Apteryx rowi (Okarito brown kiwi): 112970447
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Entry
112970447 CDS
T07573
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arow04131
]
112970447 (TMF1)
Membrane trafficking [BR:
arow04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112970447 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
NPH-II
CCDC39
Motif
Other DBs
NCBI-GeneID:
112970447
NCBI-ProteinID:
XP_025930643
Ensembl:
ENSARWG00000018803
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEEGPWADAVIPDYGDGTNSLISGGWDTS
SWGLNSXTEPQTQPISPTAITKPVRRTVVDESENFFSAFLSPTDVQSIQKNPVVSKPPAK
SQRPKEEVKSTLKESLHTGQLEVPVTTEAEVKDSSVADLVDLKNLDIPKEKSEENSVLKS
NAKHEASTNEVTDKKVSALNLKVPEEAVNEKSSVGRDGAGGALDSTSQSLNTGTKDMGLE
TKEQKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSASSRQEAADSKSSLHL
MQTSFQLLSTSACADYNRLDDFQKLTESCGSSDAFERIDSFSVQSLDSRSVSEINSDDEL
SGRACASASVTVIPPVPKIEMVDPVKSKCEELNDTPVLHAEEAEMEESGRSATPVNSEQP
DVLVATVQADEEQIVKEETVLQQDAVENLLEEDSEKQELKKVIDSLTEKLEKREIQLLST
SKEKARLEEAYDNLKDEMFRMKEESSSISSLKEEFAQRIADAEKKLQLACKERDAAKKEV
KNVKEELATRLNCNETAELLKEKDEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKEKEREN
TNTKQNKKIKEMEEELQHLKQVLDGKEDLEKQHRDSIKQLNSVVERQEXDLSKLQAEVED
LEERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAQDEAR
QQQEALAIQVADLRLALQRTEQQAARKEDYLRQEISELQQRLQEAESRNQELSQSVTSAT
RPLLRQIENLQATLGAQTSSWEKLEKNLSDRLGESQALLAAAAERERAATEELLSNKVQM
SSTESQNSLLRQENARLQAQLEAERTRLKKMENENSRYEVELEGLKDEYAKTLEDAKKEK
MLLATQLEMEKMKVEQERKKAIFVQEAAKEKDRKSFTVETVSSTPSMSRSSSISGVDMAG
LQTSFLSQDDPHDHSFGPISTSGSNLYDAIRMGAGSSIIENLQSQLKLREGEISHLQLEI
GNLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRAQLKDLDQRYNTILQMYGEKAEEAE
ELRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcgcagctgtccagcttcgccaagcaggcgctgtcgcaggcg
cagaagtccatcgacagggtgctggacatccaggccgaggaggggccctgggccgacgcc
gtcatccccgactacggcgacggaacgaattctcttataagtggaggatgggatacatct
tcctggggtttaaattcaartacagaaccacagactcagccgatatctccaacagcaatc
accaagccagtaaggagaacagtagtagatgaatccgaaaacttcttcagtgcctttctc
tctccaactgatgttcagagtatacagaaaaatccagtggtgtccaaacctccagccaaa
tcccagcgacccaaagaggaggtgaaaagcactttaaaggaatctctacacactggtcag
ctggaagtaccagtgacaacagaggcagaagtgaaagattcctctgtagctgacctagtg
gacttgaaaaaccttgatattcccaaggagaaatcagaagagaattctgtgcttaaatct
aatgccaagcatgaagcaagcacaaatgaagttactgataaaaaagtgtctgctctaaat
ttgaaagtacctgaagaggctgttaatgaaaagtccagtgttggaagggatggagcagga
ggtgcactggatagcacttcacaatctcttaatacaggtacaaaagacatgggtttggaa
actaaggagcaaaaaactgaggacaggcaaagcaatacaccttcacctccaattagcact
ttttcctcagggacatccacaactagtgatattgaggttttggaccatgaaagtgtaata
agtgagagctcagcaagttcaagacaagaagctgcagactcgaaatccagtcttcatcta
atgcagacatcatttcagcttttatctacatctgcctgtgcagattataatcgtttagat
gacttccaaaaactgactgaaagctgcggctcctctgatgcttttgaaagaattgattca
tttagtgtacaatctttagatagcagaagtgtaagtgaaataaattcagacgatgaatta
tcaggcagggcttgtgcttcagcgtctgtcactgtcattcctcctgtgccaaagatagaa
atggttgatcccgtgaaaagtaaatgtgaagaattgaatgacactcctgttttacatgct
gaggaagctgagatggaagagagtgggagaagtgcgacccctgttaattctgagcagcca
gatgttttggttgctactgtgcaagctgatgaagaacagattgtgaaagaggagactgtg
ctgcagcaggatgctgttgaaaatctgcttgaagaagactccgaaaagcaagagcttaaa
aaggtgattgattcattgactgagaaactggagaagagagaaatacagttattgagtact
agtaaagaaaaggcacgcctggaagaagcttatgataacctaaaagatgaaatgtttaga
atgaaagaagagagcagcagcatttcgtctcttaaagaggagtttgctcagcgaatagca
gatgctgaaaagaagctccagcttgcatgcaaagaaagagatgcagctaaaaaggaagta
aagaatgttaaagaagaattggctactagactkaattgtaatgaaactgctgaattactg
aaagaaaaagatgagcaaatcaaaggattaatggaagaaggagaaaagctttccaaacag
cagttgcacaattccaacattattaagaaactaagagcaaaggagaaagagagagaaaat
actaacacaaaacagaacaaaaagattaaggaaatggaagaggaattgcagcatttaaaa
caggtacttgatggcaaggaagatcttgagaagcagcatcgagacagcattaaacaactg
aacagtgtcgtagagcgacaagaaaakgatcttagtaaacttcaggcagaggtggaagat
cttgaagaacggaacagaagtgtccaggcagcacttgacagtgcatacaaggaacttgca
gatcttcataaagctaatgctacaaaggacagtgaggcacaagaagcagccctaagtcgg
gaaatgaaggcaaaggaagaacttggtttagctttggagaaggcccaggatgaggcacgg
cagcaacaagaagctttggcaattcaggtggcagacctgaggctagcgctgcaacgcaca
gaacagcaggcagcaagaaaagaagactatttacgtcaggaaatcagtgaactacaacag
agacttcaagaagcagagagtcggaaccaagaactgagtcaaagtgttacatctgctaca
cggccacttctccgtcagatagaaaatttgcaagccacgctgggagcacagacctcctca
tgggaaaaactggaaaagaacctttctgacagacttggtgaatctcaagcccttctggca
gcagctgctgagagagaacgggctgctacagaagaacttctttctaataaagttcagatg
tcttctactgaatctcagaatagtcttttaaggcaagaaaaygctcgtcttcaggctcaa
ctagaagcagagagaaccagactgaagaaaatggaaaatgaaaacagtagatacgaggtt
gaactagaaggtctcaaagatgagtacgcaaaaacccttgaagatgcaaagaaagaaaag
atgctgttagctactcagttagaaatggagaaaatgaaagtcgaacaggaaagaaagaag
gcaatttttgtgcaagaagcagcaaaggagaaggatcggaagtcatttacagtwgaaacg
gtttcaagtactccaagtatgtcacgttccagttccataagcggagttgacatggcaggt
cttcagacatctttcctctcacaggatgatcctcatgatcactcatttggaccaatatct
actagtgggagcaatctttatgatgctataaggatgggagcaggttcaagtataattgaa
aaccttcartcacagttaaaactaagagaaggagagatttcacatctacagctggaaatt
ggaaaccttgaaaaaacacgatcaataatggcagaagaacttgttaaattaacaaatcaa
aatgatgagcttgaagagaaagtgaaggaaataccaaaattacgtgcacagttaaaggat
ttggatcaaagatacaatacaattcttcaratgtatggagagaaagcagaggaggctgaa
gaactccggctagaccttgaagatgtgaaaaacatgtacaagactcagatagatgaactt
ttaaaacaaagacaaaattaa
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integrated database retrieval system
