Apteryx rowi (Okarito brown kiwi): 112971791
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Entry
112971791 CDS
T07573
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arow04990
]
112971791 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
arow04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
112971791 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
112971791
NCBI-ProteinID:
XP_025933318
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MRKETEDIESPKRSIRDSGYVDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPD
VVLRGSSDGRGSDSETDLPHRRMPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTFY
VPAPLRKKKAEREEYRKSWSTATSPLGDKPFSKTHPETIEEEQNEASGPCEKERVGSMAS
ETSPTKNQVGLNQNKGNSVGQSPSCSAKEASASKGKDAEELRRLRRLEQAGIKVMSAAQR
YGSKKQTCEDNRSTPDIILRKENPFMTLYQGDSGSEDEAASRVPDLEKDDFATRRARMNQ
PKHIVPFSAFLIGPYINKDKGKLEDIKKPLQMEKQEHARGSQVHMASARQIVTHTENPFL
RTKKNESEEEEQVKVPDIERDDLAKRKSQSTLPQLREDIFVNASITQADLETWKRLKLSG
EPSEEDLKCACDSLPSAEIAVKAAVHDDFAVRKARANKKAGSPKQKFVHFGPVTEIDQQK
WDKLSIGRATSRREIKEENKKDDVEIHTGIESSSSTTVGIFQSSGHSEKVSRSQNDSSEV
ARSGTDERCRRTLSPVPAICIVSEKQTQHSLNKWQESIEEECNGQLPDIERDDMLVRRMG
IFQRCTTSPVHIPCPHLSVAPHLLQQQQGEAIAREKDLKTQREAESTVTREESQEQLEIP
HQQSGGIENKVKFPDLQRDDMLARRTGAFLKQTGPSVKQFLPMPFSKQQNKQGTTRELDK
KTERPEKCPQVCINSSGKPAMQSQQEQQQGQERCNIPPAGQDDIISTAQMGDHSLKKVLP
DETSNLQEVPEENKNETLSSKDEHLQIFGPRTAVSDDAESMSMFDMRCEDEAVTQPHSKA
RHEKLQNIHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLSGEGTNERR
KSIKTYREIVEEKERRERELHEAYKNAKSQEEAESILQQYIERFTISEAVLERLQMPKIL
ERSHSVEPDSPLKDPNPLRYLRQQSLPAPKFTATIEATIVPTTELEPSGPTGRTSPSKTV
VSKAVPMLTPKPYSQPKNTQQVLKNFKVDGKVSMNGENVNGVEEKDKECTTVIFTPSPSR
SLKFDGVARGDRPPVELKKDPTSTELSLQRPAIQSVHKEPTASSAEEDTPAGQQVGASPG
SAGPVSLACTSPVSDQKQFKSTADRASPIVTSLELPASPVPLEEAASSEKDVKKPEKEQQ
KEAQLPATQEVMKPKALEPEGSVVFPFLKKLPETSQVTLQNSDLQADSDSGDKSNRFNFW
SWDPEEERKRQERWQHEQERLLQEKYQREQDKLKEEWEKAQKEVEEEERRYYEEERKIIE
DTVVPFIVSSNSAELLSSSSSATEGSKTVNTADSNNSPEEGKQQEVTRQKKLLLEQDSMP
FLKSKENELQQEKNSVNKVLSGHPETGILKGSEQAHQMSVPEHNSSARLSLPLTQDLSWN
QQLLTKQSPQHADDVRQRTSPGQSVGPQSNSAGEKRRAGCHENFRSGPSSPCSPAAPSHS
PNRYKRSVSGKKLCSTCGLPLGKGAAMIIETLGLYFHIQCFRCGICKGQLGDAASGTDVR
IRNGLLNCNDCYIRSRTAGQPTTL
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaaactgaggatattgagagcccaaagcgcagcattcgtgacagcggctat
gtagactgttgggactctgaacgcagcgattctctctccccacctcgccacggcagagat
gactccttcgacagtctggactcgtttggatcccgctcacagcagacaccatccccagat
gtagtgctcagaggaagcagtgatgggagaggaagtgactctgagactgacctgccacac
agaaggatgccagatgtgaaaaaagatgatatgtctgcaaggcggacctcacatggggaa
cctaaatcagctgtgccttttaaccagtacctcccaaacaagagtaatcagactttctat
gtacctgctccgcttcggaaaaagaaagctgagcgagaagagtatcgaaagagttggagc
actgcaacttcaccgctaggagacaaacctttcagcaaaacccaccctgaaaccatagar
gaagaacagaatgaagcatcgggaccatgtgaaaaggagagggtgggctccatggcttct
gagacaagccccactaaaaaccaagtaggtttgaatcaaaacaaaggaaactctgtaggc
cagtctccttcatgtagtgctaaagaagcatcagcatccaaagggaaagatgcagaagag
ctcagaagattaagaagacttgaacaagctggtattaaggtcatgtcagcagcccagcgc
tacggcagtaaaaagcaaacatgtgaagacaatagaagcaccccagacatcatccttcgc
aaggagaaccccttcatgacactttaccaaggggattctggttcagaagatgaagcagcg
agcagagttcctgatttagaaaaggatgattttgccactcggagagccagaatgaatcag
cccaaacacatagttccatttagcgcgtttttaattggaccctatataaataaagataaa
ggtaaactggaagacattaaaaagccattgcagatggaaaaacaggaacatgcaagagga
agccaggtgcacatggcatcagcaaggcaaatagtgacacacacagagaacccatttctg
cgaactaagaagaatgagtcagaggaggaagagcaggtgaaagtgcctgatattgagcga
gatgatctggctaaacggaaatctcaaagtacccttcctcagctacgagaagatatattt
gtgaatgcctctataacacaagcagatctggagacctggaaaagattgaaactgtcgggg
gagcccagtgaagaagatctcaaatgtgcctgtgacagtctgccatcagctgaaatcgca
gtgaaagcagcagtccatgatgattttgctgtccgcaaagcgagagcaaacaaaaaggct
ggtagccccaagcagaagtttgtgcattttggtccagtaactgagattgatcagcagaag
tgggacaagctcagtattggcagagctacatccaggcgtgaaataaaagaggaaaacaag
aaagatgatgtggagattcacactggtattgagagttcttcttcgaccactgttggcatt
ttccaatcttctggacacagtgagaaagtctctaggtcacagaatgattccagtgaggta
gcaaggtcaggtacagatgaacgttgcaggagaacgctatcgcctgtgccggctatttgc
attgtctctgagaagcaaacccaacacagtttgaacaaatggcaagaaagcattgaggaa
gagtgcaatgggcagctacctgacattgagagagatgatatgttggttagaaggatggga
atttttcagagatgtaccactagccccgttcatataccttgtcctcacctgtcagtagct
cctcatctgctgcagcagcagcaaggggaggcaatagctcgtgagaaggatttgaagact
cagcgagaagcagaaagtactgttaccagagaagagagccaagaacagcttgaaatccct
catcagcagagtggtggaatagaaaacaaagtgaaatttccagacctacaaagagatgac
atgttggccaggagaactggagcttttctaaagcagactgggcccagtgttaaacagttc
cttcccatgccattttcaaagcagcagaataagcagggcacaactagagaacttgacaag
aaaactgagaggcctgaaaaatgcccacaagtctgcattaatagctctggaaaacctgca
atgcaatctcagcaagaacagcagcaagggcaggaaagatgcaatatccctcctgcagga
caagatgatattatttctactgcccaaatgggtgatcatagccttaaaaaagtcctcccg
gatgaaacatcaaaccttcaggaggttccagaggaaaataaaaatgaaacattatcatcc
aaggatgaacatctgcaaatattcggccccagaactgctgtgtctgatgacgcagagagc
atgagcatgtttgacatgaggtgtgaagatgaagctgtgacgcagcctcatagcaaagct
cgccatgaaaaactgcagaatatacacaaccaactgaaagaggatgagactagatggcaa
gatgacctagctcggtggaagagtcgccgaaggagtgcttcacaggatttaataaaaaag
gaagctgagagaaagaaaatggaaaggttactgtctggagagggaacaaacgagcgaaga
aaaagcatcaaaacctaccgagaaattgtggaagagaaagagagaagagagcgggagctt
catgaggcgtacaagaacgcaaagtctcaggaggaagctgagagtatccttcagcagtat
attgaaagattcaccattagtgaagctgtccttgagcgtctgcagatgccaaaaattctg
gaaagaagccattcagtggagccagattccccactaaaagacccaaatcctctaagatac
ttaaggcaacaatcgctgcctgctccaaaattcactgccaccattgaagcaaccatcgtt
ccaaccactgaattagagcccagtggtccgacgggccgcacatccccgagcaaaactgtt
gtctccaaggctgtgcctatgctgacacccaagccttactcacaacccaaaaatacacag
caagttttaaagaattttaaggtagatggaaaagtcagcatgaatggagagaatgtcaat
ggagttgaagagaaagataaagagtgcacaacagtaatatttactccttcgccaagcaga
tctctgaaatttgatggagtggccagaggagacaggcccccggtcgagttgaagaaggac
cccacaagtactgagctcagtttacagaggcctgccattcagagtgtgcacaaagagcca
acagcctcttcagcagaagaagatacaccagccggccaacaggttggggccagtcctgga
agtgcaggacctgtgagcctggcgtgcacttccccggtttcagatcaaaagcaattcaag
tcaactgcagatcgtgccagccctattgtgaccagcttagagttacctgctagccctgtc
cctttggaggaagctgcttccagtgagaaagatgtgaagaaacctgaaaaggaacagcag
aaggaagcacagctccctgctacgcaggaggtaatgaaaccaaaagccctggaaccagag
gggagtgtagtattcccatttttaaagaaattacccgagaccagtcaagttactctgcag
aattctgatctgcaagctgattctgatagtggtgacaaatcaaatcgtttcaatttctgg
tcctgggatccagaagaagagcgaaagcgacaggaaaggtggcaacatgagcaagagcgc
ttgcttcaggagaagtaccagagggagcaggacaagctgaaagaggaatgggaaaaggca
caaaaagaagtggaagaagaggaacgtagatactacgaggaggagcgtaagataattgaa
gatacagtggttccattcattgtttcttcaaactctgctgaactcctctcctcctcttcc
tctgccactgaaggaagcaagacagtgaacacagctgattccaacaactctccagaggag
ggcaaacaacaagaagttacaaggcagaaaaaattgcttttggagcaggacagtatgcca
tttctgaaaagcaaagaaaatgaactccagcaagaaaagaatagtgtaaataaagtgctc
tcaggacatccagagacaggtatcttgaaaggaagtgaacaggcgcaccagatgtctgtg
ccggaacacaactcatctgccaggctcagtctaccattaactcaggacctctcgtggaac
cagcagctgctaaccaaacagtccccgcagcatgcagatgatgtgaggcagagaacgtcc
ccgggtcagagcgtgggtcctcagtctaactccgcaggggaaaagaggagggcaggctgt
cacgagaatttccgatctgggccatcatctccctgctctcctgctgctccaagtcactca
cccaacaggtacaaaagatctgtcagcggaaaaaagctttgttctacctgtgggcttcct
cttggaaaaggagctgccatgattattgaaacgcttggtctgtacttccatattcagtgc
ttcaggtgtggcatttgcaagggacagctgggagatgcagcaagtgggacagatgtcagg
attagaaatggtcttttgaattgcaatgattgttacatccgatccagaactgctgggcag
ccaactacrttgtga
DBGET
integrated database retrieval system
