Apteryx rowi (Okarito brown kiwi): 112969959
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Entry
112969959 CDS
T07573
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112969959 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112969959 (SMG5)
03032 DNA replication proteins [BR:
arow03032
]
112969959 (SMG5)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112969959 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
112969959 (SMG5)
DNA replication proteins [BR:
arow03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
112969959 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
112969959
NCBI-ProteinID:
XP_025929603
Ensembl:
ENSARWG00000012227
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLIAGIGFYQHLL
LYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQN
ELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFE
GAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQPKSSSLD
SELTSLCQSVLEDFNLCLFYLPSPPNLNSTSEDEEEYESGYSFLPDLLIFRMVIICLMSV
HSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDDQEPREP
LNSIEKEAEADLANHQPSEEQQKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDS
SQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKS
GPKEALKNCVDGSGLGDSKSPSISKIETPDPATNGPGSLSTNDASIASNLQAMSTQLFQT
KRCFRLAPTFSNILLKPNSEPPVLKDGVDSKPCVNGDLEKPGLAEQDDVSDSEESISSNK
SCRNERSLQEKLEIVTNEGLLPTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLP
SAADLQESGLALCNEVKDMLSGSELPDLSASLLLPEDVALRNLPPLKNAHKRFNFEQDRP
IFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHM
AAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQL
ATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHK
LKRQDLDAWNLYKILDSCKQLTVSQASGEDDTTGMVTIITGFQLEDPSAFSVPMQSALQA
AANASVEIKNVLEFYKQWKEMG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgcatccggtggattatgggagaaaagcagaagaactgctctggagaaaagtt
tactatgaagttatccagctcattaaaacaaataaaaagcacattcacagccgtagcact
ctggagtgtgcgtaccggactcacttgatcgctggcataggattttaccaacaccttctc
ctctacattcagtctcactatcaactggagctgcagtgctgtattgactggactcacgta
acggaccctctcataggctgcaagaaacctgtgtctgcatcggagaaggagatggagtgg
gcacagatggcatgtcacagatgtctggtttatctgggagatctagctcgctatcagaat
gaactggcaggtgtggacacagagttgctggctgagcgattttactatcaagcactttct
gttgcaccacaaattggcatgccctttaaccagctggggacactggcggggagcaaatat
tacaatgtggaagctacctattgctacttacgctgtatccagtctgaagtgtcctttgaa
ggtgcctacgggaacctgaaacggctgtacgacaaagcagccaaaatgtatcaccagttg
aagaaatgtgaaaccagaaagttgtctccaagcaagaaacgatgcaaagacattaagagg
ttgctggtgagctttatgtacctgcagagccttttgcagccgaagagcagctctctggat
tctgagctgacatctctctgccagtctgtgctggaggatttcaacctgtgcttgttctac
ctgccttctcctcctaatctgaactcaactagtgaagatgaagaagagtatgagagtggc
tactccttccttcctgatctcctgatcttccgcatggtgatcatctgccttatgagtgtt
cacagcctcaagagggcaggttcaaagcagtacagtgcagccatcgctttcacrctggcc
ctcttctctcatctgataaaccacgtcaatattcgcctgcaggcagagctagaagaaggg
gaaaatccagtcccagcctttcagagtgatggcacagatgaccaggagccacgggagccc
ttgaactccatagagaaggaagccgaagctgacttggccaatcatcagcccagcgaggaa
caacagaagaatgactgcaagaaaagcaagaaatactcccgtctctcttgtctgcgtcgc
cgccgccacccccagaaggtggacgagagtgacctgagcgagggctttgactctgactct
agccagggctccacaaagggcagcgatggctcagaaagtggctcagagaagagtgacgag
gaggcagaagctgcttttgatgtggagacggactctgacatgaacagccaagaatctcgt
tctgacttggaggacatggaggacgagccgggtgaggagggaagtggccgaggcaaaagc
gggcccaaagaggccttaaaaaactgtgtggatggcagtgggctgggggactctaagagc
ccaagcatctctaaaatcgagactccagatccagcaaccaatgggccagggtccctgagc
actaatgacgcaagcatagccagtaatctccaggccatgtctacccaactgtttcagacc
aaacgctgctttcgcttggctcccactttcagcaacatcctcctgaaaccaaacagcgag
ccgccggtcttgaaggatggagtagacagcaagccatgtgtcaatggagatctggagaag
cctggcttggcagagcaagatgatgtatctgactctgaagaaagcatttcaagcaacaaa
tcctgcaggaatgagcgatcccttcaggagaagctagagattgtgaccaacgaggggttg
cttcccactgtcaaggtgttcctggactggctgaggaccaacacggacctcatcatcatg
tgcgcacagagctctcagagcctgtggaacaggctgtctgtgctcctgaaccttctgcct
tctgctgcagacctgcaggaatcagggctggccctatgtaatgaagtcaaggacatgctg
agcggctctgaactcccagacctcagcgccagcttgctgctccccgaagatgtggccctg
cgcaatctgccccctctgaaaaacgcacacaagaggtttaactttgagcaggaccgaccc
attttctcagcagtggaggagtctgttgttcggatttgctgcatccggagctttggccac
ttcattacccacttgcaaggcagcatcctgcagttcaactcggagcttgggatcttcatc
agcatagctcagtcggagcaagacaacctgctgcaccaggcccaagcccaatttcacatg
gctgctgaggaagctcgtcggaacaggctaatgagagacatggctcagcttcgactgcag
ctggaggtttctcagctggagggaagtctccagcagcccaaagcccagtcggctatgtct
ccttatctcgtcccggacacccaggccctctgccagcacctggctgttgtcaagcagctg
gccactagcgggaggttcataatcatcattcctcgaacagtgattgatggcttagacttc
ctgaaaaaggagaacgcaggtgctcgggacagcatccgatatctggaggcagaatttaaa
aagggaaacaggtacattcgttgccagaaagatgttgggaagagctttgagaggcataaa
ttgaagagacaagatttagacgcctggaacctctataaaatactggacagctgcaaacag
ctgacggtgtcccaggcaagcggagaggacgacaccacaggaatggtcaccatcatcacg
ggctttcagctggaggacccaagcgcgttctcggtgcccatgcagtctgccctccaggca
gccgccaatgccagcgtagaaataaaaaacgtcctggagttctacaagcagtggaaagag
atgggctga
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integrated database retrieval system