Apteryx rowi (Okarito brown kiwi): 112973599
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Entry
112973599 CDS
T07573
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112973599 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arow03041
]
112973599 (SF3B1)
03036 Chromosome and associated proteins [BR:
arow03036
]
112973599 (SF3B1)
Spliceosome [BR:
arow03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
112973599 (SF3B1)
Complex B
112973599 (SF3B1)
Complex C
U2 SnRNP specific factors
112973599 (SF3B1)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112973599 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
112973599
NCBI-ProteinID:
XP_025937442
Ensembl:
ENSARWG00000011582
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGASSQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacaaattcgagaaattcaagga
aaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattatgat
caagaaatttatggtggcagtgacagcaggtttgctggatatgtaacttctattgcagca
actgaattagaagatgatgatgatgactactcttctacaagtttgcttggccagaagaag
ccagggtaccatgctccggtggcattgcttaatgacataccacagtcgactgaacagtat
gatccctttgcagaacaccgtcctcaaaagattgcagatcgggaggatgaatacaaaaag
cacaggcggatgatgataatttcccctgagcgccttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acaaaagaagagagggaaattaggcaacagctagcagaaaaagctaaagctggagagctt
aaagtcgtcaatggagcctcatctcaaccaccttcaaaacgcaaacggcgttgggatcag
acagctgatcagactcctggtgctactcctaaaaaactatccagttgggatcaagcagag
actcctggacatactccctctctgcgatgggatgaaactccaggccgtgcaaagggcagt
gaaactcctggtgccaccccaggctcaaaaatatgggatcctactcccagtcatacacca
gcaggagctgcaacacctggacgggacacacctggtcatgccacaccaggccatggaggt
gccacatccagtgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatact
ccgggacatggcagtggatgggctgagactcctcgtacagatcgcggtggtgattcaatt
ggcgagacaccaaccccaggagcaagtaaaagaaagtcacgatgggatgaaacacctgcc
agccagatgggtggcagcactcctgttctgacacctggcaaaacacccattggtacccca
gctatgaacatggcaactcctacaccaggtcatataatgagcatgactcctgaacagctg
caagcttggcgttgggagagggaaatagatgagagaaacagaccgctttctgatgaagaa
ttggatgccatgttcccagaaggatataaggttcttcccccaccagctggttatgtacca
attcgcactccagctcgcaaacttacagccactccgacgcctttgggtggtatgactgga
ttccacatgcagacagaagacaggactatgaagagtgtcaatgatcagccctctggaaat
cttccattcctaaaaccagatgatatccaatactttgataagctgctggttgatgttgat
gaatcaacactgagtcccgaagaacagaaggagagaaaaataatgaagttacttttgaag
ataaagaatggcacacctcccatgagaaaggctgcgttgagacaaattactgataaagct
cgggaatttggagcagggccactgttcaatcagattctacctctgctgatgtcaccgacg
cttgaagatcaagaacgtcacttgcttgtcaaagtcatcgatagaattctctacaaactg
gatgacttggtccgaccatatgtacacaagattcttgtcgtcattgaaccactgctgatt
gatgaagactactatgccagagtggaaggcagagaaattatttcaaacttggctaaggct
gctggtttggcaacaatgatctccacaatgcgacctgatattgataatatggatgaatat
gtccgaaataccacggctcgagcctttgctgttgttgcctctgctttgggcattccttct
ctgttacccttcttgaaagctgtctgtaaaagcaaaaaatcctggcaggctaggcatact
ggcatcaagattgtacagcaaattgccattcttatgggttgtgctatcttgcctcatctc
aggagcttggttgaaattattgaacatggtctggtggatgagcagcagaaagttcgtacc
atcagtgctttggctattgctgctttggctgaagcagctactccctacggtatcgagtca
tttgattctgttctaaagcctttatggaaaggtatacgtcaacacagaggaaagggtttg
gctgcctttttgaaggctattggttatctgattccattgatggatgctgagtatgcaaac
tattataccagagaagtcatgctaatccttatcagagagttccagtctcctgatgaagag
atgaaaaagattgtattgaaggtggtaaagcagtgttgtggtacagatggtgttgaagca
aactacattaaaacagagatcttgccaccatttttcaaacacttctggcagcacagaatg
gcattggacaggagaaactacagacagttggttgatacaacagtggagctggcaaataaa
gttggagcagcagaaattatttctagaattgtggatgatctgaaggatgaggcagagcag
tacagaaaaatggtcatggaaacaattgagaagataatgggaaatctaggggcagcagac
attgatcataagctggaagaacagcttattgatggtatcttgtatgccttccaggaacag
accacagaggattctgtgatgctgaatggctttggcacagtggtcaatgctctaggcaaa
agagttaaaccctatttgccacaaatctgtggtacggttttgtggcgtttgaacaacaaa
tcggctaaagttaggcagcaggctgctgacctgatctctcgcactgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggacacttgggtgttgtgttgtatgagtacctgggt
gaagaatatcctgaagtactgggcagcatactcggagcacttaaggccattgtgaatgtt
ataggtatgcacaagatgacaccaccaatcaaagacctcctgccacggcttacacctatt
ttgaagaacagacatgagaaagtacaggagaattgtattgatcttgttgggcgtattgca
gacaggggtgcagaatatgtttctgcaagagaatggatgaggatctgctttgaactgctt
gaattattaaaagctcacaagaaagctatccgaagagccacagtaaacacttttggttat
atcgcaaaagctattggacctcatgatgtactggctacactgctaaataacctgaaagta
caggaaaggcagaacagagtatgtactacagtggcaattgctattgtagctgaaacgtgc
tcacctttcacagtgctgcctgcgctcatgaatgaatacagagttccagaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgtttgagtacattggagagatgggaaaa
gattacatttatgctgttacaccattgcttgaggatgctttaatggacagagatctcgta
cacagacaaacagcaagtgctgtggtgcaacatatgtctcttggtgtctatggatttggc
tgtgaagattctcttaatcatttgttaaattacgtatggcctaatgtgtttgaaacctct
cctcacgtcattcaggcagtcatgggggctctggagggcctcagagttgctatcggtccc
tgcagaatgttgcagtattgtttacagggtttgtttcaccctgcccgcaaagtcagagat
gtttattggaagatttataattcaatctatatcggctcacaggacgctctgatagcgcat
tatccaagaatctataatgatgaaaagaacacctacattcgttatgaacttgactacatc
ttataa
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integrated database retrieval system
