaaatccccaaagctgccctttcggca
aagttcagcctggaagtagaccaatttattttaactcccataacaaccacaactgttgat
gctgaagacaatgaaacactgaagcccctgctggtattcaacattaccaagccacctcca
cagggcttcatcactcatctatcagaccacacaaaaccgattggctccttcacatggaaa
gatgtcagtgacatgcttgtggcttatcagcctccaaataacagccacacagagaggagg
aattatgaggtggagtttgaggtacatgacttctattttgaaaggagtttaccaatcact
gtgcatctttctatcagaacaacagatacaaatgctcctcgggtttcatggaatacaggc
ctcaacctcctggaagggcaatcccgaccgatcacatgggaacacttccaaattgtagat
aatgacgacatccaaaatgttcgcttggtgacagtagatggcttgcagcatgggcggctc
acagtgagaggagggaaaggattcatgttcacagtctctgacattcaggctggagctgtt
tactaccaccacgatgacagtgactctaccaaggattttgtggtgtttaggatttttgat
ggcccccacagtattcgccataaatttccaatcaatatccttcctaaagacgacagccct
ccatttcttatcagcaatgtgataattgaagttcatgaaggacagacaatcctgatccag
ggctccatgcttcaagcctctgacatggactccagtgatgattacatactatttaatatt
accaagccaccgcatgctggagaaatcatgaagaaaccaggaccaaacctgatagggtat
cctgtcagtactttccttcagagggacctgtttaatggaataatttattatcatcattta
ggaggagaaatatttgaagattcccttgagtttgtcttgtgtgatagccatgaccctccc
aatctgtcagaaccacaggtgctgatggtgcacattatccctgtggatgatcagctaccc
cgggaagtcccaggagtgactcgtcacctggttgttaaggagactgagattgctcatcta
actaagaaacatctccacttcatagatgtggaagaacaagaaagggaactcacgtacacc
ataacctcttccccatttttcttttgtagacacagccacttagatgctgggaagctgttt
atggtggacaccatcccaaaactggtcaaggatcctgccgctcttgcgctgaggtcattt
actcagcatgctgtgaattatatgaaagttgcctacatgcccccactgcaggacattggg
cctgaacctcagcaagtccagtttatattttctgtcagcaatcagcatgggggcactttg
tatgggatctgcttcaatattacgattcttcctgtggacaaccaagccccagaggtgttc
tcaagccatctgagagtggaagagggtggcctgagccccatcacggaggggcacattcac
ctctctgatgtggacacaagacgggagcacctcctgctcttcctgaggagacagccacag
catggtgcggtggagctggatggcgttcccatgaaggaaggtgacaggttttcctgtggg
gacctgttcaccctggcagtcaggtatcagcatgacggctctgagacacttactgatgat
atcctctttgctgccaccgacagcatccactcagtagagttcatcttgcaggtcaaggtg
ttgcctgtgaatgatgagccacctgttatgcgaacaggcctcattcctgtcgtacactgc
ctggagggtgaagaagtggtcctttcctcagagtacatttgtgcgacagacgcagacagc
gatgacatgaagctgatgtttacgctggttcgccagccctaccatggggtagtgaggcaa
gctggcattgttgtggatcgtttttcccaagctgatatcatctctggcttagtcacatac
aagcatacaagtggggagattggcctgactccttcctttgagatcttaacctttgttgtc
tctgatggcaaagctggctcagatgcaaatgactgctgttatgatggacttcttcctcct
ccagttccacttcatgatccattgccagtatttgaccttaacatcactgtacttccagtg
gacaaccagccgccatccatcataactggtgcaaggtttgtggtggaggagggctcctca
gcagcccttactgctaaccatttgtttgccactgaccctgataccgctgccgatgactta
gagtttgtcttggtttctcctccccagtttggttacattgaaaatatactgccttctcct
gggtttgagaagagcaacattggtataagtatagcatcctttcagctgaaacacctgaaa
gccctgaatataaactatgtacagtccaggcacattcggattgagccaacatcagacaaa
tttgtactttacgtcactgatgggctgcatcactcagcagagactccatttttcgtgctg
atcaacccaaccaatgatgaagtcccagaattcatagcaagaaacatttctgttcaagag
ggtgagatgaaagagctggatctctctgttatcaatgcagttgatctggatgtgcctcag
gaccatttggtattcagtgttgtgcagaagccctggcatgggtttctcattaatggagtt
catggcaatgatattctacactacaaacagttaattactcatcatcacagccatgaactt
cttgttcatgagttttccatggagctacttatgaatggaatgaagctgatatacatgcat
gatgactcagaaaacctcactgacagctttacaatccagctatcagatgggaaacataaa
gtcctcagaaccatttcagtaaaggtctttcctgttaatgatgagaaaccagtgttgagc
aagaaggatgatatagaggtgaacatgggtgagacccgcatcatttctagtgctgttctg
tcagccaaagataaagatacccccagggagagaatttactatctatttgaaagaattcca
gaaaatggtcagcttcagctcaaggttggcagagactgggtgactctccaaactggaatg
aagtgcacccaggaagaactagatatgaaccttgtaagatacatccatacaggacctata
gggtccaagaaccaagacagcttcacattttatctgtgggatgggtacaacagatcccca
gctgtggacttctacataaatatcaaggacatggaaaggggagctattgctgttttcata
aagcctcttagagtgccaaaaggggatcggggctacattacaacagatgccctccttgca
ttggatggaacggacaaaccggaggagctcctttatgtgataacctccccacctcagtat
ggacagatagagtatgtcagctatcctggcatccccattaccagcttcagtcaaatggat
gtagcaggccagatagtctgctatgttcacaacactgaggcacctgtttctgaagataca
ttcagattcttcatcagcaatggactgaggactaagcatgggacattcacgatctccttg
gaggcagtcgaccaagctttacccactctctctaggaacatggggttaagattagtggaa
ggcgctatggcactcctttctcctgatgtcctgcagctttcagacccagacactgccaaa
gaaaaccttaccttcctcttggctcaggtcccccaaaatggtcatctgtattatcgaggg
gctgtgctactgcagcacaatttcacccagcaagatgtggacaacatggatgttgcatat
aaacaccgaggtggggattcccagattgacagatttacatttgttgcaacagataggact
aatcaaggcttcatcgtgaatgggagggtgcagatcgagccagtggcattcaccattcag
gtggaccatatggacaaaatggcaccaaaaattattcatctccgttgctttactgatgtg
aaactgctgaagaatggcaattacgggatctatattactgccaggtccttgaaagcatct
gatcccaatacagaaaatgacaaaataatttttaagattttacgaggtcctcgttatggc
tacctggaaaatataaccacaggtggttttatccacgaagggtttagccaaaaggattta
aacagtaaaatcgtactttatgtcatcaatccaatgcgggaagtgaattcagatgacttg
gagtttcaagtctcagatcccaatggaaattcagcggtcccccaaatactggaactaagc
tggtctcggattgaaatgcaacagattgaatatgaagtgtgtgagaatgtaggaacggtg
tcgctgacaatcaccagggcaggacactctgcagactctgcctttgttgcagtgaagatc
aacgaaatatctgctgtgttgggaaaggactttacagtgactccttctaagcttgttcag
tttgatccaggaatgtcaaccaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaagtctttgaagtagttctgagctcccctgtgaatgccattcttggcact
aggacaaaagctgtagtgaaaattttggacgcaaaaggaggtcagtgcagctctttccat
tcctctggccaaaataagcatgacttctggggaagaggcacactgtttccagtttcctca
ggctcctcatcaccttccaggcttggcagcattcacttggaagggatcccaccatctcct
tccaaagggatgacagagcatagaggggacgcgctgcaggaacacagcttggcaaatcgg
tcaaggaccaggctgagagtgattggaaatggcagaatagttcacccctcatctgtattt
agaaatggaactgatgtggttttcaaatatcatgggatggtatcgctcagaatagaggaa
gactcctcatcaactaaagcaaacaacaaggctgaagtgtcagtaattaaccaagcccaa
ccacagacagatacaatcgcctctaggaagacagaaatcccacaagctgataaggcagaa
ctggcatctgaaccaagctctaaccatcaggacttttactcctttccaaaggcctgtacg
ccagatttaaaggggctcttgcattatgaagaaagcactcaaaaactgtatcagtgtaat
ggaataatatggaagtcctggaattcccaaagcaaggaagtgagtacgagaaaatgtcct
gctggatggagtcatcatgagggcagctgctatttcctggtagtgaatcacaaggtcacc
tggaatactgctgctcaggcttgtagagaacaatacctggggagtctagcaagtgtggct
aatgaacaacacatgaaatggctgtgggacttcagtgggaggaagcccttttggataggc
ctgaatgaccgagtgaatgctggacattgggagtggaacagtggagaacccatcacctac
ataaactggagaagaggcctctatcgtattccaaagagagggaagaattgcgtattggtg
cagaagcgagggaaatggcaagcaacggactgcaggaaggccaaacagaacagctatata
tgctcaagaaagctgtaa
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