Apteryx rowi (Okarito brown kiwi): 112970024
Help
Entry
112970024 CDS
T07573
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04120
Ubiquitin mediated proteolysis
arow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112970024 (UBE4B)
04120 Ubiquitin mediated proteolysis
112970024 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112970024 (UBE4B)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112970024 (UBE4B)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
U-box type E3
112970024 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
112970024
NCBI-ProteinID:
XP_025929719
Ensembl:
ENSARWG00000001828
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPSTPLTSPQRETPPGPPVVAPAPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RSLILNTGSNPGTSPMFCNVGSFGSSSLSSLYGTSPAPTISFTSYVPMTGSSLTPPASSV
ATTAVPSISVSSHLTATSPSGIQPSSPRYRPYTVAHSGGFSASSIPRSLSISIPSSSPSP
PVTATSPLGMPVVMSRQRPMAMGPPLFTASPSTLRRRSSLLNRIPSSIYDNPFSLLFLAV
SDVSEDSSDEENEDDDFSCVQFGSSVGGSGSSSVSDSCSDHFTIETCKETEMLNYLIECF
DRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLC
RNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLALASKECSLDSDNFKYPLMALCELCEI
KFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSG
PAITLENTRVVSQSLQHYLELARQELFKILHSILLNGETREAALSYMAAVVNANMKKAQM
QTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRIDLPTDETRVKATMEDV
TAWIAELYRDQSSFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLK
NNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLM
LRILDPAYPNIKLPLAPEVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMF
LVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETV
DMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEI
VAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQT
LTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagattcgtcgaaggcgccttgctcggttggcaggtggg
ccatcttcccagcccagtacgccacttacgtcaccccagcgagagaccccacctggacca
cctgtagtagcaccagccccggggccatcccacagtctaggcctaaatgtccatagcatg
accccagctacctctccaattggtgcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcactcagcagttctccatctaacagccttgaaacacaatctcagtctctc
tctcggtctcagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggaattgaaaatatggaagtcgatgagaatgatcgcagagagaaaagg
agtttgacggataaggagcctctgtctgggtctgaagtatctgaggaacaagctttacag
ctggtctgtaagatcttcagagtttcttggaaggaccgagatagagatgtcatcttcctg
acttcgctctctgcccaatttaagcagaacccaaaggaagtgttttccgattttaaggac
ttgattggacagattttgatggaagttctgatgatgtccacccagtcaagagatgaaaac
ccgtttgccagcctgacagctacatcgcaaccaattgctgcagctgcccggtcacctgat
agaagcctgattttaaacactggctccaacccaggaaccagccctatgttctgtaatgtg
ggctcctttggttccagttcattatccagtctctatgggactagtccagctcctactatc
agtttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccaccacagcagtgccttccatttctgtcagctctcacctcacagcaacaagcccttct
gggatccagccctcctctccgaggtaccggccatacactgttgcccattctggaggcttt
tcagcttcttccatcccacgttccttgagtatttccatcccatctagttcaccaagtcct
ccagtcacggctactagccctctgggcatgccagtcgtcatgtccaggcagagacccatg
gcaatgggtccacctttgtttactgcttcacccagtaccttgcgcaggcgttcttcttta
ctgaacaggattccttctagtatatacgacaaccctttctccctcctcttccttgccgtt
tctgatgtgtctgaggacagtagtgatgaagaaaatgaagatgatgatttttcttgtgtc
cagtttgggtccagtgtgggaggctctggcagctcaagtgtttccgattcctgcagtgac
cacttcaccattgaaacttgtaaggagacagagatgctgaactacctcattgagtgtttt
gacagagttggaatagaggagagaaaagcaccaaagatgtgtagccagccaacagttagt
cagctactgagcaacatccgatcacagtgcatttcccatgccgctttggtgctacaggga
tccttaacgcaaccaaggtcattgcagcagcagtctctgctggtaccatatatgctgtgt
aggaacctcccatttggcttcatccaagaattggtgagaacgacttaccaggatgaagag
gtgttcaaacagatctttatccccatcttacaaggcctggctctggcttccaaagagtgc
tctctggatagtgacaactttaaatatccccttatggcattatgtgaactttgtgaaatc
aagtttgggaaaacacaccccatgtgcagtttggttgtatctttgcccttgtggttgcct
aaatctttaagcacaggtgcaggaagagaactgcaaagactttcctatcttggagccttc
ttcagtctctctgtctttgctgaagatgataacaaagttgttgaaaagtacttctcaggg
cctgccattactcttgaaaacacccgggttgttagccagtctttgcaacattacctggaa
ttagcaaggcaagagctgttcaaaattctacacagtattttactgaatggcgaaactcga
gaagcagctctcagttacatggcagctgttgtcaatgccaacatgaagaaggcacagatg
cagacggatgatcgtttggtatctaccgatggctttatgctcaactttttatgggtacta
cagcagctaagtacgaagataaagctggaaacggttgatcccacatacatctttcatccc
aggtgtcgtattgaccttccaacagatgagacgagagtgaaagcaacaatggaggatgtt
acagcctggattgctgagctttacagggatcagtcttcattttctgagccgaaattccca
acggaatgtttcttcctcaccctgcatgcccatcatctctccatcctgccaagctgccgc
cggtacatacgtagactgcgggccatcagggagctcaacaggaccgttgaagatctgaaa
aacaatgaaagtcagtggaaggattctcctcttgctaccaggcatcgagagatgctgaaa
cgttgcaagacacaacttaagaaactggtgaggtgcaaggcttgtgcagatgctggtttg
ctggatgagaactttcttaggcgatgtctgaatttctatggcatggtgattcagctgatg
ctccgcattcttgaccctgcctatcccaacataaaactgcctttagctcctgaagttccg
aaggtatttgcagcgttgccagagttttatgtggaagatgttgctgaatttttgtttttt
attgtacaatatgctcctcaggtgctttatgagccctgtactcaggacattgtaatgttc
cttgtcgtgatgctgtgcaaccagaactacatccgaaatccttatttggtagccaagctg
gtggaagtgatgttcatgacaaatccagctgttcagccccggacacagaagttctttgaa
atgattgagaatcatcctctctccactaaattgttagtcccctccttgatgaagttttac
acagatgttgaacatactggagctactagcgaattctatgacaagtttacaatccgctac
cacatcagcaccattttcaaaagcctctggcagaatatagctcaccatggtacattcatg
gaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaatgacaca
actttcttgctggatgagtctctggagtccctaaaacgtatccatgaagtgcaagaggag
atgaagaataaagaacagtgggacctgctgcccagggatcagcagcaggcccggcagtcg
cagcttgctcaggatgagcgtgtctctcgttcatatcttgccctggcaacagaaactgtt
gatatgttccatatccttaccaagcaggttcaaaagcctttcctcagacctgaacttgga
ccacgattggctgctatgctgaactttaacctacagcaactgtgcggccccaagtgccgt
gacctgaaagttgaaaaccctgagaaatatgggtttgaaccaaagaagctgttggaccaa
ctgactgatatttatctacagttagattgtgctcgctttgctaaagcaattgctgatgat
cagaggtcctacagcaaagagctctttgaggaggttatttcaaagatgagaaaggctgga
atcaagtcaaccatagcaatagaaaaattcaaactgctggcagagaaagtggaggaaatt
gttgccaagaatgctcgtgcagaaattgattacagtgatgctccggatgaattcagagat
ccactcatggacactctgatgactgatcctgtcaggctgccatctggaactattatggac
aggtccatcatcctgaggcatctgttgaactcttccactgatcctttcaatcgtcagacg
ctgaccgaaaatatgctggaaccagtgccagaacttaaagagcaaatccaagcctggatg
agagacaagcagaatgctgatcattaa
DBGET
integrated database retrieval system
