KEGG   Apteryx rowi (Okarito brown kiwi): 112975127
Entry
112975127         CDS       T07573                                 
Symbol
CDH1
Name
(RefSeq) cadherin-1
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow04371  Apelin signaling pathway
arow04514  Cell adhesion molecules
arow04520  Adherens junction
arow05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:arow00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    112975127 (CDH1)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112975127 (CDH1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    112975127 (CDH1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    112975127 (CDH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arow03036]
    112975127 (CDH1)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:arow04515]
    112975127 (CDH1)
   04090 CD molecules [BR:arow04090]
    112975127 (CDH1)
Chromosome and associated proteins [BR:arow03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    112975127 (CDH1)
Cell adhesion molecules [BR:arow04515]
 Cadherins
  Major cadherins
   112975127 (CDH1)
CD molecules [BR:arow04090]
 Proteins
  112975127 (CDH1)
SSDB
Motif
Pfam: Cadherin Cadherin_pro CADH_Y-type_LIR Cadherin_4 TM_ErbB1
Other DBs
NCBI-GeneID: 112975127
NCBI-ProteinID: XP_025940621
LinkDB
Position
Unknown
AA seq 1509 aa
MSRLPRDAASQPGSALLPVRSGCCPQEAGAGPGADVLVLPDGPHSPLRRRKRDWVIPPIK
VPENERGPFPKKLVQIKSNRDRETKIFYSITGQGADTPPEGVFTIEKETGWMKVTQPLDR
EHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTPVM
RVNATDADDAVETYNGVIAYSILSQEPQEPHRQMFTINRATGTISVIASGLDRERVREYT
LTVQAADLDGDGLTTTALAIIEISDVNDNAPEFDPKTYAAAVPENEAGREVARLAVTDLD
EPDTPAWRAVYSIVRGNEGGAFAIATDPASNEGVLRTAEVRVGAGPPAASRSRPGPGDDA
RPLSQGLDYEAKRQFVLHVAVANEAPFAVKLPTATATVEVSVEDVNEAPAFEPPTRAAQV
PEDVPLGHTIAAYTARDPDRTQAQRIKYLMANDPAGWLEVHQESGLVTARAPLDRESPFT
RNGTYVAVLLAVDDGAPPATGTGTLLLTLLDVNDHGPEPEPRDIVVCNRSPQPQVLAIVD
RDLPPNTAPFRAELAHGSADSWAAEVSGDDAVTLRLTAPLEQALYSVYLRLFDARGKDQL
TVVAARVCDCEGHAESCGAAPRPAGSWRCDEAGPCQPGFTARTFAFTVPRDSVEVGRTLG
QVRFTDCAGQQRAAFIADDTRFRVRADGVVSVKRPLQLHRREIAFSVHAWDAAGRKHSAQ
VTLSRRRRHRHHQHPPVKRRPSPAPRAPLALPLLAFPEPGHGLRRQKRDWVIPPINCPEN
ERGPFPKKLVQIKSNKDKETKVFYSITGQGADSPPVGVFTIERETGWLEVTKPLDREDIS
RYILFSHAVSANGQPVEDPMEIVITVTDQNDNRPVFTQQVFVGYIEEGAKPGTSVMTVNA
TDADDGVNVDNGIINYSILSQEPPHQMFTIDPEKGIISVIATGLDRESTPNYTLIIQAAD
QEGKGLTTTATAIIEVTDANDNTPIFDPTMYEGTVEENKAGVVVARLKVKDLDVQGSPAW
RAVYYIKSGDQDYDFSITTDPKTNDGILRTAKVGCATAWLPWDRCPLGLDYEVKNRYELV
VGVSNEVPLTVSLPTSTANVLVIVRDVNEAPIFMPPVKRVEVSEDLPVGQEVTSYTAQDP
DKDQRQKITYRMGNDPAGWLAINPETGIVSTTRALDRESAHTLNSTYKAIVLAVDNGAPD
ATGTGTLLLVLQDVNDNGPTPEPRFFDICNRQPEEQMLTIVDKDLPPNTYPFQAGLEHGS
GTNWTVSPVSPASDGLVLKLVKELEPGEYSIFLKLTDGQGKAQVTLVKAQVCECEGAAKN
CERRAYVAGGLGVPAILGILGGILALLILLLLLLLFVKRRKVVKEPLLPPEDDMRDNVYH
YDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVEPPLMAAPQYRPRPANPNEIGNFIDEN
LKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDRDQDYDYLNEWGGRFKKLAD
LYGGGEEDD
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgtcccgcctgccccgggatgccgccagccagcccggctctgccctgctccccgtgcgc
agcgggtgctgcccacaggaagctggtgcaggacccggggccgacgtgctggtgctcccc
gatgggccccactctcctctgaggagacggaagagggactgggtgatccctcccatcaag
gttcctgaaaatgagaggggtccattccccaaaaagctggttcagatcaaatcgaaccgg
gacagagagacaaagatcttctacagcatcacggggcagggggcagacaccccccctgag
ggcgtcttcaccattgagaaggagacgggctggatgaaggtgacgcagccgctggaccgg
gagcacatagacaagtaccacctcttctcccacgccgtgtccgagaacgggaagcccgtg
gaggagcccatggagatcatcgtgacggtgacggaccagaacgacaacaagccccagttc
acccaggaggtgttcaggggctcggtgccggagggcgctttgccaggcacccccgtgatg
cgcgtgaacgccacggacgccgacgacgccgtggagacctacaacggcgtcatcgcctac
tccatcctcagccaggagccgcaggagccccaccgccagatgttcaccatcaacagggcc
acgggcaccatcagcgtcatcgccagcgggctggaccgtgagcgcgtgcgggagtacacg
ctgaccgtgcaggcggccgacctggatggcgatgggctgaccaccacagcgctggccatc
atcgagatctctgatgtcaatgacaacgcccccgaatttgaccccaaaacgtacgcagcg
gctgtgccagagaacgaggctgggcgggaggtggcccggctggccgtgacggacctggac
gagccggacacgccggcgtggcgcgccgtctactccatcgtgcgcggcaacgagggaggc
gccttcgccatcgccacggaccccgccagcaacgagggcgtcctcaggaccgccgaggtg
cgtgtcggcgccgggccccccgcggcctcccgcagccgcccggggccgggtgacgatgcc
cgtcccctctcgcagggtctggactacgaggccaagaggcagttcgtgctgcacgtggcg
gtggccaacgaggcgcccttcgccgtgaagctgcccacggccacggccacggtggaggtc
agcgtggaggacgtcaacgaggcgcccgccttcgagccaccgacgcgggcggcccaggtg
ccggaggacgtgccgctggggcacaccatcgccgcctacacggcccgcgaccccgaccgc
acgcaggcccagaggatcaagtacctgatggcgaacgacccggcgggctggctggaggtg
caccaggagagcgggctggtcacggcgcgcgccccccttgaccgcgagtcccccttcacc
aggaacggcacctacgtagccgtgctgctggccgtggacgacggcgcgccgccggccacg
ggcaccggcaccctgctcctcaccctgctcgacgtgaacgaccacggccccgagcccgag
ccccgggacatcgtcgtctgcaaccgcagcccccagccccaggtgctcgccatcgtcgac
cgggacctgccccccaacacggcgcccttccgcgccgagctggcccacggctcggcggac
agctgggccgccgaagtcagcggcgacgacgccgtgacgctgcggctgacggcgccgctg
gagcaggcgctctacagcgtctacctgcggctcttcgacgcccggggcaaggaccagctc
accgtggtggcggcccgagtgtgcgactgcgaggggcacgccgagagctgcggcgccgcg
ccgcgacccgccgggagctggcggtgcgacgaggcaggaccctgccagcccggcttcacc
gcccggaccttcgccttcaccgtgccccgggacagcgtggaggtgggcaggacgctgggc
caagtgagattcacggactgtgccgggcagcagcgggcagcgttcatcgcggatgacacg
cgcttccgggtgcgcgcggacggcgtcgtctcggtgaaacggcccctgcagctgcacagg
cgtgaaattgccttctccgtccacgcctgggacgcggcgggcaggaagcactcggcccag
gttaccctcagcagacggaggcggcaccgccaccaccagcaccccccggtaaagcgccgc
cccagccctgctcccagggcgcccctcgccctgcccttgctggccttccccgagcccggc
cacggcctccggaggcagaagagggattgggtcatcccgcccatcaactgcccggagaac
gagcgggggcccttccccaagaagctggtgcagatcaaatccaacaaggacaaggagacc
aaggttttctacagcatcacggggcagggggcggacagcccccccgtgggcgtcttcacc
atcgagcgagagacggggtggctggaggtgacgaagccgctggacagggaggatatcagc
agatacatcctcttctcccatgccgtgtcggccaacgggcagcccgtggaggaccccatg
gagatcgtcatcacggtgacggaccagaacgacaaccggcctgtgttcacccagcaggtc
ttcgtcggctacattgaggagggcgcgaagccgggtacctccgtgatgacggtgaatgcc
acagatgcagatgacggggtgaacgtggacaacggcatcatcaactactccatcctcagc
caggagccaccgcaccagatgttcaccatcgacccagagaagggcattatcagcgtcatc
gccacggggctggacagggagagcactcccaactacacgctgatcatccaggcagcggac
caggagggcaagggcctgaccaccacggctacggccattatcgaagtcactgacgccaac
gacaacactcccatcttcgaccccaccatgtacgaggggacggtggaggagaataaggca
ggggtggtagtggcccggctgaaggtgaaggacctggacgtgcaggggtcccctgcctgg
cgagctgtctactacatcaagagcggggaccaggactatgacttcagcatcaccaccgac
cccaaaaccaatgatggcatcctcagaactgccaaggtgggttgtgccaccgcatggctg
ccctgggatagatgtcctctgggcctggattatgaggtgaagaaccggtatgagcttgtg
gtgggggtgagcaacgaagtcccgttgaccgtgtccctccccacctccacggccaacgtc
ttggtgatagtcagagacgtgaatgaagcccccatcttcatgccccctgtcaagagggtg
gaggtgtcggaggatttgccggtggggcaggaggtcacgtcttacacggcccaggacccg
gacaaggatcagaggcagaaaatcacgtaccggatgggcaatgaccccgcggggtggctg
gccatcaaccctgagaccggcatcgtcagcaccacccgggccctggaccgggagtcggcg
cacaccctgaacagcacctacaaggccatcgtgctggccgtggacaacggggcgccggac
gccaccggcacggggacgctgctcctcgtcctgcaggacgtgaacgacaacgggcctacg
ccagagccccgtttcttcgacatctgcaaccggcagcccgaggagcagatgctgaccatc
gtggataaggacctgccgcccaacacctaccccttccaggcggggctggagcatggctcc
ggcaccaactggaccgtcagccccgtctctcctgcctcagacgggctggtcctcaagctg
gtgaaagagctggagccgggggagtacagcatcttcctgaagctgacggacgggcagggc
aaggcgcaggtgaccttggtcaaagcccaggtgtgcgagtgcgaaggggcggccaagaac
tgcgagcggcgggcgtacgtcgccggcgggctgggcgtccccgccatcctgggcatcctg
gggggcatcctggcactgctgatcctgctgctgctgctgctgctcttcgtcaagaggagg
aaggtggtgaaggagccgctgctgccgcccgaggacgacatgcgggacaacgtgtaccac
tacgacgaggagggcggcggtgaggaggaccaggactatgacctgagccagctgcatcgt
gggctggacgcccgccctgaggtcatccgcaacgatgtggaacccccgcttatggcagcc
ccccagtaccggccccggcccgccaaccccaatgagatcggcaacttcatcgacgagaac
ctgaaggcggccgacacggaccccacggcccccccctacgactcgctgctggtgttcgac
tacgagggcagcggctcggaggccacctcgctcagctccctcaactcctccgcctccgac
cgcgaccaggactacgactacctcaacgagtggggcggccgcttcaagaagctggcggac
ctctacggcggcggcgaggaggacgactag

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