Apteryx rowi (Okarito brown kiwi): 112970151
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Entry
112970151 CDS
T07573
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112970151 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112970151 (HBS1L)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112970151 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
112970151
NCBI-ProteinID:
XP_025930013
Ensembl:
ENSARWG00000004395
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPAAFAEPLEEEYG
YEGTEDTAGYFTTNHQLSGVDRARLNSCLDQMREVLGESVPEQTTVQAVLDSKFDVQKAL
DLVLSQDSKQNMKTKNEDAVIIGKTTKGKSRDSQXARMESEIVRKVTKMTVSGKKQSMGF
EVPCAIAEENGHVNTPQKGLLAEDASVTSGVLEAVSKSALSPQIVQVSEEQNMVPTPVKK
SSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEIISKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSDELAKWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKVITVVITDQGSGFCVTGKIEAGYVQVGERLLAMPPNETCT
AKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTHFRARILIFNI
EVPITKGFPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRP
VALELYKDFKELGRFMLRYGGSTIAAGVITEIKE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggctataactacgacgaagattttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccctcaacagcagctcaattt
atctactcaagacgagacaaaccagcagcatttgctgagccattagaagaggaatatggc
tatgaaggtacagaagatactgctggttactttacaaccaatcatcaattgtctggagtt
gacagagcccgtcttaattcatgccttgatcaaatgcgagaagttttgggagagtctgta
ccagagcaaacaacggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatcttgtgctttcacaagacagtaagcaaaatatgaagaccaagaatgaggacgctgtg
attataggaaagacgacaaaaggaaaatcaagggattcccagwcagccagaatggaatct
gaaattgtgcgaaaagttaccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgctattgctgaagaaaatggccatgttaacacacctcagaaaggactg
ttagctgaagatgccagtgtaacttctggggtacttgaggcagtctcaaaatctgctctt
tcaccccaaatagtgcaggtttcagaagagcagaatatggtgcctactccagtgaaaaag
tcaagcaagacaaaaccacaaatagatgtgaaagcggagctggagaagagacaaggcgga
aagcaactgcttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctgctctaccttttgggaaatgtgaacaaaagaactatgcacaagtatgagcag
gaatctaagaaggctggcaaagcttcgtttgcctatgcatgggtcttggatgaaactggg
gaggagagagaaaggggagtaacaatggatgtgggtatgacgaaatttgagacaaagact
aaagtaattacattgatggatgctccgggccataaagacttcattccaaatatgatcaca
ggagccgcacaggctgatgtggcggttttggttgtggatgctagcagaggagagtttgaa
gcagggtttgagactggcggacaaactcgagaacatggattattagtgcgttctcttgga
gtgacacagctagctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaaga
tttcaggaaattatcagtaagcttggccagtttcttaaacaagctggttttaaggagtct
gatgtggcttatatcccaacaagtggtcttggtggagaaaatctagtcacaaggggtcag
tcagatgaactcgcaaagtggtataaaggaaaatgtttgttagagcaaattgattctttc
aagcccccacaaagatcagtggataaaccatttaggctgtgtgtcgctgatgtttttaaa
gttattactgttgttattacagaccaaggatcaggattttgtgtgactggtaaaatagaa
gcaggctatgttcaggttggagaacgacttctggcaatgcctcccaatgaaacttgcact
gcaaaaggaattacactgcatgatgaaccagttgattgggctgcagcaggagatcacgtt
agtctcactttgaccggcatggatatcatcaaaatcaatgttggctgtgtattttgtgat
cccaaggaacccattaaagtttgtactcatttcagagctcggattctcatctttaatatt
gaggttccaatcactaaaggatttcctgtgcttttacactatcaaaccgtaagtgaacct
gctactattagaagattattgagcgtcctgcacaaaagcactggtgaagtgacaaagaaa
aaacctaagttccttactaaaggacagaatgctttaatagaactacagactcaaagacct
gtagctctagagttgtataaagactttaaagagcttgggaggtttatgttacgctacggt
ggttccactattgctgcaggagttatcacagagattaaagaatga
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