Apteryx rowi (Okarito brown kiwi): 112973438
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Entry
112973438 CDS
T07573
Symbol
SOX17
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112973438 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112973438 (SOX17)
Transcription factors [BR:
arow03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112973438 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
112973438
NCBI-ProteinID:
XP_025937121
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSSPDAGYASSDDQAQGRCSLPIMMPAMGPCPWAESLSPLGEAKAKSEAAPSGAAGGRSK
SESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAAPGLGSEGSGGGRMCVESL
GLPYAEQGYAAGPGALPPGAGHYRDCPPLGAAFDGYSLPTPDPSPLDAAESEAPFFAAGL
QEECALVPYSYPPHPAAEYAPAAAEGAAGXXXXXXXXXXXLGCQAPLHAYYGQMCQPPGP
GRPLPPPPAGGQPSPPPEATQCREQLEHLPQDELLGEVDRTEFEQYLHFACKPELGLPFA
GHDAAGLPAPEGAGPVSAAVSDASSAVYYCGYPDV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctatgccagcagcgacgaccaagcgcaggggcggtgctcg
ctgcccatcatgatgccggccatgggcccctgcccctgggcagagtcgctgagccccctg
ggcgaggcgaaggcgaagagcgaggcggcgccgtcgggggcggcgggcggccggagcaag
agcgagtcgcggatccgccggcccatgaacgccttcatggtgtgggcgaaggacgagcgc
aagcggctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggt
aaatcgtggaaggcgctgtcgctggcggagaagcggccgttcgtggaggaggcggagcgg
ctgcgggtgcagcatatgcaggaccaccccaactacaagtaccggccgcggcggcggaag
caggtgaagcgcctgaagcgcgtggagagcggcttcctgcagcacggcctggcggaggcg
gcggcgcccgggctgggcagcgagggcagcggcggcggcaggatgtgcgtggagagcctg
ggcctgccctacgccgagcagggctacgcggcggggccgggcgcgctgccgccgggcgcg
ggccactaccgggactgcccgccgctgggcgccgccttcgacggctacagcctgccgacg
ccggacccgtcgccgctggacgcggcggagagcgaggcgcccttcttcgcggcggggctg
caggaggagtgcgcgctggtgccctacagctacccgccgcacccggcggccgagtacgcg
ccggcggcggccgagggcgcggcgggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnng
ctgggctgccaggcgccgctgcacgcctactacgggcagatgtgccagccgccgggcccg
gggcgcccgctgcccccgccgccggcgggcgggcagccgtcgccgccgcccgaggcgacg
cagtgccgggagcagctggagcacttgccgcaggacgagctgctgggcgaggtggaccgc
accgagttcgagcagtacctgcacttcgcctgcaagcccgagctggggctgcccttcgcg
ggccacgacgcggcggggctgccggcgcccgagggcgcggggcccgtgtcggcggcggtg
tcggacgccagcagcgccgtctactactgcggctaccccgacgtgtga
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