KEGG   Apteryx rowi (Okarito brown kiwi): 112969959
Entry
112969959         CDS       T07573                                 
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
  KO
K11125  protein SMG5
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:arow00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112969959 (SMG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arow03019]
    112969959 (SMG5)
   03032 DNA replication proteins [BR:arow03032]
    112969959 (SMG5)
Messenger RNA biogenesis [BR:arow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     112969959 (SMG5)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112969959 (SMG5)
DNA replication proteins [BR:arow03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    112969959 (SMG5)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 PIN_4
Other DBs
NCBI-GeneID: 112969959
NCBI-ProteinID: XP_025929603
Ensembl: ENSARWG00000012227
LinkDB
Position
Unknown
AA seq 982 aa
MFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLIAGIGFYQHLL
LYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQN
ELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFE
GAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQPKSSSLD
SELTSLCQSVLEDFNLCLFYLPSPPNLNSTSEDEEEYESGYSFLPDLLIFRMVIICLMSV
HSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDDQEPREP
LNSIEKEAEADLANHQPSEEQQKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDS
SQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKS
GPKEALKNCVDGSGLGDSKSPSISKIETPDPATNGPGSLSTNDASIASNLQAMSTQLFQT
KRCFRLAPTFSNILLKPNSEPPVLKDGVDSKPCVNGDLEKPGLAEQDDVSDSEESISSNK
SCRNERSLQEKLEIVTNEGLLPTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLP
SAADLQESGLALCNEVKDMLSGSELPDLSASLLLPEDVALRNLPPLKNAHKRFNFEQDRP
IFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHM
AAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQL
ATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHK
LKRQDLDAWNLYKILDSCKQLTVSQASGEDDTTGMVTIITGFQLEDPSAFSVPMQSALQA
AANASVEIKNVLEFYKQWKEMG
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgttcttgcatccggtggattatgggagaaaagcagaagaactgctctggagaaaagtt
tactatgaagttatccagctcattaaaacaaataaaaagcacattcacagccgtagcact
ctggagtgtgcgtaccggactcacttgatcgctggcataggattttaccaacaccttctc
ctctacattcagtctcactatcaactggagctgcagtgctgtattgactggactcacgta
acggaccctctcataggctgcaagaaacctgtgtctgcatcggagaaggagatggagtgg
gcacagatggcatgtcacagatgtctggtttatctgggagatctagctcgctatcagaat
gaactggcaggtgtggacacagagttgctggctgagcgattttactatcaagcactttct
gttgcaccacaaattggcatgccctttaaccagctggggacactggcggggagcaaatat
tacaatgtggaagctacctattgctacttacgctgtatccagtctgaagtgtcctttgaa
ggtgcctacgggaacctgaaacggctgtacgacaaagcagccaaaatgtatcaccagttg
aagaaatgtgaaaccagaaagttgtctccaagcaagaaacgatgcaaagacattaagagg
ttgctggtgagctttatgtacctgcagagccttttgcagccgaagagcagctctctggat
tctgagctgacatctctctgccagtctgtgctggaggatttcaacctgtgcttgttctac
ctgccttctcctcctaatctgaactcaactagtgaagatgaagaagagtatgagagtggc
tactccttccttcctgatctcctgatcttccgcatggtgatcatctgccttatgagtgtt
cacagcctcaagagggcaggttcaaagcagtacagtgcagccatcgctttcacrctggcc
ctcttctctcatctgataaaccacgtcaatattcgcctgcaggcagagctagaagaaggg
gaaaatccagtcccagcctttcagagtgatggcacagatgaccaggagccacgggagccc
ttgaactccatagagaaggaagccgaagctgacttggccaatcatcagcccagcgaggaa
caacagaagaatgactgcaagaaaagcaagaaatactcccgtctctcttgtctgcgtcgc
cgccgccacccccagaaggtggacgagagtgacctgagcgagggctttgactctgactct
agccagggctccacaaagggcagcgatggctcagaaagtggctcagagaagagtgacgag
gaggcagaagctgcttttgatgtggagacggactctgacatgaacagccaagaatctcgt
tctgacttggaggacatggaggacgagccgggtgaggagggaagtggccgaggcaaaagc
gggcccaaagaggccttaaaaaactgtgtggatggcagtgggctgggggactctaagagc
ccaagcatctctaaaatcgagactccagatccagcaaccaatgggccagggtccctgagc
actaatgacgcaagcatagccagtaatctccaggccatgtctacccaactgtttcagacc
aaacgctgctttcgcttggctcccactttcagcaacatcctcctgaaaccaaacagcgag
ccgccggtcttgaaggatggagtagacagcaagccatgtgtcaatggagatctggagaag
cctggcttggcagagcaagatgatgtatctgactctgaagaaagcatttcaagcaacaaa
tcctgcaggaatgagcgatcccttcaggagaagctagagattgtgaccaacgaggggttg
cttcccactgtcaaggtgttcctggactggctgaggaccaacacggacctcatcatcatg
tgcgcacagagctctcagagcctgtggaacaggctgtctgtgctcctgaaccttctgcct
tctgctgcagacctgcaggaatcagggctggccctatgtaatgaagtcaaggacatgctg
agcggctctgaactcccagacctcagcgccagcttgctgctccccgaagatgtggccctg
cgcaatctgccccctctgaaaaacgcacacaagaggtttaactttgagcaggaccgaccc
attttctcagcagtggaggagtctgttgttcggatttgctgcatccggagctttggccac
ttcattacccacttgcaaggcagcatcctgcagttcaactcggagcttgggatcttcatc
agcatagctcagtcggagcaagacaacctgctgcaccaggcccaagcccaatttcacatg
gctgctgaggaagctcgtcggaacaggctaatgagagacatggctcagcttcgactgcag
ctggaggtttctcagctggagggaagtctccagcagcccaaagcccagtcggctatgtct
ccttatctcgtcccggacacccaggccctctgccagcacctggctgttgtcaagcagctg
gccactagcgggaggttcataatcatcattcctcgaacagtgattgatggcttagacttc
ctgaaaaaggagaacgcaggtgctcgggacagcatccgatatctggaggcagaatttaaa
aagggaaacaggtacattcgttgccagaaagatgttgggaagagctttgagaggcataaa
ttgaagagacaagatttagacgcctggaacctctataaaatactggacagctgcaaacag
ctgacggtgtcccaggcaagcggagaggacgacaccacaggaatggtcaccatcatcacg
ggctttcagctggaggacccaagcgcgttctcggtgcccatgcagtctgccctccaggca
gccgccaatgccagcgtagaaataaaaaacgtcctggagttctacaagcagtggaaagag
atgggctga

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