Apteryx rowi (Okarito brown kiwi): 112969949 Help Entry 112969949         CDS       T07573                                  Symbol COPA Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism arow  Apteryx rowi (Okarito brown kiwi) Brite KEGG Orthology (KO) [BR:arow00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:arow04131]     112969949 (COPA)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:arow04147]     112969949 (COPA) Membrane trafficking [BR:arow04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     112969949 (COPA) Exosome [BR:arow04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    112969949 (COPA)   Exosomal proteins of bladder cancer cells    112969949 (COPA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st TPR_COPA_B Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  112969949 NCBI-ProteinID:  XP_025929586 Ensembl:  ENSARWG00000012761 LinkDB All DBs Position Unknown AA seq 1221 aa AA seqDB search MTFYCCFKVFILSLPKETGRDKNRTLSDITNCSSCQPSFSVNLLLLFVGPVRGIDFHKQQ PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRG ITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVD TCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNL NLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSGSKF PVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVAR NRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTL ASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGVFIY TTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLAL INRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALE AAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMMKIA EIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEKE TIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTVGTE GWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAGGAE DGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFLQTY ARGRTTYQALPCLPSMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAGKFE EAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQQKR ICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTRK ILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQICRV TTVTEIGKDVIGLRISPLQFR NT seq 3666 nt NT seq  +upstreamnt  +downstreamnt atgactttttattgttgctttaaagtttttattttatcattgccaaaagaaacagggagg gataaaaatcgtactctaagtgatataacgaactgctccagctgtcagccatctttctct gtcaacctgcttcttctatttgtaggacctgttcgaggtattgacttccacaaacagcag cctctctttgtttctggaggtgatgattacaaaataaaggtctggaattacaaattgcgc cgttgtcttttcactctgcttgggcacttggattacattcgcactaccttcttccaccac gaatatccctggatcttgagcgcttctgatgatcagacaattcgtgtttggaattggcag tccaggacttgtgtttgtgtgctgacaggacacaaccactatgtgatgtgtgcccagttt cacccctctgaggacctggtagtgtcagccagcttggatcagactgtgcgcgtttgggat atttctggcctaaggaagaagaacctgtcccctggagctgtggaatcggatgtcagggga ataaccggggtggatttgtttgggacaacagatgcagttgtgaagcaygttcttgagggc catgatcgtggagtgaactgggctgcctttcaccccaccatgccacttattgtatcagga gctgatgatcgacaagtgaagatctggcggatgaatgaatcgaaggcctgggaggtcgac acttgccgtggacattacaacaatgtctcgtgtgctgtctttcacccgcggcaggaactg atcctcagcaattcagaagacaagagcatccgtgtgtgggatatgtctaaacgcacgggt gtccagacatttcgccgtgatcatgatcgcttttgggtattggctgctcatcccaacctc aacctctttgctgcaggccatgatggtggcatgattgtgttcaaactggagcgtgagcgg cctgcttatgccgtacatgggaacatgctgtattacgtgaaggaccgtttcctccgccag cttgatttcaacagttcaaaggacgttgctgtcatgcagctgcgaagtggttccaagttc cctgtgttcaacatgtcatataacccagctgagaacgctgtcctcctctgcacgagagcc agcaacttggagaacagcacttatgacctatacaccattcccaaggatgcagactcccag aacccggatgcccctgaagggaaacgttcctccgggctaacagctgtgtgggtagctcgt aaccgctttgcagtcctggatcgcatgcattcgatcctaatcaaaaacctgaagaatgag atcaccaagaaggtgcaggtgccgaactgcgatgagattttctatgctggcacagggaac ctgctgctgagagatgcagactccatcaccctgtttgacgtgcagcagaagcgaactctg gcctcggtgaagatctccaaggtgaaatacgtcatctggtcggctgacatgtcccatgta gctttgctggctaagcacgccatcatgatctgcaacagaaagctggagtcactgtgtaat atccatgaaaatatccgtgtcaagagtggtgcctgggatgagagtggtgttttcatctat accaccagcaaccacatcaaatatgctgtcactactggggatcatggcatcatccgcacc ttggatctgcctatttatgttacccgtgtgaagggaaacaacgtgtactgcctggacaga gaatgccgtcccagggtcctcaccattgatcccacagaattcaagttcaaactggcactg atcaacagaaaatatgatgaggtgctgcacatggtgaggaatgctaagctcgtgggccag tccatcattgcctacctgcaaaaaaagggctaccctgaggtggcactgcactttgtcaag gatgagaagacccggttcagcctggcactggaatgcggcaacattgagattgctctggaa gcagccaaggctctggatgacaagaattgctgggagaagctgggagaagtggcattgctg cagggaaatcaccaaattgtggagatgtgctaccaacgcaccaagaattttgataggctc tccttcctctacctcatcactggcaacctggagaagctccggaagatgatgaagatagct gagatccgtaaagatatgagtggccactaccagaatgccttgtatctaggagatgtgtca gagagggtgaggatcctgaagaactgtgggcaaaagtccctggcctatctcacagctgca actcatggtctggatgaggaagctgaaagcctgaaggaaacatttgatcctgaaaaggaa acaattccagacattgatcccaatgcaaaattgctgcagcctcctgcccctatcatgcct ctggataccaactggccgttgctgactgtctccaagggattcttcgaaggaacaattgct agcaaaggcaaagggggtgctttggctgcagatattgatattgacactgttggcactgaa ggctggggtgaagatgcagagttgcagctggatgaagatggttttgtggatgctggagaa ggctttggagaagaaggcctaggtaaaggacaggaagaaggaggyggatgggaagttgag gaagatttggaccttccccctgaactggatgtacctgctggaccagcaggaggagctgag gatggtttctttgtgccacccaccaaaggcaccagccctgctcaggtgtggtgtaacaat tctcagcttcctgttgatcacatcctggcaggctcctttgaaacagcaatgagactcctt catgaccaggtaggagtcacaaacttcggtccctacaagcagctgttcctgcagacctat gcccgtggccgtacgacctatcaagccctgccttgtctcccttccatgtatggatacccg catcgcaactggaaggaagctggcttgaagaacgccctccctgctgttggactgaaactc aatgacctgatccagcgcctgcagctgtgctaccagctcactacggctggcaagtttgag gaagccgtggagaagttccgctccatcttgctcagtgtgcccttgctagtggtagacaac aagcaggagattgctgaggcccagcagctgatagccatttgccgggagtatattgtaggg ctctcaatggagatagagcggaagaagctgcccaaagagaccctggagcagcagaagcgc atttgtgagatggctgcctatttcacccactccaacctgcagcctgtccacatgatcttg gtgctgcgcactgctctcaacctctttttcaaactcaaaaacttcaagacagctgctacc tttgctcgtcggctgctggaactgggtccaaagcctgaggtggcgcagcagacccgcaag atcttgtctgcgtgtgagaagaatcccactgacacctaccagctcaactatgatatgcac aacccctttgacatctgtgctgcctcttaccggcccatatatcgtggcaaacctgtggag aagtgtccactcagtggagcctgctactgtcctgagttccaggggcagatctgccgtgtc accacagtgacagagatcggcaaagatgtcattgggctgcggatcagcccactccagttc cgctag

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