Apteryx rowi (Okarito brown kiwi): 112974282
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Entry
112974282 CDS
T07573
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04010
MAPK signaling pathway
arow04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112974282 (CACNA1H)
04020 Calcium signaling pathway
112974282 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arow04040
]
112974282 (CACNA1H)
Ion channels [BR:
arow04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112974282 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
112974282
NCBI-ProteinID:
XP_025938868
Ensembl:
ENSARWG00000017298
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRTDEAEE
NPFICSSHRENGMQKCSNIPNRKEYKVECTLSMDSYTPSLYNPDFSSRNACINWNQYYNV
CMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICH
IFRKVKRRTIRLYNNWQSKRRKKVNPNSTTNGQSRRGKKRITSIHHLIHHHHHHHHHYHI
SNGSPRGPRSNPEICDLELKVMKPGGQLMLPSPSPNLQSSAPPPDSESVHSIYHADCHVE
GPQVNCKSSNAPASIKLTTGLSNHGNMNYPTILPSPTSKASSVPVPKGKKNGNSPVAMVN
SPVNLGTDPYEKLQQLVGEHGLRRTPSRLSGLSVACPLPGPPGGTLTCELQNCPFCATIL
EDPEFAFSESDSYDSDSNGVYEFTQDLRHGDQRDQLQQQRGRRKRRKKKPKERNKVARLW
KAFGNKLKRIVDSKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALE
MLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMP
ALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDS
LLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQ
AEGDANRSDTDEDKNSANFDDDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMR
TAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSYDQKSLSSLRSSPCANWGTSSNWG
SRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTVSRASLHRRAESL
DYRSSLDLPELLQLPTMRHSLSISPVAVLPAEYQDCNGKMVHVPSEFFLRIDSHKEDTLD
YEDDMEDSYCYRIRKVLEPYKPEWCKNHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVL
VFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQ
SSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVE
TLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNAHYRWV
RRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLI
VSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEIYLSEAQRRPYY
ADYSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVF
VFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVL
RIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEEN
PCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYF
VTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGATTSATGGSRGGT
VAPDGRAPYRSQETMKSELAMQAKHQALEALSCENVSLAIPDSDTLEGGETPMMEISSFC
SVSHHVLTPSHKTPGHEAEGGAACLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPA
KAPFPLHEVEMETYPCKSQRGSITSIRSQPVGTCSSLRVPTESFQLAARSPNHEGRHRWK
ILPPHVIPRSPTLNKLLCRQEAVRTDSVDGQTPDSKDSLQAEPRETLPSAKQSQSTFPPS
PLHPAAASLPGTPPRSPPGSPHRHASVHTRKHTFSQRSVASRPPSPSGSPPDPESGLFES
SDLADEEVSHINSSAKDWGERSDAGSRSTSPFISPAPSPAPLKNCSTTSLSRSSGKEKDL
KKFYSIDTKGFLAKPSWADDQRRHSIEICPSINDGDCSFEEAAEEKQRSPAHIQPESEYI
HGARRKKKMSPPCISIDPPMEDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELAESQ
PGDPASKAERRGQPPCRGEHLTIPNFSFEQSDGGSLSSLSDLLLDSGQSTPSSADSRPDP
AAPELKKPDHLKTQWSNAEKSKELLGVAKSPLRKQDLVPGTVATEEDVEEPV
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcctcctgaactgcgtcaccctgggcatgttccagccttgcgaagacgtg
gagtgccagtcggagcggtgcaccatcctggaggcatttgacgacttcattttcgctttc
tttgcggtggagatggtcatcaagatggtggctttggggatcttcgggcagaagtgttac
cttggagatacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggagtac
tcgctggatggacacaacgtcagtctgtctgcgatccgcaccgtccgggtactgaggccg
ctgcgagccattaacagggtcccaagtatgcgaatactcgtcaccctgctgttagatact
ctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttgggatt
gtcggtgtgcagctctgggcagggctgctgaggaacaggtgtttcctagacaggaatttt
gcaatgacatacaacctgaccttcctgcatccgtactaccggacagacgaagcagaggag
aatccgttcatctgctcatcccatcgtgaaaacggcatgcagaaatgctccaacatccca
aacaggaaggagtacaaggtggagtgcaccttgagcatggactcctacactccgagttta
tacaaccctgacttcagcagcaggaatgcctgcataaactggaaccagtattacaatgta
tgcatggcaggggatgtaaacccacacaacggagctattaattttgataatattggctac
gcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattat
gtgatggatgcacattctttttacaattttatatattttatattgcttataatagttggt
tccttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaag
caacgggagaaccagctgatgcaggagcagcgggcccgttatctctccaatgacagcaca
attgccagcttctcagagccaggtagttgctatgaggagctgctcaaatatatctgccac
atcttcaggaaggtgaaacggcggacaatacgcctgtacaacaactggcagagcaagcgc
cggaaaaaagttaatcccaacagcaccacaaatgggcaaagccgccgaggcaaaaagcgc
atcacctccattcaccacctcatccaccaccaccaccaccatcaccaccactatcacatc
agcaatgggagccctcgggggccacgctccaaccctgagatctgtgatctggaactcaag
gtgatgaaacctggaggccaactgatgcttccctctccatcacccaacttgcagagctct
gctcctcctccagactcagagtctgtgcacagcatttaccatgctgactgtcatgttgaa
ggaccacaggtaaactgtaagtcttccaatgcccctgcaagcattaaactgaccactgga
ctctccaaccatggcaacatgaactatcctactatcctgccttctccaactagcaaagct
agttccgttccagttcccaaaggaaagaagaatggtaattcacctgtggccatggttaat
agcccagtaaatttgggcacggatccttatgagaagctgcagcaactggtaggagagcat
ggtctgcggcggacgcccagccggctctcggggctgagcgtggcctgcccgctgcccggc
ccccctggcggcacgctgacctgcgagctccagaactgccccttctgcgccaccatcctg
gaggaccccgagttcgccttcagcgagtccgacagctacgactcggacagcaacggcgtc
tacgagttcacccaggacctgcggcacggcgaccagcgggaccagctccagcagcagcgg
ggccggaggaagaggaggaagaagaagcccaaggagaggaacaaagtcgcccggctctgg
aaagccttcggcaacaagctgaaaaggatcgtggacagcaagtacttcaaccgcgggatc
atgatagccattctgatcaacacgctgagcatgggcatcgagtaccacgagcagccagac
gagttgaccaatgccttggagatcagtaacatcgtcttcaccagcatgtttgccctggag
atgctcctgaaactccttgcctttggcctctttggctacatcaagaacccgtacaacatc
ttcgatgggattattgttgtcatcagcgtctgggagatcatcggccagtcggatggaggc
ctctctgtgctacgaacttttcggctgctcagggtgctgaaactggtgcgtttcatgccc
gccctccgtcgccagctggtggtcctgatgaagacaatggacaacgtagccactttctgc
atgttgctcatgctcttcatctttatcttcagcattctcggcatgcatctgtttggatgc
aagttcagcctgaaaactgatacgggagacacagttccagatagaaagaattttgattcc
ttgctttgggccattgtgacagtctttcagatcctcactcaagaggactggaatgtggtc
ctctacaatgggatggcttctacatcctcctgggcagctctctattttgtggccctgatg
accttcggcaattacgtgctcttcaaccttcttgttgccattctggtagaaggcttccaa
gcagagggtgatgccaataggtcagacacagatgaggacaagaactctgccaactttgat
gatgattttgagaagctgaaagacctccgagcaacagagatgaagatgtactcactcgct
gtcaccccgaatggacacttggaaggcagggggagcatgccacctcctataattatgcgc
actgctgccacacctatgcccacgccgaagtgttccccacacatggattcagtgcacact
tttgtggactcgaggagagggagcaatgcttcgctagaccccttgagctatgatcagaag
tccttgtctagcctccgcagttccccttgtgccaactgggggaccagcagcaactggggg
agccgacgctcaagctggaacagcctgggcagagccccgagcctcaaaaagaagaaccag
tcaggagaaagagagtccttgctctcaggggaggggaaaggcagcacagacgatgactcc
gatgatgccaagtccagcacggtcagcagggcctcactgcaccgccgggcagagtccctg
gactaccgcagctccctggacctgcccgagctgctccagctgcctaccatgcgccactcg
ctcagtatcagccctgtggccgttctgcctgccgagtaccaagactgcaacggcaagatg
gtgcatgtccccagtgagttcttcctgcgcatcgacagccacaaggaggatacattggac
tatgaggatgacatggaggatagttactgctaccggattcgtaaagtcctagagccctac
aaaccagagtggtgcaagaatcacgaagattggtccctctacttgttttccccacagaat
cggttccgagtgatgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtgctg
gtcttcatatttctcaactgcatcactatagcgctggagcgaccagatatagacccacac
agcacggaaaggatattcctaagtgtttccaattacattttcactgcaatctttgtggct
gaaatgatggttaaggtggtagctcttggctttttctctggggagaacacctatctccag
agcagctggaatgtcctagatggagtcctggtctttgtatctatcattgacattattgtc
tccatggcatcggcaggcggagctaagatcctgggtgtccttcgagtgttgagacttctg
cggaccttgagacctctccgagtcatcagcagagccccaggtctgaagcttgtggtagaa
accttgatctcctccttgaggcctattgggaatatcgttctcatctgctgtgctttcttc
attatctttgggattttaggggtgcagctttttaaaggcaaattctactactgtgatggt
cctgatgtgaaaaacatcactacgaagactgactgcactaatgcacactacagatgggtt
cggaggaagtacaattttgacaatttgggacaggctctcatgtccttgtttgtcctctcc
tccaaagatggctgggtgaacatcatgtatgatggtctggatgctgtgggtattgaccaa
cagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctcatc
gtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaactttcacaagtgc
cggcagcaccaggaggcggaggaggcccggcgtcgggaggagaagcggctgagacgcttg
gagaaaaagcgcaggagtaaggagatatacctgtctgaagcccagcgcaggccttattac
gctgactattccccagcacggaagtacattcacaccctctgcaccagccactacctggac
ctcttcatcacattcatcattggggtcaacgtcatcactatgtcaatggaacactacaac
cagccgaagtccctggatgaagctctgaagtactgcaactatgtgttcaccatagttttt
gtgttcgaggcagttctgaagttggtggcatttggttttcgaaggttctttaaggacagg
tggaatcagctggatttggccatagttcttttatcaattgtgggaatcacgctggaggag
attgagatgaatgctgcactgcccatcaatcccacaataatacgcatcatgcgggtgctg
agaatagccagagtgctgaaactgcttaaaatggccactgggatgcgagctctcctggac
acagtggtgcaggcgcttccccaggtagggaaccttggccttctttttatgctcctgttt
tttatctatgctgccctgggagtggaattgtttggcaagctagactgcagtgaagaaaat
ccctgcgaaggtctgagccgacacgcaactttcaccaacttcggcatggcctttctcacc
ctcttcagggtgtcaacaggggacaactggaatggtatcatgaaggacactctccgggaa
tgcacccgggaagacaagcactgcctcagttacctgcctgtcatctctcctgtctacttc
gtcacctttgtcctcatcgcacagtttgtcctggtcaacgtggtggtggcagtactgatg
aagcacttggaggagagcaacaaggaggccaaggaggatgctgagatggatgcagagatc
gagctggagatgtccagaggagcaaccacctcagctactggagggagcaggggaggcact
gtggccccggatggcagggcaccctacagaagtcaggagaccatgaagtcggagttggca
atgcaggcgaagcaccaagccctggaggcgctgagctgtgagaatgtgtccttagccatc
ccagactcagacacgctggaggggggagagactcccatgatggaaatctcgtccttctgc
tctgtttcccaccatgtcctgacaccttcccacaaaaccccaggccacgaggctgagggc
ggtgcagcctgtctgcggccccaggactcccagaacctgctgacggtccgcaagatctcc
gtttcccggatgcactccttgcccaatgacagctacatgttccgccctgtgatgccagca
aaagcccctttccccctccacgaggtggagatggagacgtatccctgcaaatcccaaaga
gggtccatcacctccatccgctcccagcccgtgggaacgtgttcctctctgagagtccca
acagagtccttccagctggctgctcgttctcccaaccatgaaggccgccaccggtggaag
atccttcccccacatgtcatacctcgatctcctactctcaacaagctgctgtgcagacag
gaggctgttagaacggactctgtggacgggcagactccagactccaaggacagcctgcaa
gcggagcccagagagacgctaccatcagccaagcagtcccaaagcaccttccccccgagc
ccgctccatcccgcggctgcctccctgccgggcacccctccgcgctccccgccgggctcc
ccgcaccggcacgccagcgtccacacgcggaagcacaccttcagccagcgcagcgtcgcc
agccggccgcccagccccagcggcagcccgcccgaccccgagagcggcctcttcgagtcc
tccgacctggctgatgaggaggttagccacatcaacagctccgccaaagactggggcgag
cgctcggacgccgggagccgctcgacttcgcccttcatctccccggccccgtctccagcg
cccctcaagaactgcagcacaactagcctgtccaggagcagcggcaaagagaaggacttg
aagaagttttacagcatcgacacgaagggcttcctagctaagcccagctgggcagacgac
caaaggcggcactccatcgagatctgcccctccatcaacgatggagactgtagctttgaa
gaggctgcggaggaaaagcagcggtcgcctgcccacatccagccggagtcggagtacatc
catggagctcggaggaagaagaagatgagcccgccctgcatttctatagatcctcccatg
gaggacgacggcggggcggcctcccgcaccaaaccctccgagaacagcatgctgcggcga
aggaccccgtcctgcgagttcccggcctaccgagagtccctggagctcgcggagagccag
cccggggacccggcctccaaagcggagcgccggggccagcccccgtgccgcggggagcac
ctgaccatccccaacttctccttcgagcagtcggacggcggctccttgagcagcctctcg
gatctcctgctggacagcggccagtccacgccgtcctccgcagactcccggcccgacccc
gcggcccccgaactcaaaaagcccgatcacttaaaaactcagtggagcaacgccgagaaa
agcaaagagctgctgggcgttgccaagagccccctccggaagcaggacttggtgccgggg
actgttgcgacagaggaggacgtggaggagccggtatag
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integrated database retrieval system
