Apteryx rowi (Okarito brown kiwi): 112974931
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Entry
112974931 CDS
T07573
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112974931 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arow03400
]
112974931 (MSH6)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112974931 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
112974931
NCBI-ProteinID:
XP_025940230
Ensembl:
ENSARWG00000000273
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MPVAAEGPRGTWRCRCPCFPPAAAAAGEGPVFGSVSCDFSPGDLVWAKMEGYPWWPCLIY
NHPTEGTIVRGKGKSARIHVQFFDDSPTRGWVSIKYLKPYKGSSDGEALKGGTFYSTKPE
IKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEEMEQMSESASGDSDDCNSEEG
VKTNKRVANRGRSAVKAKRRRVLDSDSDHEGSDVEFKPDVKEAASSEEASSGVDENESTG
TETDAESIAESPIKVPSKRKRRDTSKPAKRNSLGNERSETPKRAAVVSLEAKSKLTSFAA
PENFESQANACSGGIGGFAVWEHEKLDWLQEGKRKDARRRRQDDPDYDPCTLYVPEDYLN
KCTPGIRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTAVNELGLIFMKGTWAHSGFPET
AFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSMAHPTKFDKVVRREICRIITKGTQTY
SVLDCDPSENHNKYLLCIKEKEDSSGHRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLV
AHYTPVQVLFEKGNLSVDTQKILKGSLVSCIQEGLSSGSQFWNASKTLKVLLEEEYFKEK
QNSDNGCSLPSVIKFMTSESDSLGLTPGENSELALSALGGCIFYLKRCLIDQELLSLGNF
EEYIPVDIDIAKTTSSSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCC
TPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLERLLSKIH
SIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEEIASDFKSKV
LKQLVTRKARNPEGRFPDLNAELKRWDTAFDHNQARKTGVITPKTGFDPDYDKALQDIKA
VEKDLHEYLDKQRKLLGFKSMLYWGAGKNRYQIEIPESAISRNLPEEYELKSTRKGYKRY
WTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDVLMSLANY
SQDGDGPLCRPVILLPVDSTPPFLELKSSRHPCITKTFFGDDFIPNDIMIGCKDEDSSIE
ASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMSG
ESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAEKIKCRTLFS
THYHSLVEDYSHSAAVRLGHMACMVENESEDPSQETITFLYKFIEGVCPKSYGFNAARLA
NIPEEVVQKGHRKAKEFEKTTISLRIFRYLCLVVDDATSDTNAIQKLTTMISHL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggcagctgaagggccgcgggggacatggcggtgccggtgcccctgctttcct
cccgccgcggcggcggcgggagaggggcccgtcttcgggagtgtctcctgtgatttttca
cctggtgacttagtttgggccaagatggaaggttacccttggtggccatgtctcatatac
aaccacccaactgaaggaacaatagtcagaggaaaagggaaatctgctcgtattcatgta
cagttttttgatgacagtcccacaaggggctgggtcagtattaaatacctgaagccatac
aaaggttcatcagatggggaggcactgaagggaggtacgttttacagtacaaagcctgaa
attaaaagagcaatggtgctagcggatgatgcaatgagtaaagataaaactaagcgactt
gagcttgcagtatgcagtgaaccttcagacacggaggaggaggaggaggaggaggaggaa
atggagcagatgagtgaaagtgcatcaggcgacagtgatgactgcaatagtgaggagggt
gtgaagaccaataagcgagtagcgaatagagggagaagtgctgtaaaagccaaaagaaga
agagtgttggattctgacagtgatcatgaaggttctgatgtagagttcaagcctgatgtg
aaagaagcagcaagcagtgaggaagctagtagtggggtagatgaaaatgaatctaccggc
acagagacggacgcagagagcattgcagaaagccccattaaagtcccttctaaacgaaag
agaagagacacaagcaagcctgctaaaaggaatagcttaggaaatgaacgttctgaaaca
cctaaaagagcagcagtggtttctttagaagctaagtctaagctaacatcttttgcagca
cctgaaaattttgaatctcaagcaaatgcttgcagtggaggaattggtggctttgcagtg
tgggaacatgaaaagcttgactggctgcaggaagggaaaaggaaagatgcacgcaggaga
cgacaggatgatcctgattatgacccatgtactctttatgtacctgaggactatcttaac
aagtgtacaccaggaatacggaggtggtggcagctgaaaagtcaaaactttgatgctgtg
attttttacaaagttggaaaattctatgagttgtatcatatggatgcagtcactgctgta
aatgagttgggcctgatattcatgaaaggcacttgggcccattcaggttttccagaaact
gcatttggcagattttcggatgttctagtacagaagggctacaaggtagcccgtgttgag
caaacagaaacccctgaaatgatggaagcacgctgtaaatcaatggctcacccaacaaaa
tttgacaaggttgtacgccgagaaatatgtagaatcattactaaagggactcagacttac
agtgttctggattgtgatccatctgagaaccataacaaataccttctgtgcattaaagaa
aaagaagactcctctggacatcgtgtatatggggtttgttttgttgacacatcagtaggg
aagttttatgtaggccagttctcagatgaccggcactgttcgaggtttcgaactttagtg
gcgcattacactcctgtgcaggtactgtttgagaaaggcaacctctctgtggacacgcag
aagatcctgaaaggctcgcttgtttcttgcattcaggaagggttgagctctggttcccag
ttctggaatgcatctaaaacactaaaagttcttcttgaagaagaatatttcaaggagaaa
cagaactctgataacggatgttctctgccctctgtaatcaaatttatgacttcagagagt
gattcactgggattaactcctggtgaaaatagtgaattagctctgtcagctcttggggga
tgtatcttctatctcaaaagatgtttgattgatcaggagctgttatcattgggaaacttt
gaggagtatatccctgtggatattgatattgctaaaactacaagttcaagtagtttcttt
gccaaaactgaccaacggatggtgctggatggagtcaccctaatgaacttggaagtcctg
cagaatggaactaatggaaccacagaaggtactttgttggaaaggattgactcttgttgt
acgccatttggaaagcggctcctgaaacaatggctctgtgctcctctctgtaatcctaaa
tccatcaatgatcgtttagatgctgttgaagaccttctggcagtgcctgataaaatgtct
gaagttagtgagcacctgaagaaacttcctgaccttgaaagactactcagcaaaattcac
agcattggatcaccacttaaaagtcagaaccatcctgacagcagggccatcttttatgaa
gaaatcaagtatagcaaaaaaaaaattgctgattttttatctgcactggagggttttaaa
gtaatgaatgaaattgtagatgtcatggaagaaattgccagtgacttcaaatctaaagta
cttaagcagctagtcacccgcaaagccagaaatccagagggccgctttccggacttaaat
gcagaacttaaaaggtgggatactgcttttgatcataaccaggctcgaaagacaggagtg
attactccaaagacaggctttgaccccgattatgataaagcactacaggatattaaagct
gtagagaaagatcttcatgagtacctagataaacaacgcaaactgcttggattcaaatcc
atgctgtactggggggcaggcaaaaatcgataccaaatagaaataccagaaagtgcaata
tcacgtaatttgcctgaggaatatgaattgaagtcaaccaggaagggatataaacgttac
tggaccaaggagattgagaagatgctggctgcgatggttaacgctgaagagcggagagat
gcagcactaaaagactgtatgaggcgtttgttttacaacttcgataaaaatagcaaagac
tggcagacagcagttgaatgcattgctgtgttagatgtcttgatgtcccttgctaactac
agtcaagatggtgatggacctctgtgccgacctgtaattctactgcctgtggatagtact
cctccattcctggaacttaaaagttcacgccatccatgtattacaaaaactttttttgga
gatgattttattcctaacgacatcatgataggctgcaaagatgaagatagcagtattgaa
gcttcctgtgtgttagtaactggcccaaacatgggtggcaaatctacgctcatgagacag
gctggtctcttggttataatggctcaattgggatgttatgtacctgctgaagtctgcagg
cttacacctatcgacagggtatttacaagactgggtgcctcagacagaattatgtcaggt
gaaagtaccttctttgttgagttgagcgagacttccagcatactccagcatgcgacagag
cattcccttgttcttgtggatgaactaggtagaggcacagctacttttgatggaacagct
atagcaagtgcagttgttaaagaacttgcagagaaaatcaagtgtcgaactttgttttct
acacactaccattcactagtagaggattattcacacagtgctgctgtgcggcttggtcac
atggcatgtatggttgaaaatgagagtgaagatccaagccaggaaactattacattcctg
tacaaattcattgaaggagtatgtccaaaaagctatggcttcaatgcagcaagacttgct
aatattccagaggaggttgttcagaaggggcacagaaaagcaaaagagtttgaaaaaaca
acaatttcactgagaatatttaggtatctctgcttggtggtggatgatgcaacaagtgat
acaaatgctattcagaaacttaccactatgatcagtcatctttaa
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