Apteryx rowi (Okarito brown kiwi): 112974206
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Entry
112974206 CDS
T07573
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03430
Mismatch repair
arow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112974206 (PMS2)
03460 Fanconi anemia pathway
112974206 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arow03400
]
112974206 (PMS2)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112974206 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112974206
NCBI-ProteinID:
XP_025938715
Ensembl:
ENSARWG00000000230
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MEAAAPAPAPCLEPAKAIKAIDRKSVHQICSGQVVLNLGTAVKELVENSLDAGATNVDIK
LKDYGAELIEVSDNGSGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCAL
SSDVTIFTCHKSAKVGTRLVFDHNGKITQKTPYPRQQGTTVSVQQLFYTLPVRHKEFQRN
IKKEYAKMVQILQAYCIVSKGVRINCTNQVGQGKKSSVVSTTGSPNLKENIGAVFGQKQL
QSLIPFVQLPPNETVCEEYGLDTTDMPQNFYSITGFVSRCDHGVGRSATDRQFFFINQRP
CDPAKVAKLVNEIYHLYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILK
TSLIEMFGSDVNKLNVNQKLLDIAGNLKRTLPEETEEPQVEMLPDSETQNPSSEGNRIMT
LARLRESFSLHQMTESNFQSPKKVKRQHSSPRQLPSFDTTLSPVNTPKAVLSEESESCCE
MESKMSVTSRYLRKLEDNTDSGFCSTSAESDVGYNMPEAGSCISSERVANSPEEEFCDSK
EELQNECLETAGQSEKSLECDVQFLGTVHELNRVNDWNNPNKLSQVASSSSPSKKCFKSG
ADDLKADTCPEEKNTKNYVASVDALVEVKKKTVSLEFSMKVLAEKVKKVIWQQQKRTETR
NYRRFKAKISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHAT
DEKYNFEMLQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQ
RVKLLSLPTSKNWTFGPQDIDEMIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALN
IQEMRKLVTHMGEIEHPWNCPHGRPTMRHIASLDLISPE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggctgctcccgcgcccgcgccctgcttggagcctgccaaagccatcaaggcc
atagaccgcaagtccgttcatcagatctgttcggggcaggtggtcctgaatctaggtact
gccgtgaaggagttggtggaaaacagcctggatgctggagctaccaacgttgatataaaa
cttaaagattatggagcagaactgatagaagtttcagataatggaagtggagtggaagag
gaaaactttgaaggcttgactctgaaacattatacatcaaagatacaagacttttccgat
ctaatacatgttgaaacatttgggtttcgaggtgaagctctgagttcactgtgtgcatta
agcagtgatgttaccatttttacctgtcataagtctgcaaaggttggaactcgtttggta
tttgatcataatggtaaaattactcagaaaactccttatccacgacaacaaggaacaact
gttagcgtacaacagttattctatactttgccagtgcggcataaggaatttcaaagaaac
attaaaaaggaatatgcaaaaatggtccagatattgcaagcatactgcattgtttcaaaa
ggagttcgcattaactgcacaaatcaagttggccaagggaaaaaaagctctgtggtatcc
actactggaagtcctaacttaaaggaaaacattggagcagtatttgggcaaaaacagttg
cagagcctcattccctttgttcagctacctcctaatgaaactgtttgtgaagaatatgga
ctcgacactactgacatgccacaaaatttttatagtatcacaggcttcgtttctcgttgt
gatcatggtgttggaaggagtgcaacagacagacagtttttctttatcaaccagcgtccg
tgcgatccagcaaaggttgccaagctcgtgaatgaaatttatcacttatacaataagcac
cagtatccatttattgttcttaacatttgtgtggattctgagtgtgttgacatcaatgta
actccagacaaaaggcaaattttactgcaggaggagaaacttctattagcaattttaaaa
acttctctgatagagatgtttggtagcgatgttaacaagctgaatgtcaatcagaaactt
ctggacattgcaggcaacttgaagaggactcttcctgaagagacagaagagcctcaggta
gaaatgctgcctgactctgaaactcaaaatccaagtagtgaaggaaacagaataatgact
ctagccagattaagggagtcgttctctctccatcaaatgacagagagtaattttcaaagc
cctaaaaaggtaaaacggcagcacagctcccccaggcaacttccgtcatttgataccact
ttgagtcctgtaaacactccgaaggctgtcttgagtgaggaatctgagagctgttgtgaa
atggagtcaaagatgtcggttacaagcagatatttgagaaagttagaagataatacagat
tctgggttctgtagcacctctgctgaatcagatgttgggtataatatgccagaagctggg
agctgcatcagcagtgaaagagtagctaattctcctgaagaagaattctgtgactcaaaa
gaggagcttcaaaatgaatgtcttgaaactgctggacagagtgagaaatcactggaatgt
gatgtgcagttcttgggcactgtgcatgagttaaaccgagtgaatgactggaataatcca
aataagttatctcaagtagccagtagttcttccccaagcaaaaagtgttttaaaagtgga
gcagatgatttaaaggcagatacatgtcctgaagagaagaatactaagaactatgtggca
agtgttgatgcactggtagaagttaaaaagaaaactgtatcacttgaattctctatgaag
gttttagcagaaaaggtaaaaaaggtaatatggcagcaacagaaaaggacagaaacacgg
aattatagaagatttaaagcaaaaattagtcctggagaaaataaagtagcagaagatgaa
ttaagaaaagagatcagtaaagaaatgtttgcaaaaatggagatcattggccaattcaac
ttagggtttataatagcaaagttgaattctgatcttttcataattgaccaacatgctact
gatgagaaatacaactttgagatgttacaacaacacactgttctccaaggtcagaagctg
attgtgcctcaaaatcttaatttaactgctgtaaatgaaactgtattgattgaaaacctg
gaaatattcagaaaaaatgggtttgattttgtcataaatgaaaatgctcctgtaactcaa
agagttaaattgctttccttgccaacaagcaaaaattggacttttggtccacaagacata
gatgaaatgattttcatgttaagtgactgccctggagtcatgtgtaggccctccagggtc
agacagatgtttgcttctcgagcttgcagaaagtctgtgatgattggaactgcactgaat
atacaggagatgaggaaactggtcacccatatgggtgagatcgaacatccctggaactgc
ccccacggaaggcctacaatgagacacatagccagtctagatttgatttcaccagaataa
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