Apteryx rowi (Okarito brown kiwi): 112970791
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Entry
112970791 CDS
T07573
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112970791 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arow04131
]
112970791 (VPS8)
Membrane trafficking [BR:
arow04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112970791 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
zf-RING_Vps41
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112970791
NCBI-ProteinID:
XP_025931356
Ensembl:
ENSARWG00000009291
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCES
RCLFSGSKGEVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYG
RMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQKQLHLHYDL
INFTWINSRTAVLLDSVEKLHVIDRQTQEELETIEISEVQLVYNSSHFKSLATGGNVSEA
LALVGEKACYQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQERLTDALALAWSFY
EGKAKAVVGLSGDTSKRKAVIADRMVEILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVI
VDYCLLLQRTDLLFNQIYDKMCENSVAKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQ
DKNRLENMEACIVHMDITSLDIQQVVLLCWENRLYDAMIYVYNSGMNDFISPMEKLFKVI
APPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHS
TEGSVDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENS
DFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQ
AGGIVQFEENRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLRDPVRKEEVFNYIHNIL
SMPGYSAEEKQSVWQKALDHIEELLLLSPSKAADLVAIHFGEQIERIITNLQDQFLLFQF
LRSLLDPREGINQDLIHLPPCITEQFIELLCHYSPDQVLETLKVLEYCRLEEAIQITQKH
QLHEASSYLLEKKGDIHGAFLVMLERLQSKLLMLTQDDESSAELPPLENIEDTLMKTIAL
CQRNSHNLNQQQREALWFPLLEAMMSPQKLSGSSQYRYSESLKSLTMQVLNNMAAFIALP
SILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASV
TRGLTPKQDYCCICLQQYKRRQETADEIIVFSCGHLYHSLCLLSKECGLVTKGLMRWTCY
KCNSSSKGGKLSENFSELKKGSGTSLAQVGSESPLDPQQIQAFDQLCRLNRGTSRLALLT
ELSRNHGGEKHGLLSVSHGDPATSSVFQNENFQLHLAPPPLTED
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatctggccagtgggaagctgctacgatcaataacagatgctcatcccccagga
acagccatcttgcacatcaagtttacagatgacccgacgcttgcaatttgcaatgacagc
ggaggctccgtatttgaactgtcatttaagagggtgatgggagtgagaacgtgtgaatct
cgatgtctcttcagtggctcaaagggagaagtttgctgtattgaaccactacatgcaaaa
gttgagctgagagaccatcccattacccagtattcactgctggccatggcctccctaaca
aagatacttgtcattggcttgaagccatctctgaaagtgtggatgactttcccctatggt
cgtatggacccttccagtgtccctcttctggcgtggcacttcgtggctgtgcagaactct
gtgaaccccatgcttgccttttgtcgaggagacgtcgttcattttcttctggtaaagagg
gatgatactggtgcgatacacgtcactaagcagaagcagcttcatctacactatgacctc
atcaattttacttggataaactcacggacagcagtgcttctggacagtgtggagaagctg
catgtgatagatcgccagacacaagaggagctggagaccatagagatctcggaagttcag
ctagtctacaacagcagccacttcaaatccctggcaacggggggcaacgtcagcgaagca
ctggcattggttggagagaaggcttgttatcagtccatcagcagttgtggcggtcagatc
ttttaccttggaactaagtctgttcacgtcatgacattgaggagctggagagagagagtt
gaccaccttctgaaacaagagcgtctcactgatgccttggctctagcttggtctttttat
gaaggtaaagcaaaggctgtagtaggcttgtctggggacacaagcaagcggaaagcagtc
attgcagacagaatggttgaaatccttctccattatgccgatcggactttgaagaaatgt
cctgaccaaggaaaaatccaggttatggagcaacattttcaggacgtggtgcccgtcata
gtcgattactgtctcttactccagcgcacggatctattatttaaccagatatatgataag
atgtgtgagaattctgtggctaaaggcatctttctggagtgcttggagccatacatctta
agtgataagttgatgggaatcacagctcaagtgatgaaagacttgctccttcacttccaa
gacaagaacagactggaaaatatggaagcttgcattgtgcatatggatatcaccagctta
gacatccagcaggtagttcttctgtgctgggaaaaccgtctctacgatgccatgatctat
gtgtacaacagtgggatgaatgacttcattagtcccatggagaaactgttcaaagtcatt
gctcctccgctgaatgctgggaagtctctcacagatgagcaggtggtaatgggcaacaag
ctgctcgtgtatataagctgctgcttggcaggccgtgcatatccattgggtgatattcct
gaagatctggtacctttggttaaaaatcaggtcttcgaatttctcatccggctgcattca
actgagggatctgtggatgaagaggtctatccttatgttcgtaccttgctgcacttcgac
actcgggaattccttaatgttcttgctctgacttttgaagattttaagaatgacaagcaa
gctgtggaatatcaacagagaattgtggacatacttctgaaagtcatggtggagaattct
gacttcaccccatcgcaggttggctgcctctttaccttccttgcccgtcagctcgccaag
cccaacaacacattgtttgtgaacaggacgctttttgaccaggtccttgaattcctgtgc
agtcccgatgatgattcccgccattctgagaggcaacaggtccttttagaattgctccag
gcaggagggatagtacagtttgaagagaaccgccttatccaaatggcagaaaaagctgaa
ttctatcagatttgtgagttcatgtatgaacgagagctccgctatgacaagatcattggc
tgttacttgcgtgatccagtgagaaaggaggaagttttcaactacattcacaacatcctc
tctatgcctgggtacagtgctgaagagaagcagtcagtgtggcagaaagctttggaccat
atagaggagttgttgttgctgagcccctctaaagcagccgacttggtggccattcacttc
ggtgagcagattgagcgcatcattacaaaccttcaggaccagttcttactcttccagttt
ctgaggagtctccttgacccaagagaaggcatcaatcaggacctgatacacttaccgccc
tgcatcactgagcagttcattgagctgctgtgtcactacagcccagaccaggttttggag
acrctgaaagttctggaatactgcaggctggaagaagccatccagataacacagaaacat
cagctccatgaagcgtcctcgtatttactggagaagaagggagatatccatggtgccttt
ctggttatgctygagcgattgcagagcaagttgctgatgcttacgcaagacgatgaaagt
tcagcagaactgcccccgctagaaaatattgaagatacgttaatgaaaacaattgctctt
tgccagaggaattcacacaatttaaaccagcagcaacgagaggccctctggtttcccctg
ctggaggctatgatgtccccacagaaattgtctggttcttcacaatatcgatactctgag
tccttgaagagtttgacaatgcaagtgctaaacaacatggctgcgtttattgcccttccc
tcaatcctgcagagaattctccaggatcccgtttatggaaaagggaaacttggagaaatt
caaggacttgtcctgggcatgctggacacttttaactacgaacaaacccttttagagaca
actacgaatcttttaaaccatgatctccactggtccctgtgtaacctaagagcttctgtc
actagagggcttaccccaaagcaggattactgctgcatttgtctacagcagtacaaaaga
aggcaagaaactgctgatgaaatcattgttttcagctgtggccacttgtaccattccctg
tgtctgctgagtaaagagtgtggcttagtaaccaaaggcctgatgagatggacgtgctat
aagtgcaactcaagcagcaagggaggaaaactgagcgagaacttctcagagttgaaaaaa
ggaagtggaacatccttggcgcaggtgggttcagagtctccgttggatcctcagcaaatc
caagctttcgaccaactctgccgactcaaccgaggaacctccagattagctctcctgact
gaactgtctcgcaatcacggcggtgaaaagcatgggctgctcagcgtttcccacggtgac
cccgccacgagcagcgtcttccagaacgagaatttccagctccatctggccccccctccg
ctcaccgaagactag
DBGET
integrated database retrieval system
