KEGG   Apteryx rowi (Okarito brown kiwi): 112970435
Entry
112970435         CDS       T07573                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow03013  Nucleocytoplasmic transport
arow04141  Protein processing in endoplasmic reticulum
arow04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:arow00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112970435 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112970435 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    112970435 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arow03019]
    112970435 (SEC13)
   04131 Membrane trafficking [BR:arow04131]
    112970435 (SEC13)
Messenger RNA biogenesis [BR:arow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112970435 (SEC13)
Membrane trafficking [BR:arow04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    112970435 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    112970435 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    112970435 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_RIG_2nd WDR55 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_WDR41 NBCH_WD40 WD40_RFWD3 MIOS_WD40
Other DBs
NCBI-GeneID: 112970435
NCBI-ProteinID: XP_025930628
Ensembl: ENSARWG00000015120
LinkDB
Position
Unknown
AA seq 306 aa
MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNIL
ASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSY
TGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIW
KEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSP
KLLHKFTDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTE
GQQNEQ
NT seq 921 nt   +upstreamnt  +downstreamnt
atgatacatgatgctcagatggattattatggcactcggttagcaacctgttcttcagac
agatccgtgaaaatctttgatgttcggaatggagggcaaatcctcatagcagatctaaga
gggcatgaaggtccagtgtggcaagttgcctgggctcatcctatgtatggaaatatccta
gcttcctgttcctatgacaggaaggttattatttggaaagaagaaaatggcacttgggaa
aagacatatgagtacacaggacatgattcctcagtgaattctgtctgctgggcaccacat
gactatggattgatattggcctgcgggagctctgatggggccatttcgttattgagctac
acaggtgatgggcagtgggaagtcaaaaagatcagcaatgcacatactattggatgtaat
gctgttagctgggctcccgctgttgtaccaggaagccttatagaacagccatctggtcaa
aaaccaaactacatcaaaagatttgcatctggtggctgtgacaaccttgttaagatctgg
aaagaagaagatggccagtggaaagaagagcagaagctggaggctcatagtgactgggtt
cgagatgtagcctgggctccatccataggtttgccaacaagtaccattgctagctgttca
caggatggcagagtgtttatctggacatgcgatgatgcctctggaaattcatggtcacca
aaattgctgcacaagttcactgatgttgtctggcatgtgagctggtccattactgcaaat
attcttgcagtgtctggaggagacaataaagtcacgctatggaaggagtcagtagacgga
ctgtgggcatgcatcagtgatgtcaacaagggccaaggaggagtgtctgccgttacagag
gggcagcagaatgagcagtga

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