Apteryx rowi (Okarito brown kiwi): 112971151
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Entry
112971151 CDS
T07573
Symbol
SDC3
Name
(RefSeq) LOW QUALITY PROTEIN: syndecan-3
KO
K16337
syndecan 3
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04514
Cell adhesion molecules
arow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112971151 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112971151 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arow00535
]
112971151 (SDC3)
Proteoglycans [BR:
arow00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
112971151 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
112971151
NCBI-ProteinID:
XP_025932051
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All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
INTDCSRDLLHEPDLIFVPVWYRNQETXSTCQDAQRWRNENYERPVDLEGSGDDDPFGDD
EMDDVYSGSGSGYFEQESGLETAVSLTTDMSITLPTTAALLPVTLVQPVATPFEMLPAED
TTPEQMTSILYIPRMTEAPVIPSWKATTTSTTARDSPSTTTTTTTTTAASTTAVPTAKPT
TVRRFLPPFVTKAATTRPTTLETPTTSVLETSTATELVTSRLSPSSTAKPRSLPKPSTSR
TADLTEKSTVLPSSPATLPPTEAPQMEPGEVSTVLDNELEVPVSGGPSGDFEIREEEDTT
RPELNNEVMAAVTPPSGPGLGRNAEPGLIDNTIDSGNSAAQLPQKNILERKEVLIAVIVG
GVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ataaacaccgactgctcccgagatttattgcatgagcctgacctaatttttgttccagtc
tggtatagaaaccaagaaacttgaagtacttgtcaagatgcccagcgctggcgcaatgag
aactatgagaggcctgtggacctggaaggttctggggatgacgatccctttggggatgat
gaaatggatgatgtctactcaggctctggctcggggtattttgagcaggagtcaggactc
gaaacagcagtgagcctcaccacggacatgtccatcacgctccccaccaccgcagccctg
ctgcccgtcaccttggtgcagcccgtggcaaccccctttgaaatgctccctgcagaggac
accacccctgagcagatgaccagcatcttgtatatccccaggatgacagaggcaccagtg
atccccagttggaaagcaaccacaaccagtaccactgccagagactcccccagtaccacg
acaacgaccaccaccacaactgctgccagcaccaccgccgtgcccaccgccaagcccacc
accgtccggaggttcctgcccccctttgtcaccaaggcagccaccacccggcccaccacc
ctagagacgcccaccacctccgtccttgagaccagcacagcaacagagctggtcacatcg
cggctttccccctccagcacagccaagcccaggtccctgccaaaaccaagcacctccagg
actgcagacctcacggaaaaaagcactgtgttgccatccagtcctgccacgctgccgccc
acagaagccccccagatggagccgggagaggtgtcgacagtgctcgacaatgagctggaa
gtcccggtcagcggcggccccagcggggactttgaaatccgggaggaggaagacacgact
cgtcccgagctcaataacgaggtgatggccgcagtgacgcctccatcagggcccgggctg
ggcaggaacgccgagcccgggctcatagacaatacgatagactctggcaactccgccgct
cagctcccacagaaaaacatcctggagaggaaagaagtgttgatagcggtgattgtgggc
ggcgtggtgggagccctctttgctgccttcctggtcatgctgctcatctaccggatgaag
aagaaggatgaggggagctacacgctggaggagccaaagcaggcgaacgtgacgtaccag
aagcccgacaagcaggaggagttctacgcrtag
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