Apteryx rowi (Okarito brown kiwi): 112972020
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Entry
112972020 CDS
T07573
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112972020 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arow03400
]
112972020 (XRCC5)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
112972020 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
VWA_2
DUF6005
Motif
Other DBs
NCBI-GeneID:
112972020
NCBI-ProteinID:
XP_025933812
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MARSGGKAAIVLCLDVGFAMGNAAPGEESPLEQAKKVMTKFLQRQVFAESKDEVAVVLFG
TDGTRNDLASGDQYQNITVHRLLMLPDFDLLEDIQNVIQPGSEQADFLDAIIVCMDLLQK
ETIGKKYEKRHIELFTDLSSPVSEDQLEIIIANLKKTGILLQFFLPFPVDADDGGGGTSA
SAHSHVHRNSFARKGITEQQKEGIHVVKKLMHTLDEEGGLEEIYTFRESLERLSMFKKME
RRPVAWPCQLTIGSNLSIRIVAYKSLTEEKVKKTWTVVDAKTLRKDDVQKETVYCLNDDD
ETEIQKDDTIQGFRYGSDIVPFSKVDEEQMKYKTEAKCFSVLGFSRSCQIRRQYYMGNQV
LKVFAAKDDENAAVAFSALIHALAELKVVAIVRYAFDRRCNPQIGVAFPYIKDAYECLIY
VQLPYMEDLRQYMFSSLKNNKKYIPTEDQLSAVDSLIDSMNLVYEDDDGESFEDLFKPSK
IPNPHFQRLYQCLQHKAFYPNEPLPPIEPHLLEMLEMPCVVKERCQAPLEKVKALFPLKD
VGKKKEDKTAQDIFKDNNEDGPNPKKPKAEDEESGFSIISIAEGNVTSVGSVNPTKDFQI
LVRQKNADFREVSQQLTNRIDQFLENKGSQYYMKGINCIKVFREEAIKLSKVQCFNDFLQ
ALKSKVEDKALADFWEIVMQDRISLITKDEAEGSLVTSEEAEKFLAPKEKQNETPPATDE
GGDVDDLVSAIKT
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagcggcggcaaggcagccatagtgctgtgtctggatgtggggtttgcaatg
ggcaatgctgctcctggtgaggagtctccgcttgaacaagccaagaaggttatgacaaag
tttttgcagcgacaggtttttgctgagagtaaagatgaagtcgctgtagttttgtttggc
acagatggtactaggaatgaccttgctagtggggatcaatatcaaaacattacagtacat
agattgctgatgctgccagattttgatttgctggaggatattcaaaatgtgattcaacca
ggctctgagcaagcagactttctggatgcaattattgtatgcatggacttgcttcagaag
gaaacaataggaaagaagtacgagaagagacacattgaactgtttacagaccttagcagt
cctgtcagtgaggatcagctggaaattatcatcgctaatttgaagaaaactggaattttg
cttcaatttttcctgccatttccagtggatgctgatgatggaggtggaggtacaagtgct
agtgcccattctcatgtgcacagaaactcttttgcaagaaaggggataactgagcagcag
aaggaaggcatccatgtggtaaagaaattgatgcatactttggatgaagaaggagggctg
gaagaaatttatactttcagagagagcctggagcgactttcaatgtttaagaaaatggaa
agaagacctgtggcttggccctgccagttaactattggttctaatttgtctataaggatt
gtggcctacaaatctcttacagaagagaaggtgaaaaaaacttggacagtcgtagatgct
aaaaccctcagaaaagacgatgtgcaaaaagaaactgtttactgcttaaatgatgatgac
gagactgaaattcagaaagatgatactattcaagggtttcgctatgggagtgatatagtt
cctttttccaaagtagatgaagagcaaatgaaatacaaaactgaagcaaaatgtttttct
gttttgggattcagcaggtcctgtcagatccggaggcagtactacatgggcaaccaggtt
ctcaaggtctttgcagcaaaagatgatgagaatgcagcagttgctttttctgcccttatc
catgcattggctgagttgaaagtagtggccatagtgcgttatgcttttgatagaagatgt
aacccgcagattggcgtagcctttccgtatattaaggatgcatacgagtgtctcatctat
gtgcaactaccctacatggaagacttaagacagtacatgttttcctccttgaaaaacaac
aaaaaatatattcctacagaggatcagctatctgcrgttgactcgctgattgattctatg
aatttggtttatgaagatgatgatggagaaagttttgaggacctgtttaagcccagcaaa
atcccaaaccctcattttcagagattgtaccagtgcttgcagcataaggctttttacccc
aatgagcctttgccaccaattgaaccgcaccttttagagatgctggagatgccctgtgtg
gtaaaagaaagatgccaggctcctcttgaaaaagtaaaagcactcttccccctaaaggat
gttggcaagaaaaaagaagacaagactgctcaagacatcttcaaagacaacaatgaagat
ggacccaaccctaagaagccaaaagctgaagatgaagaaagtggctttagcatcataagc
attgctgaaggcaatgtcacctctgttggcagtgttaatccaacaaaagacttccaaatt
ctggtgaggcagaaaaatgctgacttcagagaagtgagtcagcagttgacaaaccgcatt
gatcagtttttggagaataaaggttcgcagtactacatgaaaggcatcaattgtatcaaa
gttttcagagaggaggccataaagctgtccaaggtgcagtgctttaatgattttctgcag
gcactgaagtcaaaggtggaagataaagccttagctgatttctgggagatagtgatgcag
gacagaatttctttgatcactaaagatgaagcagaaggaagtttggtgactagtgaagaa
gctgaaaagttcttggccccgaaagaaaagcaaaatgaaactccgcctgccacagacgaa
ggtggtgacgttgatgatttggtgagtgccataaagacatga
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