Apteryx rowi (Okarito brown kiwi): 112972608
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Entry
112972608 CDS
T07573
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112972608 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112972608 (CPSF2)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112972608 (CPSF2)
U7-dependent histone pre-mRNA processing factors
112972608 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
112972608
NCBI-ProteinID:
XP_025935120
Ensembl:
ENSARWG00000017381
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MVLPVTPHFASSFLSPPLSRWRRERRPDEVVGARPAGLGRGPWSRIVLLEIKHLERKMTS
IIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLLSHP
DPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAF
DKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIH
LNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRV
LELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPF
QFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTTPGT
LARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDES
DAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPE
DFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISATESMEIKARVTYIDYEGR
SDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYVPKLHETVDATSET
HIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLEIQV
DMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPRLSD
FKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcccgtcaccccgcactttgcctcctccttcctctccccgcccctctcaaga
tggcggagggagcggcgtccggatgaggtggtgggcgcgcggcccgctgggctcgggcga
ggcccgtggagcagaatagttcttctggagatcaaacatctggagagaaaaatgacatcg
attatcaagttaaccacgctttcaggggtgcaggaggaatctgccttgtgctatctattg
caagtagatgaatttcggtttctgttggactgtggctgggatgaaaacttttctatggat
attattgattcgctaagaaaacatgtacaccaggttgatgctgttcttctttctcatcct
gaccctctacatcttggtgcgcttccgtatgcagttggaaaaatgggcttaaactgcgcc
atttatgcaactattcctgtatataaaatgggacagatgtttatgtatgatctctatcag
tcccgccataatacagaagacttcactctctttacgttggatgatgtagatgcagccttt
gacaaaatacaacagctgaagttttctcagattgtgaacttgaaaggcaaaggacatggt
ctgtcaatcacaccattgccagctggtcacatgataggaggcacaatctggaagatcgtc
aaagatggagaggaagaaattgtttatgcagttgatttcaaccacaagagggagatccat
ctgaatggatgttccttggaaatgttgagcaggccttcgttgcttattacagattcgttt
aatgccacttacgtacagcctaggaggaagcaaagggatgaacagctgctgactaatgtt
ttggagacattacgaggtgatggaaatgtattaatagctgtggatacagcaggcagagtt
ctggaacttgctcagcttcttgatcagatatggagaacgaaagatgcaggattaggagtc
tactcactagcacttctgaataacgtcagctacaatgtagtggaattctctaaatcacag
gttgaatggatgagtgacaaactgatgaggtgctttgaagacaagagaaacaatcctttt
cagttccgccacctctccttatgtcatagtctgtctgatttggctcgagtgcctagtcca
aaagttgttcttgctagtcaacctgatttagagtgtgggttttctagagatctcttcatt
cagtggtgccaggattcaaaaaactctataattttaacgtaccgcactacacccggaaca
ttagcacggttcctgattgataatccttctgaaaaagttatagatattgagttgagaaaa
cgtgtcaagttggaaggaaaagaacttgaagagtacctagaaaaggagaagctaaagaaa
gaagcagctaagaagttggaacagtctaaggaggcagatattgattccagtgatgagagy
gatgctgaagaggatattgatcagccaactgtacataagaccaaacatgatttgatgatg
aaaggtgaaggtagccgaaaaggaagcttcttcaaacaggcaaagaagtcttatcccatg
tttccagctcctgaggaaagaattaaatgggacgaatatggagagattatcaaacctgag
gattttctggttccagaacttcaagcaacagaagaagaaaaaagtaaattagaatctggt
ttaacaaatggagatgaacctatggaccaggatttatcagatgttcctaccaaatgtatt
tcagcaacagaatccatggaaattaaagctagagttacatatattgactatgaaggacgt
tcagatggtgactcaattaaaaaaatcattaaccaaatgaaaccaagacagctgatcatt
gtccatggaccgcctgaggccagtcaggaccttgcagaatgttgcagagcttttggcgga
aaagatattaaagtttacgtgcccaaactacatgaaactgtagatgcaaccagtgaaact
cacatctaccaggtcaggttaaaagattctcttgtcagctcccttcagttctgtaaagcc
aaagatgctgagttggcttggatagatggtgttctggacatgcgagtttcaaaagtggac
actggagttattttggaagagggggagctgagggaagatgaagacttagagatacaagtg
gatatgccttcttcagactccagtgtcattgcacaacaaaaggccatgaaaagcctgttt
ggtgatgatgataaggaaatgtgtgaggagagtgagatcattcctactttggaacctctg
ccacctcatgaggttcttggacatcagtctgtgtttatgaatgagccaagactgtctgac
ttcaagcaagttcttctgcgggaaggtattcaagcagaatttgtaggaggagtgcttgtg
tgcaacaacctggtggctgttcgcaggactgaaacaggacgcattggattggaaggctgt
ctctgtcaggacttctatagaataagagaccttttatatgagcaatatgctattgtctaa
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