Apteryx rowi (Okarito brown kiwi): 112972294
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Entry
112972294 CDS
T07573
Symbol
CNGA1
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
112972294 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arow04040
]
112972294 (CNGA1)
Ion channels [BR:
arow04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112972294 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
Presenilin
Zip
Connexin
Ion_trans_2
Tim54
NPR3
Lys-AminoMut_A
Ribosomal_S2
CLN3
SLC52_ribofla_tr
Afi1
RNA_pol_Rpc4
SlyX
Sec62
Motif
Other DBs
NCBI-GeneID:
112972294
NCBI-ProteinID:
XP_025934426
Ensembl:
ENSARWG00000001074
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MKVGVIETHHSHMVVPSVVVEDTSEDPGQMHEGENRFLRQRYLPGTFALYNINNNSNKDE
XKKKKKEKKSKSEEKKEKEKDGEQKNKEKKEKKQNKDKSKNKEKKEEKKKEIFVIDPAGN
VYYNWLFCITMPVMYNWTMIIARACFDELQHDYLTVWFVADYVSDIIYVADMFVRTRTGY
LEQGLLVKEEEKLREKYKTSFQFKLDFLSIIPTDLLYFKVGLSYPELRINRLFRVARMFE
FFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSHPEFA
RLIRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNM
NAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLRYLPDKLRA
EIAINVHLETLKKVRIFADCEAGLLVELVLKLRPQVYSPGDYICRKGDIGREMYIIKEGK
LAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLME
ALTEYPDAKAMLEEKGKQILMKDGLLDIEVANLGSDPKDIEEKISYMERAMDRLQTRFAR
LLAEYDAAQQKLKKRLTQIEKILKPVTEHEFSDLEELDPSTDKPGVSKAE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactcccatatggttgttcccagtgtggtcgtg
gaagacaccagtgaggaccctgggcagatgcatgaaggggaaaacagattccttaggcaa
cggtatctacctggtacatttgcactctacaatattaacaacaatagtaataaagatgag
taaaagaaaaagaaaaaagaaaagaagagcaagtcagaagaaaaaaaggaaaaagaaaag
gatggagaacaaaagaacaaggaaaaaaaggaaaaaaaacaaaacaaagataagtccaag
aacaaagaaaagaaagaggagaagaagaaagaaatttttgttattgatccagcaggaaat
gtgtattacaactggttgttttgcatcacaatgcctgtcatgtacaactggaccatgatt
attgctagagcctgttttgacgaacttcagcatgactacttaacagtatggttcgttgct
gattatgtttctgatatcatctatgttgctgacatgtttgtacggacaagaacaggttac
ctggagcaaggtcttctggtcaaagaagaagaaaaacttagagagaaatacaagacatct
tttcaattcaaattagattttttgtctatcataccaactgatctcttatactttaaggta
ggactgagttacccagaattaagaataaacagattatttagagtagctcgtatgtttgaa
ttcttccagcgaacagaaacaaggacaaactacccaaatatcttcaggatctctaacctt
gtcatgtacattgtgattattattcactggaatgcctgtgtgtactactcaatctccaaa
gctattggatttggggctgacacatgggtctatcccaacacatcccatcctgaatttgcc
cgtctgattagaaagtatgtctatagtctctactggtcaacactgaccctgactactatt
ggtgaaacaccccctcctgtaagggattctgagtatttctttgtagttgttgacttcttg
gttggagtattgatttttgctaccattgttggtaatgtgggttctatgatctccaatatg
aatgctgccagagcagagtttcaagcaaggattgatgctatcaagcagtatatgcacttt
cggaatgtaagtaaagacatggaaaaaagagttataaagtggtttgactatttgtggaca
aataagaaggcagtggatgaaagggaagtcttgaggtatctgccagataaactaagagca
gagattgcaatcaacgttcatctggaaacactgaaaaaagttcggatttttgcagactgt
gaagctgggctgttggttgaacttgtcttgaaactccggccacaagtatatagtcctgga
gattatatttgccgaaagggagatattggacgagagatgtacattatcaaagaaggcaaa
cttgcagtagttgctgatgatggaattacgcaatttgtggtcttaagtgatggtagctac
tttggagagattagcattcttaatatcaaaggtagcaaagctggcaaccgaagaacagcc
aatattagaagtattggttactcggacttgttttgtctatctaaagatgatctcatggag
gctttaacagagtatccagatgcaaaggctatgctggaagagaaaggaaagcaaatctta
atgaaagatggactgctggacattgaagttgcaaatttaggaagtgatcctaaagatata
gaagaaaagatcagttacatggaaagagcaatggacagattacaaacaaggtttgccagg
ttgttggccgagtatgatgctgcacaacagaaactgaaaaaaagacttacacaaattgag
aaaatattgaagccagttacagagcatgaattctcagacttagaagaattagatccatcc
acagacaaacctggagtgtcaaaagcagaataa
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integrated database retrieval system
