Apteryx rowi (Okarito brown kiwi): 112971515
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Entry
112971515 CDS
T07573
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112971515 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112971515 (TRIM55)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112971515 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-RING_6
Sina_RING
Fry_C
TFA2_Winged_2
COS
Motif
Other DBs
NCBI-GeneID:
112971515
NCBI-ProteinID:
XP_025932826
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MPLEKLGMSTSLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASD
IFQASNPYLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQEST
RPERKCDQPMCEEHEDEKINIYCLNCEMPTCSLCKVFGAHKDCQVAPLTNIYQRQKSELS
DGIAVLVGSNDRVQEIVTQLEETCKVVEECCRRQKEQLCEKFDYLYSVLEERKNEMTQII
TRTQEEKLERVRSLMKKYADHLEAVSKLVESGIQFXEEPEMAVFLQNAKTLLQKITEASS
GFQMEKIEDGYENMNQFTVNLSREEKIIREIDFDREEESEEEEEEMVDGEDLDEVHTESS
GEEEQEEEEEGTERAPLPFQQDPEAPSTVRESPAKPAPPPPPAAPAGQDEVVTPSGSQQT
AESDSPVSSRAETIDSLFYPSWYKAQSRQSSSPSSTSVSGLGKVGPPVSLETRAPKAEAP
EVAAVKESAAGSGKESNTTAAMSKTGSEPSPQGCMEETPLSHERGDEPARHVFSFSWLNS
LNE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggaaaagctaggcatgagcacctctctgaactacaagtccttttccaaagag
cagcaaaccatggataacttggagaaacaactgatttgccctatctgcttagagatgttt
acgaagcctgtggtcatcctgccctgtcagcacaacctgtgcagaaaatgtgccagtgac
attttccaggcctcaaacccatacctgccaaccaggggtggcaccacggtggcttcggga
ggtcgcttccgctgtccttcctgcagacatgaggtggtcctcgaccggcatggtgtgtac
gggctgcagaggaacctcctggtggaaaacatcatcgacatatacaagcaggagtccaca
agacctgaaagaaagtgtgaccagccaatgtgtgaagagcacgaagatgagaaaattaat
atctattgtttgaactgtgaaatgcccacctgctccttgtgcaaagtctttggtgcccat
aaagactgtcaagttgctcctctcacaaacatttaccagagacagaagtctgaactcagt
gatggcatcgcagtcctggtggggagcaacgaccgagtgcaagagatagtcacgcagttg
gaggagacctgcaaggtagttgaggaatgctgcagacgacagaaagagcagctgtgtgaa
aaatttgattatctctattctgtactggaagaaagaaaaaatgagatgacacaaataatc
actagaacccaagaggagaaactggaacgtgtccgctccctgatgaagaagtatgcggat
catttggaagccgtatcaaagctagttgaatcaggaatccagtttayggaagagccagaa
atggctgtgtttttgcagaatgccaaaacattgctacaaaaaattactgaagcatctagc
ggatttcaaatggaaaaaatagaggatggctatgaaaatatgaaccaatttacagtgaac
ctcagtagagaagaaaaaataataagagaaattgactttgacagagaggaggagagcgaa
gaggaagaggaggagatggtggatggtgaagatctggatgaagtacacacagagtcatca
ggagaggaggagcaggaggaggaggaggaaggaaccgagagagcaccactgccatttcag
caggaccccgaagcaccgagcacagtcagggagtctccggccaaaccggcccccccgcca
ccacctgctgcgccggctggccaggatgaggttgtgacaccaagtggctctcagcagact
gcagagtctgacagtccagtgtcatccagagcagaaaccatcgattccttgttttaccct
agctggtacaaggctcagtcacggcaatcaagcagtccaagctcaacctcagtgagtgga
ttgggtaaagtagggcctcctgtttctctggaaacaagggcaccgaaggcagaagccccg
gaggtggcagccgtcaaggaaagtgcagcggggagtggtaaggaaagtaacaccactgca
gcaatgtccaagactggttctgaaccatcccctcaaggatgcatggaggaaacacctctg
agccacgagaggggtgacgagccagctcgtcatgtcttctccttctcctggttgaactcc
ctgaacgaatga
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