Apteryx rowi (Okarito brown kiwi): 112971064
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Entry
112971064 CDS
T07573
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04140
Autophagy - animal
arow04148
Efferocytosis
arow05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112971064 (VPS16)
04148 Efferocytosis
112971064 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112971064 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arow04131
]
112971064 (VPS16)
Membrane trafficking [BR:
arow04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112971064 (VPS16)
Hops complex
112971064 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
112971064
NCBI-ProteinID:
XP_025931899
Ensembl:
ENSARWG00000005241
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MDCYTANWNPLGEEAFYRKFELYAMEWSLKEDLRDCLVAAAPYGGPIALLKNSGRKEKSP
SARPLLEIYSASGLLLASIPWKSGQLVHLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLTTNIDDLKLRRMPEVPGLQKPPSCW
AVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPAAGAYLRMAVSFNYRCLALFTDT
GYIWMGLSTLKEKLCEFNSSIRSPPKQMVWCMRPRSRQRAVVVAWDRQLMVAGNSTECIQ
FVLDEDSYLVPELDGVRILSRTSHEFLHEIPEASQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKDQKLLPEAVSQCIEAAGYEHEPETQKSLLRAASFGKCFIDKFPPESFVR
MCQDLRVLNAIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRICEYLRLSEIQG
VSRILAHWACYKVQQKDKSDEEVAHAINQKLGDTPGISYSEIAARAYDCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERKTLKDLYNQDDNHQELGNFHVHSSYSEQRIEGRVGALQNAVDAYYKA
KNEFAAKATEDQIKLLRLQRHLQEDFDKPYLDLSLHDTVSNLILDGHHKRAEQLYREFKI
PDKRYWWLKISALATRGDWEEMEKFSKSKKSPIGYLPFVEISVKHHNRYEAKKYAPRVTP
EQRVKAFILVGDLDQAADAAIEHKNENEMNFVLSKCTASTDVAVVEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggccaactggaacccgctgggcgaggaggccttctaccggaagttc
gagctgtacgccatggagtggagcctgaaggaggacctgcgggactgcctggtggcggcc
gccccgtacggggggcccatagctttgctgaagaacagcggcaggaaggagaagtctccc
agcgcccgcccgctgctggagatctactcggcctcggggctgctcctggccagcatcccg
tggaagagcggccagctggtgcacctgggctggacggccagcgaggacctgctgtgcatc
caggaggacggcaccgttctcatctacaacctcttctgcgagttcaagcgtcacttcagc
atgggcaacgaggtgctgcagaaccacgtgctggaggcgaaggtcttccacacggagtac
ggcaccggcgtggccatcctcaccggggcgcaccgcttctccctgaccaccaacatcgat
gacctgaagctgcgcaggatgcccgaggtgccaggtctgcagaagccgccctcctgctgg
gccgtgctctcccaggacagggtgaccatcgtcttgctggcggtcggccaggatctctac
ctgctggacaacacatcctgctccgtggtgaccccacctggcatgagccccgctgctggg
gcctatctgcggatggccgtgtccttcaactaccgctgcctggcgctcttcaccgacacg
ggctacatctggatggggctgtcgacgctgaaggagaaactctgcgaattcaacagcagc
atccgatctccgcccaagcagatggtttggtgcatgcgtccccggagccggcagcgtgcc
gtggtggtggcctgggatcgtcagctcatggtggcagggaactccacggagtgcatccaa
tttgttctggatgaggactcctacctggtgccggagctggacggggtccggatcttgtcc
cgcacctcccacgagttcctgcacgagatcccagaggccagccaggagatctttaaaatt
gcctccatggccccgggggcactgctgctggaggcgcagaaggagtacgagaaggagagt
cagaaggcagacgagtacctgcgggagatcaaggaccagaagttgcttccggaggcagtg
agccagtgcatcgaggcagccggctaygagcatgagcctgaaacccagaagtccctgctc
agggccgcctcctttgggaagtgcttcatcgacaagtttcccccggagagcttcgtgcgc
atgtgccaggacctgcgggtgctcaacgccatccgggactatcagatcggcatccccctc
accttcacccaatacaagcggcttaccatcgaagtcctgctggacaggctggttctgcgg
cggctctaccccctggccatcaggatctgcgagtacctgcgcctctcggagatccagggc
gtcagccggatcctggcgcactgggcctgctacaaggtgcagcagaaggacaagtcggat
gaggaggtggcccacgccatcaaccagaagctgggtgacacgccaggcatctcgtactcc
gaaatcgccgcccgggcttacgactgcggcaggacrgagctggccatcaagctgctggag
tacgagccgcgctccggggagcaggtcccgctgctgctgaagatgaagcggagcaagctg
gccctgagcaaagccatcgagagcggggacacggacctggtctacactgtcgtgctccat
ctgaagaacgaactgaaccgcggcactttcttcatgacgctgcagaaccagccggtggcc
ctgagcctgtaccgccagttctgcaagcaccaggagcggaagacgctgaaggacctgtat
aaccaggacgataatcaccaggaactcggcaacttccacgtccactccagctactcggag
cagcgcatcgaggggagagtaggggctctgcagaaygccgtggacgcgtactacaaagcc
aagaacgagtttgctgccaaggccacagaggatcagatcaagctcttgcggctccagcga
catctccaggaggacttcgacaagccctaccttgacctctcactgcatgacaccgtctcc
aacctgatcctggacggccaccacaagcgggccgagcagctgtaccgggagttcaagatc
cccgacaagcggtactggtggctgaagatcagtgccctggccacccgtggagactgggag
gaaatggagaagttctccaagagcaagaagtcgcccatcgggtacctgcccttcgtagag
atctccgtgaagcaccacaaccgctacgaggccaagaagtacgctccccgcgtgaccccg
gagcagcgagtcaaggccttcatcctggtgggggacctggaccaagcggccgacgctgcc
atcgagcacaagaacgagaacgagatgaactttgtcctgtccaagtgcaccgccagcacc
gacgtcgccgtggtggagaagctgaaccgggccagagcccagctcctgaagaagtga
DBGET
integrated database retrieval system
