Apteryx rowi (Okarito brown kiwi): 112971024
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Entry
112971024 CDS
T07573
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04510
Focal adhesion
arow04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112971024 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112971024 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
112971024
NCBI-ProteinID:
XP_025931823
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MSLVISVPVKQCVRLCVQADAKRPPSAMGLNMPRALQDWAFGDFGGRRSKSSHEAVPVWD
SIRSLEHARGDASLWVPAPVVALRSGGWWVQAAQLGGFGMRHATTEAEMGEVESVKLIIL
LFQEDKKCFICDSEDPFHDALNPDSHRIENVVTTFAPNRLKLWWQSENGLENVTIQLNLE
AEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQIYRYFAYDCESSFPGISTGPMKKVDDV
ICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFIKLHTLGDNLL
DSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLN
CEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVCDGCQHN
TVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLIAGQCRC
KLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCKRLVTGK
QCNQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCKCRPHMFGRQCNQVEPGYY
FISLDHYIYEAEEANFGPGVNIIERQYTQDRTPSWTGVGFVRVPEGAYLEFYIDNIPYSM
EYEILVRYEPQLPDQWEKAVVSVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSRYIVLPR
PVCFEKGLNYTIRLELPQYSSVDTEMESPYTLIDSLVLMPYCKSLDIFTVGGSGEDVVTN
SVWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCDPS
GGQCQCRPNVVGRQCDRCAPGTFGFGPNGCRSCECHLRGSYNAFCDAETGQCHCFPGVYG
RQCDRCLPGFWGFPSCQPCHCNSHADDCDPHTGACHGCRDRTAGHSCERCLPGYYGDPVL
GSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCNVGYIGSRCDECAAGFFGSPGE
VGGACQPCQCNGNIDATDPEACDKETGTCVKCLYHTEGENCHLCKQGYYGSALQQDCRKC
VCNALGTAREHCDAAGNCRCEAATGQCRCLPSVVGRACDRCAPRTWRLASGAGCEPCDCD
AARSLAPACNEFTGQCQCMPGFGGRTCRECQELFWGDPGVECRACDCNPRGIQTPQCDRA
TGQCVCNEGVEGPRCDRCSRGYSGFFPNCVPCHQCFALWDVVIGQLANRTQQFLDRANAL
KITGVTGPYQQTLNTLEEKLSEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVTVQIADI
EESLSALALKSNSTDTDLSTLETDARSLDRVVKELAEQLEFIKISDVRGALDSITKYFQM
SLEAEDRVNASTIHPGSVVEMSAQTRQEVEDIINEKEAEFKAKQEEQSRLLDELAGKLQS
LDLSEVAEKTCGAPLGVSCAESECGGLNCRTAEGQKKCGGPGCDGLVTVAHNAWQKAMDF
DRDILSALAEVEQLSKMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEDLRNLIKQI
REFLMQDSADLDSIEAVANEVLNMEMPSTPQQLHALTEDIRERVESLSDVEVILQQSAGD
IARAEMLLQEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKGTQDLL
TSIESENAASEETLNNATLRLFKLEKSVEDLKQKATTNSENVDNIEEKIGVAKKNAEEVK
QVLNNELNSKYKTVEDLIAKKTEESADARRKADMLQDEAKALLAQANSKLQLLKDLENTY
ENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggttatttccgtaccagtgaagcaatgcgtcagactgtgcgtgcaggcagat
gccaagcgtcctcctagtgccatgggtttgaacatgccgcgtgctttgcaggattgggcc
tttggggattttggggggagaaggagcaagtcctcgcacgaggcggttcccgtttgggac
agcataaggagtctggagcatgcgagaggggacgcgtcgctgtgggtgccagccccggtc
gtggccctcaggagtgggggctggtgggtgcaggctgcccagctgggaggatttggcatg
cggcatgccaccaccgaagctgaaatgggtgaagtggaaagcgtaaagctgattatcttg
ttgtttcaggaggacaaaaaatgtttcatatgtgactccgaggatcccttccatgatgct
ctcaatcccgatagccatcgtattgaaaacgtggtcaccacgtttgctccgaatcgcctg
aagctttggtggcagtcagaaaatggtctggaaaacgtgactatacagctgaacctggag
gctgaatttcatttcactcatctcattatgacgttcaagacattccgtcctgctgcaatg
ctaatagaaagatcatctgattttgggaaaacatggcaaatatataggtattttgcatat
gactgtgagagctcatttcctggaatttcaactggacccatgaagaaagtggacgatgta
atttgtgattcccgatactctgacattgaaccttcaactgagggagaggtaatatatcgt
gttttagatcctgcttttagaattgaagatccatacagtccaaggattcaaaacctctta
aagatcacaaatctgagagtcaaattcatcaagctgcacacactgggagataatctcttg
gattcaaggatggagatcagggagaagtactactatgccatttacgacatggtggttcgc
gggaactgtttctgctacggacatgccagcgagtgtgcgccggtggacggcttcaatgaa
gaggtggagggaatggtccatgggcactgcatgtgcagacataacaccaaagggttaaac
tgcgaacagtgtttggatttctaccatgacttaccctggcgaccagccgaaggccgcaac
agcaatgcatgcaaaaagtgcaactgcaacggccactccagccagtgccacttcgacatg
gccgtgtacatgaccacggggaacaccagtgggggcgtgtgtgacggctgccagcacaac
acagtggggcgcaactgcgagcagtgcaagcccttttacttccagcaccccgagagggac
ctgcgggaccccgacgtctgtgagccttgcaactgtgacccagctggctcccagaacggt
ggaatatgtgatcgctacactgatttctctactggcctgattgctgggcaatgccgctgt
aaattgtttgtcgaaggagagcgttgtgacctctgcaaagaagggttttacggcctgagt
gccgatgacccagcgggttgtcagtcttgtgcatgcaatcctctgggtacccatcccgga
gggaatccttgcgattcggagacaggaaactgctattgtaaacgtctggtaacaggaaag
cagtgcaaccagtgtctgcctgagcactggggtctgagcaacgacatggatggatgtcgg
ccttgcgattgcgaccagggaggagccttgaacaacaactgctcgagcgagtctggccag
tgcaagtgccggccccacatgtttggacgtcagtgcaatcaagtcgagcctggctattac
ttcatttcgctagaccattacatctatgaggctgaggaagccaactttggtcctggagta
aacataatagagcgccagtacacgcaggaccgcacgccgtcctggactggcgtcgggttc
gtgcgcgtcccggagggggcctacctggagttttacattgacaacatcccctactccatg
gagtacgagatcctggttcgctatgagccgcagttgccagatcagtgggaaaaagccgtt
gtcagcgtgtcacggccgggcaagatccccacaggtagccgatgtggcaacacggttcct
gatgacgacaatcaggtcgtctcgctctcgcccggctccagatacatagttcttccccgc
ccggtgtgctttgaaaagggcctgaattacacaatccgcctggaactgccccagtactcc
tcggtcgataccgagatggagagcccctacacgctcatcgattctcttgttctcatgccg
tactgcaaatcactggacatattcacagtgggaggctcgggcgaagatgtggtcacaaac
agcgtctgggaaactttccagagataccggtgcctggagaacagcaggagtgttgtgaaa
accccaatgacggacgtctgcaagaacataatcttcagcatttctgctctcttgcatgag
accgcgttatcgtgccagtgcgacccccagggctcactgagctcggtgtgtgaccccagc
ggaggacagtgccagtgccgccccaacgtggttggaagacagtgcgacagatgcgctccc
ggcaccttcggctttggccctaacggatgcaggtcttgcgagtgccatctccgaggctct
tacaacgccttctgcgacgcggagacgggccagtgccactgcttccccggggtgtacggg
cggcagtgcgaccgctgcctgcccggcttctggggcttccccagctgccagccctgccac
tgcaacagccacgctgacgactgcgacccgcacaccggcgcctgccacggctgccgcgac
cgcacggccggccacagctgcgagaggtgcctgcccggctactacggagaccctgtcctg
ggatcgggcgaccactgccgcccttgcccttgccctgatggccccgaaagcggacgccag
tttgccagcggctgctaccaggatccggtcacgctgcaggtcgtgtgcgtctgtaacgtg
ggatacatagggagccgctgtgatgagtgtgcggctggcttcttcgggagccccggcgag
gtcggcggcgcctgccagccctgccaatgcaacggcaacatcgacgccaccgaccccgag
gcctgcgacaaggagacggggacgtgcgtgaagtgcctgtaccacacggagggcgagaac
tgccacctctgcaaacagggctactacggcagcgccctgcagcaggactgccggaagtgc
gtctgcaacgcgctgggcaccgcgcgggagcactgcgacgccgcggggaactgccggtgc
gaggcggccacggggcagtgccggtgccttcccagcgtggtggggcgcgcctgcgaccgc
tgcgcgccccgcacgtggcggctggccagcggcgccggctgcgagccctgtgactgcgac
gccgcccgctccctcgcgcccgcctgcaacgagttcacggggcagtgccagtgcatgccg
ggctttggaggccgaacctgccgggagtgccaggagctcttctggggcgaccccggcgtg
gagtgccgagcatgcgattgcaaccctcgaggcatccagacgccgcagtgcgaccgcgcc
acaggacagtgcgtctgcaacgaaggggtggaagggccgcgctgcgacaggtgcagccgg
ggctactcgggcttcttccccaactgcgtgccgtgccaccagtgcttcgccctctgggac
gtggtcattggccagctggccaacaggacccagcagttcctggacagagctaatgccctg
aaaatcacgggcgtcaccggcccgtaccagcagacgctcaacaccctggaggagaaactc
agtgaaattaaaaccatcattgctcaaaatccggccgccgaacccctaaaaaacatcggc
aatctcttcgaggaagcagaaaagctgacagcagatgttaccgttcagatagctgacata
gaagaaagcctttcagcattagccctgaaaagcaatagcacagacactgacctgagcacg
ctggagactgacgccaggagcctcgaccgcgttgtgaaggagctcgcagaacagctggag
ttcatcaagatctctgatgtgcggggagccttggacagtatcaccaagtacttccagatg
tccctcgaagcagaagacagggtcaatgcctccaccattcaccccggcagcgtggtggaa
atgtcagcgcaaacgcgccaggaggtggaagacataatcaacgagaaggaggctgagttc
aaggcgaaacaggaggagcagtcgcgcctgctcgacgaactggcgggcaagctgcaaagc
ctggatctctccgaagttgccgagaagacatgcggagctcccttgggagtatcgtgcgcc
gaatcagagtgtggcgggttgaactgccgaacagccgagggacagaagaagtgtggggga
cctggctgtgacgggctggtgactgtagcacacaacgcctggcagaaagccatggatttt
gacagagacatcctcagtgccttagcagaagttgagcaactctctaaaatggtttctgag
gcgaaacagagagcagatgaagcaaaacaaaatgcccaggaggttctgctcaaaaccaac
gctacgaaagaacaagtggacagaagcaacgaagatctgagaaacctcattaaacagatc
agagaattcctaatgcaagacagtgctgacctggacagcattgaggcagtggctaacgaa
gtgctgaacatggagatgccaagcactccccagcagctacatgctctgacagaagatatt
cgtgagcgtgtagaaagtctttctgatgtcgaggtcattctgcagcagagcgctggggac
attgccagagcagaaatgctattgcaagaagctaaaaaagcaagcaaaggtgcaacggat
gttaaagtcactgcagacatggtaaaagcagcactggaagaagctgaaaaagctcaaaat
gcagctgaaaaagccatcaaacaagctgatgaagatattaaaggaactcaagacctgctg
acctcaattgaatctgaaaatgcagcatctgaagaaacattgaacaatgctaccttacgc
ctgtttaagctagaaaagagtgttgaagatcttaagcaaaaggctactacaaactcagag
aatgtggacaatatagaagaaaaaattggtgttgcaaagaaaaatgctgaagaagttaaa
caggtcctcaataacgagctgaacagcaaatataaaacagtggaagatctcattgccaaa
aagacagaagaatcagctgatgctaggaggaaagctgacatgttgcaagatgaagctaaa
gcgctgttggctcaagcaaacagcaaactccagctgctcaaagacttggagaatacatat
gaaaacaaccaaaaagttctggaagacaaagccaagcagttggtggagctggaagagaca
gttcgctccctcttacagacaatcagccagaaagttgctgtttatagcacttgcttataa
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