Apteryx rowi (Okarito brown kiwi): 112971059
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Entry
112971059 CDS
T07573
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112971059 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112971059 (CNOT4)
03019 Messenger RNA biogenesis [BR:
arow03019
]
112971059 (CNOT4)
04121 Ubiquitin system [BR:
arow04121
]
112971059 (CNOT4)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112971059 (CNOT4)
Transcription factors [BR:
arow03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
112971059 (CNOT4)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112971059 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112971059 (CNOT4)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112971059 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-RING_2
zf-C3HC4_2
Rtf2
DZR_2
Nairovirus_Gn
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
112971059
NCBI-ProteinID:
XP_025931873
Ensembl:
ENSARWG00000016493
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MFLLIVWQVESSLLTRPSSADLFAPLSYYKLLLLCEHIKMSRSPDAKEDPVECPLCMEPL
EIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNE
KKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKV
VINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGTTKYCSYFLK
NMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGTVDK
NKNKVSALQRPNSNNKDAWPSLQSSSKSANGLTVEHRKTPPILENGTDPEHMTPDGADSD
FGPIDKPSDSLSIGNGDSSQQITNSDTPSPPPGLSKPNPVIPISSSNHSARSPFEGAVTE
SQSLFSDNFRHPNPIPSGLPPFPSSPQTSNDWPTAPEPQSLFTSETIPVSSSTDWQAAFG
FGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQPSLSPTSLQNPTPHTTAAKGPGSG
FLHPAAPTNANSLSSTFPVMPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLN
HTANPTSNSNFLDLNLPPQHSTGLGGIPISDNSSSVESLNMKEWQDGLRALLPNININFG
GLPNASSPSNANHSVPTSNTATTDSLNWDSPGSWMDPAIITGIPASTGNSLDTLQDDNPP
HWLKSLQALTEMDGPSAAPSQTHHSNPFGTQIPLHRASWNPYSPPSNPTSFHSPPPGFQT
AFRPPSKTPTDLLQSSALDRH
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttgattgtttggcaggttgaatcctctttgctaaccagaccttcaagtgct
gacctttttgctccattaagttattataaacttttgctgctctgcgaacatataaagatg
tctcgcagccctgatgctaaggaagaccctgtggaatgtcccctttgcatggagcctctg
gagattgatgacatcaacttcttcccttgcacctgtggctaccaaatatgtcgtttctgt
tggcaccgtatccgcactgatgagaatggactttgtcctgcttgcagaaagccataccca
gaagatccagcagtgtacaaaccactctcccaggaagagctgcaaaggataaaaaatgaa
aagaaacagaaacaaaatgagaggaaacagaagatatcagagaaccgcaaacacttggcc
agtgtacgagttgtacagaagaaccttgtctttgtggtagggctatctcagcgcctagca
gatccagaggttttgaaacgaccagaatattttgggaagtttggtaaaatacacaaagtt
gtcattaataacagcacatcatatgcaggctcacagggtccaagtgccagtgcatatgta
acctacatccggtcagaagatgctctcagagccatacagtgtgtcaataatgtggtggta
gatggcagaacacttaaggcatcattaggtacaacaaaatactgcagttattttctaaag
aatatgcagtgtccaaagccagactgcatgtatctacacgagctgggagatgaagcagcc
agtttcacaaaagaggaaatgcaggcgggtaagcaccaggaatatgaacagaaactactg
caagaactatacaaactaaaccccaactttctccaattatctacgggtacagttgacaag
aacaagaataaagtgtcagcactgcagagacccaacagtaataacaaagatgcctggcca
tcattacagagttcaagtaaatcagccaacggtttaacagtggagcacaggaaaacgcct
cctatattagaaaatggcacagacccagaacacatgactccagatggtgcagactcagat
ttcggccctatcgacaaaccttcagattccctcagtataggaaacggtgacagctctcag
cagataacaaacagtgacacaccttcaccaccacctggtttatcaaaacctaatccagtc
atacccatcagttcatctaatcacagtgcacggtccccttttgaaggggctgtaacagaa
tcacagtcgctcttctctgacaacttccggcaccccaaccccatcccaagtgggctccct
ccattccccagttctccacagacttccaatgactggcccacagcaccagaaccacagagc
ctcttcacatcagaaactataccagtgtcctcctctacagactggcaagcggcttttggg
tttggttcctccaaacaacaagaggacgacttagggtttgacccctttgacatcacccgc
aaagccttagcagacctgattgagaaggaactgtcagtccaagaccaaccttccctctcg
cccacatctcttcagaaccccaccccacacactacagctgccaaagggccaggctctgga
ttcctgcatcctgctgcacccacaaatgccaactctctcagtagcacctttccagtcatg
ccacagaggttcccgcagtttcaacagcaccgagcagtttacaactccttcagttttcca
ggccaagcagctcgctatccttggatggccttcccacgcaatagcatcatgcacttgaac
cacacagcaaatcccacctcaaatagtaatttcttggacttgaatctcccgccacagcac
agcacaggtctgggagggatccctatatcagacaacagcagttctgtagagagtttaaat
atgaaggaatggcaggacgggctaagggcacttctaccgaacattaacatcaactttggt
ggactgcccaatgcttcttccccctccaacgccaaccacagtgtaccaacgtccaacact
gccaccaccgacagcctgaattgggacagccctggcagctggatggaccccgcaatcatc
acaggtatcccagcctccacaggaaacagtttagacacccttcaagatgacaatcctcca
cattggctaaaatctcttcaggccctcacagagatggacggccccagcgcagcgccgtca
cagacgcaccacagtaaccccttcggcacacagatcccgctgcacagagccagttggaat
ccctactctcctccttcaaaccccaccagtttccactcccccccaccaggctttcagaca
gccttcagaccccccagtaaaaccccaacagatctactacagagctcagcgctggatcgt
cattag
DBGET
integrated database retrieval system
