Apteryx rowi (Okarito brown kiwi): 112974350
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Entry
112974350 CDS
T07573
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arow01002
]
112974350 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112974350 (USP42)
Enzymes [BR:
arow01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112974350 (USP42)
Peptidases and inhibitors [BR:
arow01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112974350 (USP42)
Ubiquitin system [BR:
arow04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112974350 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112974350
NCBI-ProteinID:
XP_025939008
Ensembl:
ENSARWG00000000276
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSGKSKKPRTKNMKSRTANWGRVPPTEDPNQVSVNQGPGGAI
YCRSSEKSKPFAQRDLVINDGIAPPQRILFPPEKICMDWQQTQSVGVGLYNLGNTCFLNS
ALQCLTYTPPLANYMLSLEHTQSCREQGFCMMCTMEAHINQVLCCSADAIKPTPVINDLR
RIGKHFRFGSQEDAHEFLRYTVDAMQKACLNGSTKLDRSSQATTFIHQIFGGFLRSRVKC
LNCKAVSDTYEAFLDITLDIKAASSVTRALEQFVKPEQLDGENCYKCSKCKKMVPASKRF
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLLYALYAVLVHSG
VNCHAGHYFCYIKAGNGLWYQMNDASVVLCDIKTVLSQQAYLLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANNKQTGFMGPRLPPHMIKNSSRLNGNGSLKEDPNTVGVTLKRPSS
APPTACVQNWAITRPSITDPSKKQKITISIHNKLPARQTVSQPDCLSSAVEDEDLSKPVP
SSTITNSSAAESTSNASTMSVATNISKQEVPDEIFVEPAVNGNPKLSSDNTVPYGAESSG
KSEEESKGLFKRNCNVISSNGILIGKVVRTLQNSHSSCQNAEEERSQHELPKNDSLNGAI
SLDNESKENGLKLDDSTCQVQPVKPSEIFFSKTNGLLEKMPIALPPVPQEIILESLTYSQ
LNSLSEEISVPGPQKSSENDALMETVVMEALFVYEESRKVPSDFSCEVENLFVQSDSETI
STKEEITESIVTKADNAHPNINGQHKVRKRSLDAEDEFLGQCVSEDSADKDKPRRSKESE
LISKENPLYIKGSPETEEKLGQTSSLKSDIECSSKKLASLDITDKCQDTKDISNNYIEVP
PVNDSSITKLDKVLESQFSRGSEGLSNKKCEEYKHRKKYKKKIYDSKKTDKEHYRRKREH
SDTEEREKQNRSKTDGHSQKRRCSRSVETNKQNRHKQEYCNGSKYRSSHNERSSPDNGRS
SGKHPRYRSRSRGRTEQDRNRYYHSKGERTWSRERYYQDEPRRWEKCRYYNDYYSSHAMR
DGRERKFSHCDKDFDKSSQAYNNRSHKDYHYKSRWLHNSLSREEDVHHFSSHRADLHHCS
VPQQQSEKYSRERHVLLPVSVHSNFENSSQNDEKNRKRKYSRAEGSESEIEKKRRKIEKE
LSGDQKLKKYKKVKKKKKSKDKHREKDYKLYDLDFSVLHFDNDNRKRKKKKKKKKHIRKL
KGFLEYLDPRFQKKTWEKKEESCPPDGYLCEQYRIQGSKQPYKEGKPSSAGESKKYSSIT
SSEYMKDIDLPSPKHTEFAVINPPEDALQFNTWRMRSLLTEAFNTQTKSTIKTNSLPSKA
TIYLPPNPTTYLPSKPTNKHHQNNTNYQNLKIIIRTIKLSSKQNPIISGASDFCTEFYHE
RTFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaaatctaaaaagtcgtcatccaggcggtct
ggcaaatcaaagaaaccccgtactaaaaacatgaagtcacgcaccgcaaattggggtcgg
gtaccacctacagaagatccaaaccaagtctctgtgaaccaaggacctggaggtgctatt
tattgcagatcatctgaaaaatctaaaccttttgcccaaagagatctagtcattaatgac
ggaattgctccaccgcagaggattctctttccgcctgagaagatttgtatggactggcag
caaacacaaagtgttggagttggactctacaaccttggcaatacctgcttcctcaattct
gctctacaatgtttgacttacacaccccctctcgccaattacatgctttctcttgaacac
acccagtcgtgtcgtgagcaaggcttctgcatgatgtgcacaatggaagctcacattaac
caggtcctgtgttgctctgctgatgccatcaaacctacacctgtcatcaatgaccttaga
cgaataggaaaacatttccgttttggcagtcaggaagacgcacacgaattcttacgctac
accgttgatgccatgcagaaagcttgtttaaatggaagtaccaaattagacagatcctct
caagctaccacattcattcatcaaatatttggaggatttctaagatctagagtaaagtgc
ttgaactgcaaagcagtttcggatacctacgaggcattccttgatattactttggatata
aaggcagcttcatctgtcaccagagctctagaacaatttgtgaaacctgaacagctggat
ggtgaaaattgctataaatgtagcaagtgtaaaaagatggttcctgcttcaaagagattt
acaatacaccgttcttccaatgtgctcacaatatccctgaaaagatttgcaaattttact
ggtggaaagatcaacaaggatgtaaaatatcctgaatatttggatcttcgagcatatatg
tcccagtcaattggagaaccactgctctatgccttatatgcagtcctggtacatagtggt
gttaactgtcatgcaggacactatttctgctacataaaggctggtaatggactttggtac
cagatgaatgatgcctctgtagtcctttgtgacataaaaacagttctcagtcagcaagct
tatttgcttttttatatcaggcgctatgatttgacacttggagaacgtgctttttactta
ccagcaccgtcttaccctcgttcattccttggtcagcggggggctaataataagcagact
ggatttatgggaccacggcttcctcctcacatgattaagaattcaagtcgtttaaatgga
aatggttctctaaaagaggatcccaataccgttggtgtcaccctgaaaaggccatcttca
gctccaccaacagcttgcgttcaaaactgggcaattaccaggccttcaattaccgatccc
tcaaaaaaacagaagatcactatcagtattcataataaattgcctgcacgtcagactgtg
tctcagcctgactgtcttagcagtgctgtggaggatgaggatctgagcaagcctgttcct
tcatccacaattacaaattcttctgcagcagagtctacctcaaatgcatctacaatgtca
gttgctactaacatttccaaacaagaagttcctgatgaaatttttgtcgagccagcagtg
aatggaaatcctaaactcagctccgataacacagtcccttacggtgcagaatcttcagga
aaatctgaggaggagtcgaagggcttatttaaaaggaattgcaatgtaatatcttctaat
ggaattttgattggaaaggtagtccgtacattgcagaattcccattcttcctgtcagaat
gctgaagaagaaagatcccagcatgagctgccaaaaaatgattcattaaatggtgctatt
agtttagataatgaatctaaagaaaatggactgaaacttgatgattccacttgccaagta
caacctgttaaaccttcagagattttcttttctaaaacaaatggattgcttgaaaaaatg
cctatagctttgcctccagtccctcaagaaataatcttagaatccctcacatacagccag
ttgaacagcttgtcagaggaaataagtgtccctggacctcaaaaatcttctgagaatgac
gctcttatggaaactgtagtgatggaagcactgtttgtctatgaagaatccaggaaggtt
ccttctgactttagctgtgaggtcgagaatctttttgttcaatcagattctgaaaccatt
tctaccaaagaagaaattactgaaagtattgtaacaaaagctgataatgcacatcccaat
atcaacggccagcacaaggtcaggaaaagatccttggacgctgaagatgaattccttggg
cagtgtgtgtctgaagacagtgcagacaaagacaaaccaagaagatcaaaagaatcagaa
ctcatttcaaaagaaaatcctttgtacatcaaagggtctcctgagactgaagagaaatta
gggcaaacttcctctttaaagtctgacattgaatgtagttctaaaaaacttgcatctcta
gatattacagataaatgccaagatacaaaggacatttctaataactatatagaagtaccg
cctgttaatgactcttcaatcacaaagctggataaagttttggagagtcaattttctaga
ggaagtgagggactgagtaataaaaaatgtgaagaatacaagcataggaaaaaatataag
aaaaaaatatatgactctaaaaaaactgacaaagagcactaccgcaggaagagagaacac
tctgacactgaggagagggagaagcaaaacagaagcaaaacagatggtcattctcagaag
aggaggtgctctcgcagtgtggaaacaaataagcaaaatcgtcataagcaggagtattgc
aatggaagcaagtacagatcttcccataatgaaagaagcagccctgataatggcagaagc
tcaggaaaacatcctcgttacagatccagaagcagagggagaacagaacaagacagaaat
aggtattatcattccaaaggagagcgaacttggagcagagaaagatactaccaggatgaa
ccacggagatgggaaaaatgtagatactacaacgattactattcctctcatgcaatgaga
gatggtagagagagaaagttctctcattgtgataaagactttgacaaatcgagtcaagct
tacaacaacaggtcacataaggattatcattacaaaagcagatggctgcacaattcactc
tctcgagaggaagatgtgcatcactttagcagtcacagagcagacttgcatcattgttcg
gtacctcagcagcaatctgaaaaatactcgcgtgaaagacatgtgcttctacctgtgtca
gttcattcaaattttgagaactcctcccagaacgatgaaaaaaacagaaaaagaaaatat
tcccgtgcagaggggagtgaaagcgaaatagaaaagaaacgcagaaagatagaaaaagag
ctttcaggtgatcaaaaattgaaaaaatacaagaaggtcaagaagaaaaagaagtccaaa
gataaacatcgagagaaggattacaaactttatgatttggatttctctgtgctccacttt
gacaatgacaatcgcaaacgtaagaaaaagaagaaaaagaagaaacacatcaggaaactg
aaaggcttcttggaatacttagatcctcgtttccagaaaaaaacatgggagaagaaggaa
gaatcctgtcctccagatggctatttatgtgagcaatacagaatccagggcagtaaacaa
ccctacaaggaagggaagccttccagtgctggtgaaagcaagaaatatagttccatcaca
tccagcgagtacatgaaagatatagatctgccttctcctaagcacactgaatttgcagtt
attaaccctccagaggacgctttgcaatttaacacctggagaatgcggagcttactgacg
gaagccttcaatactcaaactaaatctaccatcaaaaccaacagcctaccatcaaaagca
acaatttatttaccaccaaacccaacaacttatttaccatcaaaaccaacaaataaacat
catcaaaacaatactaactatcaaaacctaaaaattattatcagaacaataaaattatca
tcaaaacaaaacccaatcataagtggtgcttcagatttctgtacagaattttaccatgaa
agaacttttttttag
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integrated database retrieval system
