Apteryx rowi (Okarito brown kiwi): 112974297
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Entry
112974297 CDS
T07573
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03440
Homologous recombination
arow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112974297 (TOP3A)
03460 Fanconi anemia pathway
112974297 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arow03032
]
112974297 (TOP3A)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112974297 (TOP3A)
Enzymes [BR:
arow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112974297 (TOP3A)
DNA replication proteins [BR:
arow03032
]
Eukaryotic type
DNA Topoisomerases
112974297 (TOP3A)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
112974297 (TOP3A)
FA (Fanconi anemia) pathway
112974297 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
112974297
NCBI-ProteinID:
XP_025938893
Ensembl:
ENSARWG00000017370
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MNVQVRLFASCGVRMLPQPWRLFSRAAEDMTLQRIRKVLCVAEKNDAAKGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAET
EKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLRVFRARF
SEITLHAVRSACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPDVLADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHEHEDSTVVFNWKRNRLFNHTACLV
LYHMCMEDPVATVVEVASKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDQSWGAFAQRILDEGGPTPRNGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIAKERFVAQGLMILARNYL
EVYPYEKWSDKVIPVYQKGSRFQPTTVEMVDGETSPPSLLTEADLIALMEKHGIGTDATH
AEHIETIKLRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKLVVLQQQVQKYKEVFIEAVARANKLDQALAQYFGQATEIAEQEEVYPAMPVSIRKC
PQCDNDMVLKTKKNGGFYLSCTGYPACKTAVWFPDFVLDVAKDESVCAVCKPHPVHRLKF
KFKRGSVPPMMPLEFVGCIGGCDEMLRELLDLKYLHRSSQPVCSASQQANHLQANHSFNR
GVGGDNRHVRRTTNLASGHLLSLSSTRAPRPAPSAAPEDGNDAVMCNCGNEAALLTVRKE
GPNQGRQFYKCGASTCNFFLWADQQSEDRGNAAPPGSALPRPFGGRGPAGFQSPGGGRGP
ELFGSNSSDSGGGGGTVCKCDQPAVTRTVQKDGPNKGRRFHTCSKPRDQQCGFFQWADEN
MAPGASGDSLNHFGSSGRELGSKAKRPSSLSSAATAKKPRTCSICHQPGHTRKTCPQDH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcaagtgaggctctttgctagctgtggagtcaggatgctgcctcagccctgg
cgtctcttctctcgggctgcagaggatatgacattgcaaaggatccggaaggtcctgtgc
gtggctgagaagaatgatgctgccaaaggaattgcagatcttctctccaacagcagaatg
cgacggagagaagggttttccaagttcaacaagatctacgagtatgactaccagatgttt
ggccagaatgttactatggtgatgacgtccgtgtcaggacatttactggctcatgatttt
aagttgccttttcgcaaatggcatagctgcaaccccctagcactttttgatgctgaaacc
gagaagtattgccctgaaaattatgtggatattaagagaaccctggaacgagaagtccag
caatgccaagctctggtgatctggactgattgcgatcgagaaggagagaacattggtttt
gaaattattcacgtttgcaaagctgtaaaaccaaaccttcgggttttccgagctcgtttt
tcagagattacacttcatgctgtcagatcagcctgtgagaatctcacccagccagatcaa
aaaactagtgatgctgttgatgtcaggcaggagctggacctcaggataggtgctgccttc
accagattccagacactgaggctccagaagattttccctgatgttctagcagatcaactg
atcagctatggtagctgccagttcccaacactggggtttgtagttgaacgctttaaagcc
atccaggcctttgttcctgaagctttctataaaatcaaagtgacacatgaacatgaggac
agcactgtggtcttcaactggaagaggaatcgactatttaatcacacagcatgcctggtc
ctttaccacatgtgtatggaggatcctgtagcaactgtcgttgaggttgcaagcaagcca
aagagcaaatggagacctctgcccctggacactgtggaacttgagaagttggcttcccgt
aaactgaaaataaatgcaaaagaaaccatgagaatagcagaaaaactctacactcaaggg
tttataagctatccccgaactgagaccaacattttccccaaggagctgaacctctctgcc
ttggtacaacagcagacgcaggaccaaagctggggagcgtttgcgcagaggattttggat
gagggtgggccaacccctcggaatggaaccaaatcagatcaggctcaccctcccattcat
cccacaaaatacactgctaacctgcaggggaatgagcagagactatatgaattcattgtg
cgccattttttggcttgctgctctcaagatgccaagggacaggaaacaactgtggagatt
gacatcgctaaagagcgattcgtcgctcaaggactaatgatcttggcccgaaactatctg
gaagtctatccttatgagaagtggagcgataaggttatcccagtatatcagaaagggtct
cgttttcagcccaccacagtggagatggtggatggggaaaccagccctccatcgctcctc
accgaagcagatctcattgcgctcatggagaaacacggcattgggactgatgccactcac
gctgagcacattgagaccattaagctgcggatgtatgtgggccttactgcggatcagagg
ttccttccaggccacctgggcatggggctggttgaaggttatgattccatgggctatgag
atgtccaagcctgaccttcgagctgagctggaggctgacctgaagctgatctgtgagggg
aagaaagacaaacttgtagtgttgcagcagcaggtccagaagtataaggaagtcttcatc
gaggctgtggctagagccaacaaattggatcaagccctggctcagtattttggacaagcc
acagaaattgcagagcaagaggaagtctacccagcaatgccggtttccattcgaaagtgt
ccacagtgcgacaatgatatggtcctgaagaccaagaagaatggcgggttctatctcagc
tgcacgggctatccagcttgtaaaactgcagtctggtttcctgactttgtgctggatgta
gctaaggatgagagtgtctgcgctgtgtgcaaaccccatccggttcacagactgaaattt
aagttcaagagaggcagtgtcccacccatgatgcccctggagtttgtcggctgtattgga
ggctgtgatgagatgctaagagagctcttggacctgaaatacttgcacaggtcatcccaa
cccgtgtgctcagccagccagcaagctaatcacttgcaggccaaccactcctttaacaga
ggggttggtggcgataacaggcacgtgaggaggaccacaaacctggcctcagggcaccta
ctatccttgagttcaacaagggcacccaggcctgctccttctgcagctccagaggatggg
aacgatgcagtgatgtgcaactgtgggaacgaagcagcgctgctaactgtgcgcaaagaa
gggcccaatcaaggcaggcagttttacaaatgcggtgccagtacctgcaactttttcctc
tgggctgatcagcagtcagaggacagaggcaacgcggctccaccaggctctgcgctgccc
cggccctttgggggaaggggcccagcaggctttcagagcccaggaggagggagaggccca
gagctcttcggaagcaacagctccgattcaggaggtgggggcggcacagtttgcaagtgt
gatcagccggccgtcacgcgcaccgtccaaaaggacgggcctaacaaaggacggcggttc
cacacctgctctaaacccagagaccagcagtgcggcttcttccagtgggcagacgaaaac
atggcaccaggagcttctggagattctttgaaccattttgggagcagtggaagagagctg
ggaagtaaagctaagagaccaagcagtctttcctcagcagccactgccaagaaaccacgg
acctgtagcatttgccaccagcctggccacaccaggaaaacttgccctcaagaccactga
DBGET
integrated database retrieval system
