Apteryx rowi (Okarito brown kiwi): 112972400
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Entry
112972400 CDS
T07573
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03022
Basal transcription factors
arow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112972400 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
112972400 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112972400 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112972400 (GTF2H1)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112972400 (GTF2H1)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112972400 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
112972400
NCBI-ProteinID:
XP_025934650
Ensembl:
ENSARWG00000010098
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAADNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLAKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaagaagtgttactgatcgtaaagaaggtacgtcaaaagaagcag
gatggggcgctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtatgcagacatcaaatgccagaaaatcagtcctgaaggtaaa
gctaaaattcagcttcagctagtattgcatgcaggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggaacgagatgcggtaaaggatcttcttcaacagctgttg
cccaaattcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttgagcctgaatgcagcagataattctgcagcacctagtaag
caggatgtgggcatctctgcagcgtttctggctgatgtgcggcctcaaacagatggctgc
aatggtctgaggtacaatttaacttcagatatcattgaatccatatttcgaacatatcct
gcagtaaaaatgaaatacgcagaaaacgttccacataacatgacagagagggaattctgg
acacgattttttcagtctcattacttccatcgggacaggcttaatacaggctcaaaagac
ctctttgcggagtgtgccaaactggatgaaaaaggtttaaaaacaatggtgtctcaagga
gtaaaaaaccctctgatagatttaacagctttagaagataaaacattagatgaaggctat
ggtgttgcttctgtagcctctacatcaaatgcctcaaaatctgctagagaaagtagcaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcaga
aaacaagaagcacaaaatgaccattacagcgagaccagcagtacggatggaaactccagg
gattcagatttctttcaaccaccaatgaaaaaggtgaaactgcaggagtccattgaatat
gaagatttagcaaagaataatagcattaaaactattgcactaaacttaaagaaatctgat
cggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcttttcatagtattaggcaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctaaaacacttgtatgtggcagtaggggaactgctacgacacttctggtcctgctttcct
gttaacacgccattcctagaagaaaaggttgtgaaaatgaggagtaacctggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaac
ttgataagtcatatagaagagatgctgcagacagcctacaacaagttccatacatggcag
tcccggcgtatgctgaagaagacgtga
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