Apteryx rowi (Okarito brown kiwi): 112970191
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Entry
112970191 CDS
T07573
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112970191 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112970191 (PAN3)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112970191 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
112970191 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
112970191
NCBI-ProteinID:
XP_025930092
Ensembl:
ENSARWG00000008811
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MVAARCRRGITIGVGLQEGFECTENSDLGDQLRKSSMCKEPPRSKFRLLREKWTNVPGID
GGGLADASLTDSYFSTSFIGVNGFGSPTETKYPMMQRMTNSSSSPSLLSDSAKQYAGHDP
LTSPNSSLFNDFAALSLSQRRKLAKPAFPSFITDLEDRYNTVLPRKYRLGMLDERIVPVG
SKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVS
QSNMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNS
ANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPVTGMVFPNYHIYHP
AAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDSYHSLFPLE
PLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHS
NIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQHDGPLPR
QHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGIFDVLT
FDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKN
LILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKL
GTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVP
EKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggccaggtgccgccgaggtatcactataggagtgggccttcaggaaggattt
gaatgcacagaaaatagtgaccttggggaccagctcagaaagagttccatgtgtaaggaa
cctcctagaagcaagtttagactgctgcgggaaaaatggacaaatgttcctggaatagat
ggcggtgggttagctgatgctagtctcacagattcctactttagcaccagcttcattggc
gttaatggatttggaagtcccactgaaacaaagtatcccatgatgcagaggatgacaaat
agcagcagctcccctagccttctcagtgacagtgccaagcagtatgcaggccatgatcca
ctaacttcaccaaattcatccttgtttaatgactttgctgccctcagcctgtctcaaagg
aggaagctggcaaaaccagcatttccttcgtttatcactgacttggaggacagatataat
acggtcttgcccaggaagtatcgactggggatgctggatgagaggatagttccggtggga
tcaaaagcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgtaaaacggga
gtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagacaccaaat
cctactgcaagtgaatttattcctaaaggaggatcaacctccaggctgagtaatgtatcc
cagtcaaatatgtctgccttctctcaagccctgttctctcacccctccatgggaagtcct
gctactgctgggctagcaccaggaatgtcactgtcagcaggatcttctcctcttcattcc
cccaaaataactcctcatacatctcctgctcctcgaagaagaagtcatactcccaactca
gcaaactatatggtgcctactagtgcctccgcttctgttgctaatgctgtctctcagcct
ccatctactggccaggtgatccagaaggaaacagtgggtggaacaacatacttctatact
gatacaactccagcacctgtcacaggaatggtattcccaaattaccacatttaccatcca
gctgcacctcatgttgcttacatgcagcctaaagcaaatgcaccttccttcttcatggca
gatgaactcagacaggaactgatcaacagacacttaataactatggcccagattgatcaa
gctgatattcctgcagttcctgcggaagtggacagctaccacagtctctttcccttagaa
ccactgccaccacccaatcggatacagaaaacaagcaactttgggtacattacatcatgc
tataaagctgtaaatagtaaagatgacctgccatattgccttcggaggatacatggtttt
cgtcttgttaacacaaagtgcatggtattggttgacatgtggaaaaaaattcagcactca
aatatagtaaccttgcgtgaagtatttaccactaaagcatttggagaacattctcttgtg
tttgcgtacgattttcatgctggaggagagactatgatgagcagacacttcaatgaccct
agtgctgatgcttatttcacaaaacgaaaatggggtcagcatgatggacctttgccacgg
cagcatgcgggattgcttccagagtctctgatatgggcatatattgtgcagctcagctct
gcattacggaccattcacacagcaggactggcctgccgagttatggatccaacaaagatt
ctagtaactggcaaaacaaggttacgagttaattgtgttggaatctttgatgttttaaca
tttgataacagtcaaaataatccgctggcattaatggctcagtttcagcaagcagatctg
atctccctggggaaggttgtgttggctttggcttgcaattctttatcaggaattcagaga
gagaatttgcagaaagcgatggaattggtgacaatcaactattcctctgatctgaagaat
ctgattttgtatttgctgactgaccaaaacaggcttcgcagtgtaaatgatatcatgcct
atgattggtgcgcgattctatactcagttggatgctgctcaaatgcgaaatgatgttata
gaagaagaccttgcaaaggaggtgcaaaatggaaggttgtttaggcttctagcaaaattg
ggaacaatcaatgagaggccagagtttcaaaaagacccaacgtggtcagaaactggagac
aggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaagcgggtact
ccttggattgacctcagtcacattatctcatgtcttaacaagttagatgctggtgtgcca
gaaaaaataagcctcatttccagagatgagaagagtgtacttgtggtaacttacagcgat
ttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaatggtcagttg
tag
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