Apteryx rowi (Okarito brown kiwi): 112972017
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Entry
112972017 CDS
T07573
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03022
Basal transcription factors
arow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112972017 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
112972017 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112972017 (ERCC3)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112972017 (ERCC3)
Enzymes [BR:
arow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112972017 (ERCC3)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112972017 (ERCC3)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112972017 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
112972017
NCBI-ProteinID:
XP_025933803
Ensembl:
ENSARWG00000016654
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MPLKADHASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSLY
AAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPDV
IQQLLQDHVIRDCRLRNAEGEETELITETFTSKSAISKSSEGGLGPSTSQGTDAQNKPDV
PADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNP
DINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVL
GNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSXAISTYSMLGHTTKRSWEAE
RVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLI
GPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRAC
QFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKINT
IFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVS
QDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDLDA
EEEVVAGEYGSKSAQVSRRVGTMSSMSGADDTVYMEYHSSRSKASTNKHVHPLFKRFRK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaaggccgaccacgcctcgcggcccctctgggtggctcctgatggccatatc
tttctggaagccttttctccagtttacaaatacgcacaggattttttggttgctattgct
gagccagtgtgcagaccaacacacattcatgaatacaagctgactgcttactcgctttat
gctgctgttagtgttggcttacaaacaagtgacatcacagagtatttacaaaaactgagc
aagactggtgtcccggatggaataattcagtttatcaagttgtgtactgtcagctatggg
aaggtaaagctggtactgaaacataacaggtattttgtggaaagtacccatcctgatgtc
attcagcagcttctgcaagaccatgttattagagactgtcgcctgagaaatgctgagggt
gaagaaacagagctcattacagagacatttacgagtaaatcagcgatttccaaatctagt
gaaggaggcttgggtccatcaacatcacaaggaacagatgctcagaataagccagatgtc
ccagctgatttatttgagttttatgaacagatggacaaagatgaggaggaggaggaagaa
acacagacagtatcttttgaagtcaagcaggagatgattgaagaacttcagaagcgttgt
atccatttggaataccccttgctggcagaatatgatttcagaaatgattcagtgaatcct
gatattaatatagatctgaaacccacagctgttctcagaccctaccaagagaaaagccta
aggaagatgtttggaaatgggcgagctagatctggtgttattgtcttgccatgcggtgct
ggcaagtctctagttggagtgacagctgcgtgtactgtccgcaagcggtgtctggtactt
ggtaattccgcagtgtctgtggagcagtggaaggcccagttcaagatgtggtccaccatc
gatgacagccaaatatgtcggttcacttctgatgccaaagacaaacccattggctgttct
rtcgctattagcacgtactccatgttgggacacacgactaaaagatcctgggaagcagag
agagtaatggaatggcttaaaagtcaagagtggggccttatgattcttgatgaagtccat
actatccctgcaaaaatgttcagacgtgtgctcactatagtacaagctcactgtaagctg
ggactgactgctaccctggtcagagaagatgataaaattgttgacttgaacttcctgatt
ggaccaaagctctatgaagccaactggatggagctgcaaaacagtggctacattgctaaa
gtgcagtgtgctgaggtttggtgcccaatgtcacctgaattttatagagagtacgtagct
atcaaaacaaagaagcggatactgctgtataccatgaacccaaataaattcagagcctgc
cagtttctgattaagtttcatgagcgacggaatgacaaaatcatcgtatttgctgacaay
gtgtttgcactgaaggagtatgcaatcaggcttgggaaaccttacatatatggtcctact
gcacaaggagagagaatgcaaattctacagaacttcaagcacaatccaaaaatcaacact
atttttatttccaaggtaggcgacacatcctttgatctgccggaagccaatgttctgatt
cagatttcgtcccatggtgggtctcgaagacaggaggctcaaaggctgggacgagtgctg
agagccaaaaaaggcatggttgcagaggaatacaatgcctttttctattctcttgtatcc
caagacactcaggaaatggcatattcaaccaagcgacaacgatttcttgtagatcaaggt
tatagcttcaaggtgataacaaagcttgcaggcatggaagaagaagaactttcattttca
tccaaagaagaacagcagcagcttctccagaaagtcctgcaagcatctgacctagatgct
gaggaggaagtagtagctggagaatatggttcaaagtcagctcaggtgtcccgtcgtgtg
ggcacaatgagctctatgtcaggagcagatgatacggtttacatggaataccactcttcc
cggagtaaggcatcaacaaataaacatgtccacccattatttaaacgcttccggaaatga
DBGET
integrated database retrieval system
