Apteryx rowi (Okarito brown kiwi): 112975398
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Entry
112975398 CDS
T07573
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112975398 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112975398 (EDC4)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112975398 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112975398 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Uteroglobin
NBCH_WD40
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
112975398
NCBI-ProteinID:
XP_025941178
Ensembl:
ENSARWG00000018437
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
MCSVNENQRSSNSYNGDLNGLLVPDPIVTGDGPSLAKPVHRSISLGVLQEKQVICLSGDD
SSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLA
YAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRL
AMDKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEV
WDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQI
YIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTV
SWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAY
FSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLIVEGAQGAGAVESAAGVLI
KLFCVHTKALQDVQIRFQPLHSPDVAASIPSHGSHEEFAFPDHMADLSTEGLGSEKGSVH
GSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQITVSPGSSVSSLTAVT
AMSSTSVTDTSMPRASEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLPDKLTP
KAPVSVTPGNPSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQR
SFAAGPSGLPAEVLEPSHHADSMASAASALHLLSPRNRHNSDHSHHSLDMPQLEVDRLNA
PSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDEVEEKHKSSSYHRHSYH
LLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKRKG
KKDDGDVNQSPRSSNNQMTPEFQDELMCILRSQQRELSELRQNQVELLQRLTDHLDAVQS
SLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIR
EEMKKTVPQCISKSMEPVAGQLSNTIATKLTAVEGTLKENITKLVKSKNLTDTVVRATAD
TLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINETFKQGTQEYIQQLETHMKNKKAREQ
EARDPLLNQLRQLISTFQSTTEQLASTIAASVHAEVQHQLHIIVGNMQESILAQVQRVIK
GEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHLDFQSQQTHILQLLQQGHLNQAFQQA
LTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAV
MHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccgtaaatgagaaccagagatcatcaaattcatacaatggagacctgaatggg
ctgctggtgcctgatcccattgtgactggagatggaccttccctggctaagccggtgcat
cgcagcatttctctgggagtcctgcaggagaagcaagtcatctgcctttccggtgatgac
agctccacttgcatagtgatatcagcaaaagatgtggagatagtggccagcagtgattcc
agcatcaccagtaaggccagagggagtaacaaggtgaaaatacagcctgttgctagatat
gactgggagcagaaatattactatggcaatctgatagctgtttcaaattcttacctggct
tatgccattagagctgccagtaatggctccgctatggtgcgggtgttgagcgtcagcact
gctgagcggaccttgctgaaaggattcacaggcggtgtggcagacctggcttttgctcat
ctcaactccaaccagctggcatgcctcgatgaggctggcaacctttttgtctggcgcctg
gccatggataaagagaaaattcaagaggagatcttagtgaacatcaaacgacctgacaat
accccattgaacacctctcgaagaatcatctggtgtcctttcatcccagatgataacgag
gagagtggtgaagagggaagtcaaacattggcattgttgcacgaggacagggcagaggtg
tgggatttggacattattcgaacaaacaacagctcctggccagtggaagtgcctagcatc
aaagaaggcttcattgtagtgaaaggtcacagcacgtgcctgagtgagggagcactttct
ccagatggaactgtgttggccacagcaagccacgatggttttgtcaaattctggcagatc
tatattgagggacaagatgagccaaggtgtcttcatgagtggaaaccccatgatggtagg
cccctctcctgcctgctcttctgtgacaaccataaaaagcaagacccagaggttcccttc
tggagatttcttatcacaggagcagatcagaatagagagctgaagatgtggtgcactgtg
tcttggacctgtctgcagactgtccgcttttctccagacatcttcagctctatgagtatt
cttcccagcctgaaagtctgcctcgacctctccgctgaatatctgatactgagtgatgtg
caaagaaaagtcttgtatgtgatggagctgatgcagaatcaagaggagggcaaagcttac
tttagctccatctctgagttcctccttacccacccagtcctaagctttggcatccaggca
gtgagccgctgccgcttaaggcatactgaagtgctcccagcagaagaggaaaacgacaac
ttgattgtggaaggtgctcagggagctggggctgttgagtcggcagcaggcgtacttata
aaactcttctgtgtgcacaccaaggccctacaggatgtgcagatcagattccagcctctc
catagtcctgacgtggctgcatccataccttcccatggttctcatgaagaatttgccttt
ccagaccatatggctgatctaagcacagaagggctgggatctgaaaagggatctgtgcac
ggctctcaaccagacttacggcgtattgccgatctccctgtaccagcagactttctttct
ctctcaaatgatgccaagcctaagttgatgactccagatgcattcatgacgccaagtaca
tctcttcaacagatcactgtatctccaggcagtagcgtcagttccctgactgcagtcaca
gccatgagtagcacttctgtcactgacacctctatgcccagggcgtcggaagacttaaca
gtgagccccaagatgcagctggacaccagcctcacgctgagtagcagtagcagcagtctt
caaaccagtcctaggagccattcagttcttatccctggcctccctgacaagctaacacca
aaggcacctgtttcagtcacgccaggaaacccctctctagctctggaactgcaggaagtg
gagcccttggtggtgcctcaggcttctcccacccgtgaacgttcgccagacgtcatttcc
tctgcttccacagccatgtcccaagatatcccagagattgcttccgagaccttgcagcgc
agctttgcagctggtccgtctgggctccctgcagaggtgctggagcccagtcatcatgca
gacagtatggcatccgctgcttcagccttgcatttgctgtctccgaggaaccggcacaat
tctgatcacagccaccactctttggacatgcctcaactagaggtggacagactgaatgct
ccatcattactggagactgctttaactcaggaaaatgcatcttctgacagtgttgtgagt
cagccatggccagcagctcctgacataaccagagaaacgaggaacagcatggcggacagc
ccaagggatgaggttgaagaaaagcacaagagctcttcctatcaccgacacagctaccac
ctgctgcagcatgacagccaggatgctagcgcagaacaaagtgaccatgatgatgaagtt
gcaagtttggcttctacatcaggtggatttggtgccaaagcatctacgcagaggctgcct
gtgaaggactggaaagccaaggcatcccctcgggcttccccaaagctaaaacggaagggc
aagaaagatgacggggatgtgaaccagtcaccaagatcatccaacaaccagatgacacct
gagttccaggatgagctgatgtgcatattgaggagccaacagcgggagctctctgagctg
cgtcagaaccaggtggagctgttgcagagactcacggatcacctggatgcagttcagagc
tccctcatgggccatgtggagagggtgattgactcccaacaggagcaggagcagaggaga
ctagacagagcattgacagaaggacagcagcgcaatggacagctccaggagcatctttct
cagcagctctctcagtccctctccactgcagtgtgtaatcgtctggagagaaccattcgt
gaagagatgaagaagacggtaccccagtgcatttctaagagcatggaacctgttgctggc
cagctaagtaacactattgccaccaagctcactgctgttgagggcacactgaaagagaac
atcaccaagctagtgaaatcaaagaaccttacagatactgttgtgagggcaacggctgat
accctgcaaggaccgatccagtcagcatacagggaagcattccaaagcgttgtgttgcca
gcctttgagaagagctgccagtccatgttccagcaaatcaatgaaaccttcaagcagggc
acacaggaatatatccagcagcttgagactcacatgaagaacaagaaggcacgagaacag
gaggcccgggacccgctgctgaatcagcttcgacagctcatcagcaccttccagagcacc
actgagcagctggcttccaccattgcagccagtgtccatgctgaggtgcagcatcagctg
catattattgtgggcaacatgcaggagtctattctggcccaggtgcagagagtcattaaa
ggagaagtgagcttggctatgaaggagcagcaagcagctgtcacctcaagcattgtccag
gcaatgcgctcagcggcagggactccaatcccctctactcatctggacttccagtctcag
caaactcacatccttcagctgctgcagcagggacacctcaatcaagctttccagcaggct
ctaacagcagctgatctcaatctggtcctgtatgtctgtgagactgtggatcctcagcaa
gtgtttggccagcatccatgcccactgtcccagcctgtgctcctgtctctcattcagcag
ctctcctcggatttgggtactcgtacggaactgaaattgaattacttggaggaagcagtg
atgcacctggaccacagtgaccccattacccgagaccacatggggtctgtcatgaaccag
gtgcggcagaagctcttccagttcctgcaggtggaaccccacaacacgctgagcaaacct
gcccgtcgcctcatgattatgcttcagggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
