Apteryx rowi (Okarito brown kiwi): 112972399
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Entry
112972399 CDS
T07573
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein isoform X1
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arow04131
]
112972399 (HPS5)
Membrane trafficking [BR:
arow04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
112972399 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_2nd
Beta-prop_WDR3_1st
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
112972399
NCBI-ProteinID:
XP_025934645
Ensembl:
ENSARWG00000009973
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MASVQMIPDSYNHVLAEFECLDPLLSALRLDSSRLKCTCIAVSRRWLALGTSGGGLNLIQ
KEGWKQRLFLTHKEGAISQVACCLHDEDYVAVATSQGLVVVWELNQERRGKPERIYVSSE
HKGRKVTALCWDTAALRVFVGDHVGKVSAIKINTSKQGKAAATFVMFPVQIITTVDSRVV
QLDYLDGRLLISSLTRTYLCDTEREKFWKIGNKERDGEFGACFFPVGKNSGNQQPLIYCA
RPGSRMWEVNFEGEVQSTHQFKQLLSSPPLPVVTLGMDPHYTGTSCSAQSLPFPKLLYLT
EHCVMTWTERGIYIFVPQSVQVLLWSEVKDIQDIAVYKNELFCLHTNGKVIHLSLLLVDR
CIERLMRRGFWTLAARVCCLFQNSIISCRARKNLPLDRLEHLKSQLDISTQQELVAQLEE
LISKLEPPDSACSSRRSSISSHESFSVLDSGIYRVVSRRGSQSDEDSCSLHSQTFSEDER
FKEFPVHQEDEQVEPDNVSHASVTVEADRNETFLPFSIPLSFRSPSPLVSLQAVKESVSS
FVRKTTEKIGTLHVSPDIRGRQEAKDDEQLQEVTVNVAAFPQEKKESEPQSCPLPEEDHL
RDLKAATAEAIAKLQDPLVLLEPQYMRRVLQEWLFYLEEKFGSKECSASSVKKSKIVCAE
EQREVLEENLQLDPNGEGHADKEQSGILEACTVKENTVETCEGKTVCENSANSMGPLDCC
FQVSPPCVIEQDVQKDLTELTTLCFELCVFCCGNGNAEESSDQTPTPAASWTLACRFIQS
YFFLLDLKRLKQCIITSYTNSPNVWETYIAGLKELTCHSPVVLAMENEDMLKILKQLHDL
GPWDDSPLLLVHVQRLYEKFGETALRPLIKFHPSILPSDIRQLCRNDPAHFLAYLDSLVK
SKPEDKRSCLLRSLLQPESLRLDWLCLAVSHDAPQRTNTVDAEGNPRPRSHLFTWGYSQL
ILLLIKLPADFVTKEKMADICKSYGFWPGYLFLCLELDRRTEAFTNIGHLDDLSLLNGEA
GLIPETTEEWKFLLHLAENHNAASHHHSIHNGNAVSNGSPSWENCITVENISLLLAKAIG
PNRALPLLQECGFSLELSERFTSVCEILRIAEKRQRALIQSMLERCDRFLWSQQA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtgcaaatgattccagactcttacaaccatgtgttggcagagtttgaatgt
ttggatccattgctttctgcactcaggctggattctagtcgtctgaagtgcacgtgcata
gctgtgtccaggagatggctggctctaggcacttcaggaggaggactgaaccttatacag
aaagaaggttggaagcagagactctttttgacccataaggaaggtgccatttcccaggtt
gcctgttgtttacatgatgaagactatgttgctgtagccaccagccaaggtcttgtagtt
gtctgggagttgaatcaggaacgtcgtgggaagccagaaaggatttacgtttcctctgag
cataagggcagaaaagtcacagctctgtgttgggatacagctgcccttcgggtttttgta
ggagatcatgtgggaaaagtatcagccatcaagattaacacatcgaaacaaggcaaggct
gctgccacttttgtgatgtttcctgttcagattataaccaccgtagactctcgggtagtt
cagcttgattatttggatggaagactgctcatatcttcacttacacgtacttatttgtgc
gatactgagagagagaagttctggaaaattggtaacaaagaaagagatggagaatttgga
gcctgtttcttcccggttggaaagaacagtgggaatcagcagccattaatatattgtgcc
cggcctggctcaaggatgtgggaggtgaactttgaaggggaagtgcaaagcacgcatcag
ttcaagcagctgctctcatcaccgcctctccctgttgttactctcgggatggatcctcat
tatactggtaccagctgttctgcacaatctttacctttccccaagctcctatatttgact
gagcactgtgtaatgacctggacagaaagaggcatttatatctttgttccccaaagtgtg
caagtcttactctggagcgaagtaaaagatattcaggatattgcagtttacaaaaacgaa
ctgttctgtctgcatacaaatggaaaagtcatacacctctcccttctgctggtagaccgt
tgcatagagcgtctgatgagaagagggttctggacccttgctgccagggtctgttgtctc
ttccagaactcgattatttcttgcagagcaagaaaaaatttgcctctagacaggctggag
cacttgaagtcccagctggatatctcaacccaacaggagcttgttgcccaactggaagaa
ctgatttcaaagttggaacctccagattctgcatgcagcagtaggaggagcagtatttca
tctcatgaaagcttcagtgtcttagactctggaatatatcgtgttgttagtcgaagaggc
agtcagtcagatgaagattcatgttctctccacagtcaaacattttcagaagatgagaga
tttaaagaatttcctgtacaccaggaagatgagcaggtggaacctgacaatgtatctcat
gcatctgtgaccgttgaggctgatcggaatgagacatttctcccattcagtattcctttg
tcatttcgttccccatctcctctcgtctctctccaagctgtcaaggaaagtgtttccagc
tttgtacgcaaaactactgaaaagattggcacccttcatgtgagccctgatattagaggg
aggcaagaagcaaaggatgacgagcagctgcaggaggtgactgttaatgtagcagcattt
ccccaggaaaagaaagaatcagaaccacagagctgcccgcttccagaagaggaccatcta
agagatctcaaggctgcgacagcagaagctatagccaaactccaggatccactggttttg
ttagaaccacagtatatgagaagggttttacaggaatggcttttttatctggaagaaaag
tttggcagcaaggagtgttctgcttcatctgttaagaaaagcaagattgtgtgcgctgaa
gaacagcgggaagtcctggaggaaaacctgcaactggatccaaatggtgaaggccatgca
gacaaagaacagagtggtatcttggaagcctgcactgtaaaagaaaatactgttgaaacc
tgtgaaggcaaaactgtgtgtgaaaatagcgctaattcaatgggacctttggactgctgc
tttcaagtgtctcctccatgtgtcatagaacaggatgttcagaaagatctcactgagttg
acaacactgtgttttgagctctgtgtgttttgttgcggaaatggtaatgctgaggaaagt
tctgatcaaactccaacgccagcagcttcatggaccttggcttgtaggtttatacaaagc
tacttctttcttctggatttgaaaagactaaagcagtgtattataaccagttacacaaac
agtcctaatgtatgggaaacatacattgcaggtttgaaagaattaacttgtcacagtcca
gtagttttggcaatggaaaatgaagatatgttgaaaatactgaaacagttgcatgatttg
gggccttgggatgatagccctctgttactggtgcatgttcaaaggctttatgaaaagttt
ggggaaacagctcttcggcccttgatcaagttccacccctctattttgccttcagatatc
aggcaactttgcaggaatgacccagctcactttttagcatatttagatagtcttgtgaaa
tccaagccagaggataaaaggtcatgtctccttagatctcttttgcagcctgaatcatta
cgactagattggctgtgcttggcagtttctcatgatgcaccacaaagaacaaatactgtg
gatgcagaaggaaatcccaggccacgatcacatttgtttacttggggctacagtcagcta
attctgcttttgattaaacttccagctgactttgtaacaaaagagaagatggctgacatc
tgtaaatcatatggattctggcctggatatctttttctttgtctggagctggatagaaga
acagaagcctttactaatattggtcatttggatgatttgagcctgttgaatggagaagct
ggtttgattccagagaccacagaagaatggaagtttcttctgcatcttgcagaaaatcac
aatgctgcttcccaccatcacagcatacataatgggaatgctgtcagcaatggtagccct
agctgggaaaactgcatcactgtggaaaacatctctctcttattggcaaaggcaattggc
ccaaatcgtgccttgcctctattgcaggagtgtggcttctccctagaattgtctgagaga
tttactagtgtgtgtgagatactgcgaattgctgagaaaaggcaaagagccctgattcag
tccatgttggaaaggtgtgaccggttcttgtggtctcagcaagcatag
DBGET
integrated database retrieval system
