Apteryx rowi (Okarito brown kiwi): 112970546
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Entry
112970546 CDS
T07573
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow00600
Sphingolipid metabolism
arow01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112970546 (SMPD4)
Enzymes [BR:
arow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
112970546 (SMPD4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
112970546
NCBI-ProteinID:
XP_025930813
Ensembl:
ENSARWG00000018878
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSFLAARSDFSYRSPQATLKADCVNKPFVQRCHELETVIEEFPAKELHGIFPWLVESIFG
SLDGIIVGWNLRCLQGRTNPTEYSVALDFLDPSGPMMKLVYKLQAEEYRYDFPVSYLPGP
VKASIQEQVLPECSLYHNKVQFPSSGGLGLNLALNPFEYYMFYFAISLITQKNSPITHHV
SPSNSAYFILVDTYLKCFLPTEGSVLPPPSSNPGGAIPSPTPRSPAVPFTSYGMHHTSLL
KRHIAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLS
ISSKHHGSPAQSSYQALHAYQESFKPTEEHVLVVRLLVKHLHAFSNSLKPEPLSPSAHSH
TASPLEEFKRVVIPRFVQQKLYIFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKPP
QSAEPLPRSVSEKWAAFIQENLLMYTKLFVGFLNRALRTDLVSPKNALMVFRVAKVFAQP
NLAEMILKGEQLFLEPELVIPHRQHRLFMTPTLGGSFFSSWPPTITDASFKVKSHVYSLE
GQDFQYKQMFGAEVRNLVLKLAQLICQAQQTAKSISDHSAETLASQSFFSWFRFTPSDMN
GSYTGNDLDEIGQDSIKKTDEYLEKALEYLCQIFKLNEAQLTQMMMKCGTAQDENGKKQL
PDCIESEDGLILTPLGRYQIINGLRRFEVQYQGDTELQPIRSYENATLVRLLFRLSSALN
QRFADQMEVLCSREDFIGKLCRYHLINPHLAQKTRYIPMSKDRTSHNWGPRISLRFLASY
RTLTSLLMIYFIASWFYIGPVGCTFIILFGYFLYAILMTFFSEGWKPHQH
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcctggcagcgcgatctgatttctcttatcgttcaccacaggccactttgaag
gcagattgtgtaaacaaaccatttgtccagagatgccacgagctggagacagtcattgag
gagtttcctgccaaggaattgcatggcatcttcccatggttggtggagagcatttttggt
agcctggatggcatcatcgtaggttggaatcttcgctgtttgcaaggaagaacaaaccct
accgaatattcagtggctttggatttcctagatcccagtggcccaatgatgaagctggtt
tacaaactccaagcagaagagtacagatatgatttcccagtctcctatcttccaggtccc
gtgaaggcttcaatacaagagcaagtcctaccagaatgctcattataccacaacaaagtc
cagtttccttcatctggtggtttaggtttgaatttggctcttaatccatttgaatattac
atgttttactttgcaattagtttgattacacagaagaactcgcccatcacccatcatgtc
agcccttccaacagtgcttatttcatcttggtggacacttacctgaagtgtttcctacct
acagaaggaagcgtccttcctccaccttcttccaatcctgggggagccatcccttcccct
actcccaggtctccagcggtgcctttcacttcctatggcatgcaccacactagtttgctg
aagcggcacattgcccatcagccttctgtgaatgctgacccagcttcccaggagatctgg
agatcagaaacactgctccagatctttgttgaaatgtggcttcaccattattcactggaa
atgtaccagaaaatgcagtcccctcatgtcaagctggaggttctccactacagactcagt
atctccagtaaacaccacggtagtcctgcccaatccagctaccaggccctccacgcatac
caagagtcattcaaacccactgaagagcatgtgctagtggtaagactgcttgtgaagcac
ctgcatgcttttagcaacagcctgaaaccagagcctctctccccttcagctcactcccac
acagccagcccactagaagagtttaaaagggttgtgattcctcggtttgtccagcagaaa
ctttacatctttctacaacactgttttggccactggcctctggatgcctctttcagagca
gttctagagatgtggttaagttacttgcagccttggaggtatgctcctgaaaaaccacct
caaagcgcagagcccttgcctcgcagcgtgtcagagaaatgggctgccttcattcaagaa
aacctacttatgtataccaagctgtttgtaggatttttgaaccgagctcttcgaacagat
ttggtcagtccaaaaaatgctctcatggtgttccgagtagccaaagtcttcgctcagccc
aacctagctgaaatgatcctgaaaggagaacagttattcttggagccagaacttgttatt
ccccatcgtcaacaccgactttttatgacccccacgctcggtgggagcttcttctcatcg
tggcctccaactattacagatgcctcatttaaggtgaagagtcatgtttacagcctggaa
ggacaggacttccagtataaacaaatgtttggcgcagaagtcaggaatttggtgttaaaa
ctggctcagttgatttgtcaggcccagcagacagcaaaatccatatcagaccattctgca
gagacactggctagccagtccttcttttcatggtttagatttacaccatccgatatgaat
ggttcctacacaggcaatgaccttgatgaaattgggcaagacagcatcaaaaagacagat
gaatatttagagaaggcactggaatatttgtgtcaaatctttaagctgaatgaagcccaa
ctgacccagatgatgatgaagtgtgggacagctcaggatgagaatggaaagaaacagctt
ccagactgcattgaaagtgaggatgggctcattctcacaccccttggcagataccagatc
ataaatggcttacgtagatttgaggtacagtatcagggagatactgagcttcagcccatc
cgaagctacgaaaatgctactcttgttcgcctcctattccgtttatcctcagcacttaac
caaaggtttgctgatcagatggaagtactttgctccagggaggattttattggcaagctt
tgccgctaccatcttatcaacccacaccttgcacagaaaacgaggtatattcctatgtcg
aaggacagaacaagccataactggggaccaagaatcagtctgaggtttctagctagctac
aggactctcacttccttgctaatgatctacttcattgcatcctggttttacattgggcca
gtaggttgcacattcattatcctgtttggatattttctttatgccatactaatgactttc
ttctctgaaggatggaaacctcatcaacactaa
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