Apteryx rowi (Okarito brown kiwi): 112973797
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Entry
112973797 CDS
T07573
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03020
RNA polymerase
arow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112973797 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
112973797 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112973797 (POLR2B)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112973797 (POLR2B)
Enzymes [BR:
arow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112973797 (POLR2B)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112973797 (POLR2B)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112973797 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
112973797
NCBI-ProteinID:
XP_025937887
Ensembl:
ENSARWG00000015126
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaggatgatgatgaaatcactcccgac
ctgtggcaagaagcgtgctggattgttattagctcctactttgatgagaaaggtctggtc
aggcaacagctggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gacgctccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagag
ccaccccggtatctgctgaagtttgaacaaatctatctctccaaaccaacgcattgggaa
agagatggcgcaccgtcccccatgatgcccaacgaagccaggctgagaaacctcacgtat
tcagcccctctgtacgtggatataactaaaacagtcattaaagagggggaagaccagtta
cagacacagcatcagaaaacttttataggaaaaatccctattatgttacgttcaacatac
tgcttgttgaatggcttaactgaccgtgatctttgcgaactgaatgaatgccctcttgac
cctggyggctactttatcattaatggatcagaaaaggttctgatcgctcaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggagaattcctctcgaccaaccagtactatatgggttagcatgctg
gccagaggcgggcagggtgcaaagaagagtgctattggccagcgcattgtggcaactttg
ccgtatatcaaacaggaagtgcccatcataattgtctttcgtgcgctaggctttgtgtcc
gacagggatattttagagcacatcatttatgattttgaagatccagaaatgatggaaatg
gtcaaaccttctttggatgaagcatttgtcatccaggaacaaaatgtcgctctgaacttc
attggatcaagaggtgcaaagccaggtgtcaccaaagagaaaagaatcaagtatgctaaa
gaagtcttgcagaaagaaatgctcccacatgttggtgtcagcgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagattgttgctggcagcactgggaagaaga
gagcttgatgacagagatcattatggcaacaaaagactggatcttgctgggccactgtta
gctttcctgttcagaggaatgtttaaaaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaagatttcaacttggaactggcaattaaaacaagaattatt
tcagatggattgaagtattcattggcgactggaaactggggcgatcagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgtctgacttttgcatctacgctgtcc
catctgaggcgcctgaattctccaattggtagagacggtaaactagcaaagcccagacag
ctgcacaatacgctgtggggcatggtttgccctgctgagactccagagggtcatgcagta
gggcttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaagagtggagtatggaaaatctggaagaaatatctccagcagca
atagctgatgctaccaagatttttgttaatggctgctgggtaggaatacacaaagatccg
gaacaacttatgaatacgctaagaaagctgcgtcgtcagatggacatcattgtgtcggag
gtctcaatgattagggatatccgggagcgagaaatccgcatctatacggatgcaggcaga
atttgtcgaccccttttaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggagcgagagtataacaattacagctggcaggatcttgtggccagtggt
gtagtggagtatattgataccctggaagaagagactgtgatgctggcgatgactccggat
gacttgcaagagaaaggtgtcgcgtattgttcaacgtacacacactgtgagattcaccca
tctatgatcctgggagtatgtgcatctatcatccctttccctgatcacaaccagtctcct
aggaacacataccaatctgctatgggtaaacaggctatgggagtttacattacgaacttc
catgttcgtatggatacgctggcccatgtgctgtattatcctcagaagccccttgtaaca
actcgttctatggagtacttgcgatttcgagagttaccagcaggtatcaactcgattgta
gccattgcatcgtacacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gtggatagaggctttttcagatctgtgttctatcgctcatacaaagagcaagagtccaaa
aaagggtatgaccaagaggaagtttttgaaaagcctacccgtgaaacttgccaaggcatg
agacatgctatctatgacaaacttgatgatgatggtttgatagcacctggggtacgtgtg
tccggggaygatgtcattattggcaaaacagtaactctgccagaaaatgaagatgaactg
gaaagcaccaacagacgtttcacaaagagagactgcagcacttttctgcgaactagtgag
actggtattgtagatcaggtcatggtaacccttaaccaggaaggatacaagttctgcaaa
attcgggtacgctctgtgagaatcccacaaattggagataaatttgccagcagacatggt
cagaagggaacctgtggaatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacacctgatataatcatcaatccccatgccatcccttcccgcatgaccattggtcac
ttgatcgaatgtcttcaggggaaggtatcggcaaacaagggagaaattggtgatgctaca
ccttttaatgatgctgtcaacgtgcagaagatttccaacctcttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggattcactggccgaaaaatcacatcrcag
attttcatcggtcctacttattatcagcgattgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatccttaacagacagcccatggaaggtagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagatcgctcatggagcagcc
cagttcttgagagagaggttgtttgaagcttcagacccataccaagtccatgtctgtaac
ctctgtggaatcatggcaattgcaaacacaaggactcacacctatgaatgccggggatgc
cgtaacaaaactcagatctctttggttcgaatgccctatgcctgcaagctccttttccaa
gaactgatgtctatgagtattgcgcctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
