Apteryx rowi (Okarito brown kiwi): 112973292
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Entry
112973292 CDS
T07573
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112973292 (CTCF)
03036 Chromosome and associated proteins [BR:
arow03036
]
112973292 (CTCF)
Transcription factors [BR:
arow03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112973292 (CTCF)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112973292 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
112973292
NCBI-ProteinID:
XP_025936749
Ensembl:
ENSARWG00000000274
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSFRNTNQEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGGEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GPDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
VEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcttcaggaacacaaatcaggaa
ggtgaaatggaaggcgaggcagttgaagctattgtggaagaatcagaaacttttattaag
ggaaaagagagaaaaacctatcaaagacgccgtgaaggtgggcaggaggacgatgcttgt
catataccaccaaaccaagcagatgggggtgaagtagttcaggatgtcaacagtggtgtg
cagatggtgatgatggaacagctggatccaacacttcttcaaatgaagactgaagtaatg
gaaggtgcagtgccccaagaaacagaggctacagtggatgatacgcagatcataacactt
caggttgttaatatggaagagcagcctataaatcttggtgagcttcagctggtccaagta
cctgttccagtgactgtacctgttgccaccacttctgtggaagaacttcagggagcgtat
gaaaatgaggtttccaaaggaggcctgcaagagggagagcccatgatctgtcacactctc
cctttaccagaaggcttccaggtagtgaaagtgggtgcaaatggtgaggtggagacgctg
gaacaaggtgaacttcagccccaagaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagctccgctacactgaggaaggc
aaagatgtggatgtctctgtgtatgactttgaagaggagcagcaggagggtttgttgtct
gaggtcaatgcagaaaaggtagtgggcaacatgaagccacctaaaccaacaaaaatcaaa
aagaaaggtgtaaagaagacattccagtgcgagctgtgcagttacacttgtccacgtcgt
tctaacttggaccgccacatgaaaagccacactgatgaaagaccacataagtgccatctc
tgtggcagggcttttcggacagtcacattactgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgttacaaacacacccatgagaaaccattcaaatgttcaatgtgtgattat
gctagtgtggaggttagcaaattgaaacgccacattcgctctcacactggagagcgtccg
ttccagtgcagcttgtgcagctatgccagcagggatacttacaaactgaagaggcacatg
aggacccactctggagagaagccatatgaatgttatatctgccatgctcgcttcactcag
agtggtaccatgaagatgcacattttacaaaagcatacggagaatgtggccaaatttcac
tgtcctcactgtgatactgttatagcaagaaagagtgacttgggtgtccatttgcgaaag
cagcattcctacattgagcagggcaagaagtgtcgctactgtgatgctgtgtttcatgag
cgatatgccctcatacagcatcaaaaatctcacaagaacgagaagcgcttcaagtgtgac
cagtgcgattatgcgtgcaggcaggagcggcacatgatcatgcataaacggacccatact
ggagaaaagccttatgcttgtagccattgtgataaaaccttccgtcaaaaacagctcctt
gatatgcacttcaaacgataccacgatcccaactttgtccctgccgcatttgtctgttcc
aagtgcggtaaaacattcactcgcaggaacacaatggccagacatgctgataactgttct
ggcccagatggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggcaga
aagagaaagatgcgctctaagaaagaagattcctctgatagtgaggaaaatgctgaacca
gatttggatgataatgaagatgaagaggagacagcagtagaaattgaggctgaaccagaa
gtcgagcaagaggctcctgcaccacctcctagtaagaaacgaagaggaagaccaccaggc
aaagctgccactcaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaatattatagttgaagtaaagaaagaacctgatgcagaaaca
gtagaggaagaggaagaagctcagcctgctgtagtggaagctcccaatggagacctcact
cctgagatgattctcagcatgatggaccggtga
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integrated database retrieval system
