Apteryx rowi (Okarito brown kiwi): 112971438
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Entry
112971438 CDS
T07573
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112971438 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arow03036
]
112971438 (ERCC6)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112971438 (ERCC6)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112971438 (ERCC6)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
112971438 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
112971438
NCBI-ProteinID:
XP_025932645
Ensembl:
ENSARWG00000015323
LinkDB
All DBs
Position
Unknown
AA seq
1545 aa
AA seq
DB search
MPKDNSRLPGNIQEQDLVTTASNNCLHNTEDLGVEQESGFCSNDQSNSLGIPSSANQPST
SMAAPLEVPRRGQPLLHINRQQIQSISYSAQAAELKGLGVDVYDQDVLEQGVLQQVDHAI
NEANKATRTVDAEKEYQSVLDDLRFHVVICFWLCALCDLDGSISSVFLYKELQRIKCLTG
SCTISLKQINKIIEQLSPQAATNKDVNRKLDSVKRQKYNKEQQLKKIKAKQKRLQAILAG
TGILDEINDVEIEDDEEPGPSSGPLHLGSMLMPVQETEWEELIRTGQMTPFGTKIPQKPK
RQPRQLMLNETSDFEKYLADQAKLSSERKKLSLLKRAKKKAQAKNVQRTSPTSITKEKRS
KARTLSKTDKRLKEHMNKLQKRALQIQSKAGIPKEKKYLEAKEKLRHEQNDDSGESEYVP
DEEFFDPEAAEDEEQQASSHAENDSDYELRTLSGKGKYLVKRDFKEAEDDADFFPSSEEE
EEHTVGKRKIKRWRDDGDEDYYKQRLRRWQKEGLKDKEHHMAEELSDESDTEFEEGFKVP
GFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSN
YRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIASCHGI
LITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQN
NLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINP
YLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVYQILNGDMQIFSGLV
ALRKICNHPDLFSGGPRTLKCVPDAEVEEADQFGYWKRSGKMIVVESLLKIWHKQGHRVL
LFTQSRQMLQILEVFVRDRNFSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGI
GVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFK
QFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDVSQGTETSAIFAGTGSDVQVPKHQLKRK
LKKPPDNDTSEGGLHLAESSSRKYSKPSSSTSHMANSSSKAIKSSDEMKGDLETFDQNSY
AKDNAQATTNINSWSKSKEKSLERAEKSVSQSLPDNAGSSENAECLGTVVTGEVHGAANV
NAEGGFGLACGAAGSWEEQDAKTEDGQLNNHHYKCTSKTKHRVDMLPHESHKDKSKRKKH
HKDAKFEGERIPHLVKQKQYRKEDSEEKEKGLKKNDDYVLEKLFKKSGVHSVMKHDAIME
ASSADYVLVEAEANRVAQDALRALKVSRQRCLGAASGVPTWTGTSGLSGAPSGIKSRFGQ
KRNPMLLSPHSACASPGSKCKDTGTVKKENDKRSNSNGHFDGKSETGESSSSTLDSSSLL
SKMRARNHLTLPQRTESEGDENLQQAPAPAPGSTEYDELLVDVRNFIAFQAHVDGEASTQ
EILQEFESKLPAAQSCVFRELLRNLCTFHRSPNGEGVWRLKPEFR
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagacaacagccgcttgccaggcaatatccaagaacaagaccttgttaccact
gcaagcaataattgcttgcataatactgaagatttgggagttgaacaagaaagtggcttt
tgtagcaatgaccagagtaatagtcttggcattcccagctctgctaatcagccatccact
tctatggctgctcctttggaggttcccagaagaggacaacccctcttacatatcaacagg
cagcagattcagtctatttcatatagtgctcaggctgcagagctcaaaggtttaggagtt
gatgtctatgatcaggatgtattggagcaaggagtcctgcagcaagtagatcatgcaatt
aatgaagctaacaaagcaacaagaacagttgatgcagagaaagaatatcagtcagtgctg
gatgacttaaggtttcatgtggttatctgcttctggttatgtgctttatgtgacttggat
ggctccatatcatcagtgttcttgtacaaagaacttcaaagaatcaaatgcttaactgga
tcgtgtacaatatctctgaaacaaataaataaaattatcgagcaactttcacctcaagct
gccacaaacaaagatgtaaaccgaaaactagattctgtaaaacggcaaaaatataacaag
gagcaacagttaaagaagatcaaagcaaagcaaaagcgactccaagcaattcttgctgga
acagggattcttgatgaaattaatgatgttgaaatcgaggatgatgaagaacctgggcca
tcatcaggtccactgcatcttggcagtatgcttatgccagttcaggaaacagagtgggaa
gagcttattcgtactggccagatgactccttttggaactaaaatacctcagaagccaaag
agacagccacggcagttaatgctaaatgaaacatctgattttgagaagtatttagcagat
caagctaagctgtcatctgaaaggaagaagctatcacttctgaaaagagcaaagaagaaa
gcacaagccaaaaatgttcagcgcacatctcccacatccatcacaaaggagaaaaggagt
aaagcgagaactctgtcaaaaacagataagcgcttaaaagaacacatgaacaaacttcag
aagcgtgcccttcagattcagtcaaaagcagggattccaaaagaaaagaaataccttgag
gccaaggagaagctgaggcatgaacagaatgatgatagtggagagtctgagtatgtacct
gatgaggagttttttgatccagaagcagcagaagatgaggaacagcaggcatcttctcat
gctgagaatgattctgattatgaacttaggactttgtcaggaaaaggaaagtatttggtg
aagagagattttaaagaagctgaagatgatgctgacttctttccaagttctgaggaggaa
gaagagcatacagtagggaagcgcaaaataaagagatggagagatgatggagatgaagac
tattataaacagagactaaggaggtggcaaaaagaaggtctgaaggacaaagaacatcac
atggctgaggaactttctgatgaaagtgatactgaatttgaagagggtttcaaagtacca
ggatttctcttcaaaaagctttttaagtaccagcagacaggtgttaggtggctctgggaa
ttgcactgccagcaggcaggaggaattctgggagatgagatgggattgggcaagaccatc
cagataattgccttcctggcaggtctgagctacagcaagatcaggactcgtggttcaaat
tacaggtaccaggggttgggtccaacagtgattgtttgtccagctactgtgatgcatcag
tgggtaaaagaatttcatacttggtggcctccatttagagtcgccattctccatgaaact
ggttcttacaccaacaaaaaggtgaaactaattcgtgaaattgcttcatgccatggaatt
ttaattacgtcctattcatacattcgactgatgcaggataacatccacagctatgattgg
cattatgtgattttggatgagggtcacaaaatccgaaatccaaatgctgcagtcacactt
gcatgcaagcagttccgcacaccccatcgaatcatcttgtctggctccccaatgcaaaat
aacctaaaggagctctggtccctctttgactttgtgttcccagggaaattgggaacactg
cctgtgttcatggagcaattttctgttcccataactatgggaggatattccaatgcctct
cctgtacaggtaaaaactgcatacaaatgtgcatgtgtgttacgagacaccataaacccc
tatttactgcgaagaatgaaggctgatgtaaaaatgagcctttcacttccagataaaaat
gaacaggtcctgttttgtcgtttgacagatgagcagcgtcaagtctatcaaaatttcatc
gactctaaagaagtttaccagattctcaatggagacatgcagattttctcgggactggta
gccctgagaaagatttgcaaccaccctgatctcttctctggtggtcccaggactttgaag
tgcgtaccagatgcagaagtggaggaagcagatcagtttggatattggaaacgttctgga
aaaatgatagtggtagagtccttgctgaaaatctggcacaagcaaggtcatagagtgttg
ttatttactcagtcaagacagatgctgcagatccttgaagtctttgtgagagacagaaac
ttttcctacctcaggatggatggcaccacaacaatagcttccagacagccccttataaca
agatacaatgaggacaaatccatatttatctttcttctgacaactcgtgttggtggcatt
ggagtcaacttgacaggtgctgaccgggttattatttatgatcccgactggaatcctagt
acagacacacaggctcgggagcgtgcttggagaataggccaaaagaaacaggtgactgtg
tacaggcttctcactgcaggtactattgaagagaagatataccacagacaaatcttcaaa
cagtttttaacgaacagagtgctgaaagaccctaagcaaaggcgctttttcaaatccaat
gatctttatgagctttttactctgagcagcccggatgtgtctcaggggacagaaactagt
gcaatttttgcaggtactggttcagatgttcaagtcccaaaacaccagttgaaacggaaa
cttaaaaagccacctgataatgacacttccgaaggtggtctccatcttgcagaaagcagc
tcacgaaagtacagcaagccatccagttcaaccagccacatggcaaattcttcttctaaa
gcaataaagtcaagtgacgaaatgaaaggagatttggaaacctttgaccaaaatagctat
gcaaaagataatgcacaagctactactaatataaattcatggagtaaaagcaaggagaag
agcttggaaagagctgagaagtctgtgtcccagtcattgccagataatgcaggttcttca
gagaatgcagaatgtctgggcaccgtggtaactggtgaagtacatggagcagctaatgta
aatgccgagggaggttttggtcttgcatgtggtgcagctggctcttgggaagagcaggat
gctaaaactgaagatggccaattgaataatcatcattataaatgcacctcaaaaacaaag
cacagggtggatatgctgccacacgagagccacaaagataagtctaagaggaagaaacat
cacaaagatgccaaatttgaaggagagcgtattcctcatctagtaaagcaaaagcagtat
agaaaggaggacagtgaagagaaggagaaagggctaaagaaaaatgatgattatgtcttg
gagaaacttttcaaaaaatcaggggtacacagtgttatgaagcatgatgccattatggaa
gcttccagtgcagattatgtgctggtggaagcagaagcaaaccgagtggcccaggatgcc
ttaagagccttaaaagtctctcgacagcgatgtttaggagctgcttctggtgtgccaacc
tggacaggcacaagtggtctttcaggtgcaccatcaggaataaagagtcggtttggtcag
aaaagaaatcctatgctgctttctccacattctgcttgtgcatcacctggaagcaagtgc
aaggatacaggtacagtaaagaaagaaaatgacaagaggagtaattccaatgggcacttc
gatgggaaatcagagactggagaatcatcatccagcacactagattcttcatctttatta
tcgaagatgagggcaagaaaccaccttactttaccacaaaggacagagagtgagggagat
gagaaccttcagcaagccccagctccagccccaggttcaacagaatacgatgaattgcta
gtggatgtacggaacttcatagcattccaagctcatgtggatggtgaggctagtactcag
gaaatactgcaggaattcgagtccaaactgccagcagcacagtcttgtgtctttcgagaa
ctcctccgcaatctttgcaccttccataggagcccaaatggtgaaggtgtctggagactg
aagccagaattccgctga
DBGET
integrated database retrieval system
