Apteryx rowi (Okarito brown kiwi): 112975462
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Entry
112975462 CDS
T07573
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arow03036
]
112975462 (CHD5)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112975462 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
112975462
NCBI-ProteinID:
XP_025941390
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
PKSIIAGSTLGRPDAPVSAESSSPSSRAWDRGFKAGQTARVAVACRWGEGQTAFCSGPQS
RTLLSRCSDGFWCPSSRPRVVPLTRHFTAKKGTAQVPLLLLNSDSCVYCCHSFGLPAVGN
HSLRPPDASFLSKRAKERSHWTSLCLLPWKTPLLSTPLKAAFCSPLEEEDDGVLEGLDEF
YPEEQVAVQKKKKSKKLKDSKAAKIKRRKKEGSNDEISDNEEEIEEKSESEGSDYSPNKK
KKKKLKEKKEKKPKRKKKDEEEDDNEDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTL
TNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVE
TVAIAPPLAASPPQSALPTVIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRF
GGIPNKRKKSSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGY
ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKE
EEXEEEEGAEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPR
CTCPPLKGKVQRILHWTWKEPPAPLPSVLPLPDAELAVPPPKALEGIPEREFFVKWAGLS
YWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKME
ERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQ
LYWNHRELMLGEDTRPPKKLNKKGKKLKEEKLEKPPETPIVDPTVKFDKQPWYIDATGGT
LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLS
TIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKF
HVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPL
QNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKN
MPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLF
PVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDF
LEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYD
SDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGS
KSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRIGMPDAVTPFSDTLSTKGGAVTPGM
KKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYV
VREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDA
SQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLAR
VGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRH
LCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGS
ESKKSSEIVSSDPNTPVPASPAHMHTGPVALXDKIETQLGFQEEKDQVEQKSKKVSDSQV
PASAEKVEREEHQESSENKEKVTEEKQEESGQAEPSPEPLVKDEAIQEKEKPLEKSELNS
SAGKGEDKEVKPEDAKVEEKEQNETQQNGEKEEEEEGKKDERNANFRFMFNIADGGFTEL
HTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSE
IHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECL
AESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMS
ERSILSRLTTRGGDPAVQQGSFGSSQIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTASS
SGPRSSHPDQKAAESLKDGAAVERQGKHGDVICIED
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
ccaaaatcaataatagcaggcagcacattagggcgtcctgatgctcctgtctcagcagag
agcagctcccccagctcacgtgcgtgggatcgtggcttcaaagcaggccagaccgcgagg
gttgctgtggcctgtcgctggggagaaggacagactgccttctgctccgggccgcagagc
cggaccctgctctctcgctgtagtgacgggttttggtgcccaagctcccgcccccgcgtt
gttcctctaacacgacatttcactgcgaagaaggggactgcccaggtcccgttgctcctt
ctgaattcagacagctgcgtgtactgctgccattcctttggtctgcctgctgtaggaaat
catagtctaaggcctccagatgcctcctttctttccaaacgggccaaagaaaggagtcat
tggacaagtttgtgtctcctcccctggaagaccccgctgctgtccacacctctgaaagca
gctttctgcagccctcttgaagaagaagatgatggggtcctggaaggactggatgagttt
tacccagaagaacaagttgccgtgcagaaaaaaaagaaatccaagaagctgaaagacagt
aaggctgccaaaatcaagaggaggaagaaagaggggagcaatgatgagatatcagacaat
gaagaggagatagaggagaagtcggagagtgaaggaagtgactattcccccaacaaaaag
aagaagaaaaaactgaaagaaaagaaagagaaaaagccaaaacggaaaaagaaggatgaa
gaggaggatgataatgaggatggaggtttaaaggagcccaagagctcagcccagctgatg
gaagaatggggcctggatgatgtagattacattttctcagaagaagactatcatactctg
actaattacaaggctttcagtcagtttctcaggcctctaatagccaagaagaatcccaag
atccctatgtccaagatgatgactgtgcttggtgccaaatggcgagagttcagtgccaac
aacccgttcaagggcagctcggcagcggcggcagcggcggcggttgctgcagctgtggag
actgtcgctattgcgcccccgctcgctgccagccctccgcagtctgccttgcccactgtc
atcaggaaagctaagaccaaggagggcaaaggtccaggtgtgcggaagaaaatcaagggc
tccaaagacgggaagaaaaagggaaaggggaaaaagatggcaggcttgaagttccggttt
ggaggaatccccaacaagaggaaaaagagctcttctagtgaagaggaagaacgggaagag
tccgactttgacagtgccagcatcaacagctcctcagtgcgctccgaatgctcggcgggc
ctggggaagagaggaaagaggaggagaaagaaaaagaggattgaagaaggggacggctat
gagacggaccaccaggactactgcgaggtgtgccagcagggaggggagatcatcctgtgc
gacacctgtcctcgcgcctaccaccttgtctgcctggaccccgagctggagaaggccccc
gagggcaagtggagctgcccacactgtgagaaggaggggatccagtgggagccgaaggag
gaggaggakgaggaagaggaaggtgctgaagaggaggaagatgaccacatggaattctgc
cgtgtctgtaaggatggaggggagctgctgtgctgcgacacrtgcccatcctcctaccac
ctgcactgcctgaacccaccgctgccggaaataccaaacggtgaatggctctgcccgcgc
tgtacatgccctcccctaaagggcaaagtccaacgcatcctgcactggacctggaaagag
ccgcctgccccgctcccgtcggtgctgcccctgccggacgccgagctggctgtcccgcca
cccaaggcgctggaggggatcccggagcgcgagttttttgtcaagtgggcagggctctcc
tactggcactgctcctgggtcaaggagctgcagctggagctctaccacactgtgatgtac
cgcaactaccaaaggaagaatgacatggatgagccgccggccttcgactacggctctggg
gatgaggacagccagagggagaagcggaagaacaaagatccgcagtacgccaagatggag
gagcggttctaccgctatggcatcaagcccgagtggatgatgatccaccgcatcctgaac
cacagctttgataaaaagggagacattcattatctgatcaagtggaaagacctgccctat
gaccagtgcacctgggagattgacgacatagacatcccgtactacgaaaacctcaaacag
ctctactggaatcacagggagctgatgctgggggaagacacgcgccctccaaagaagctg
aacaagaaagggaaaaagctgaaagaggagaagctagaaaagcccccrgaaactcctatt
gttgatcctacggttaagtttgacaagcagccgtggtacattgatgccacaggaggcact
ctccatccttaccagctagaagggctaaactggctgagattttcctgggcccaagggact
gayaccatcctggccgatgagatggggctagggaagaccgtgcagactattgtgttcttg
tattccctgtacaaggagggccactcgaaagggccgtatctggtcagcgcccctctctcc
accatcatcaactgggagcgtgagtttgagatgtgggcacctgacttctacgttgtgacc
tacacgggggacaaagaaagccggtcagtcatcagggaaaacgagttctcttttgaagac
aatgccatccggagtggaaagaaggtcttccggatgaagaaggaagcccagatcaagttc
catgtcctgctcacgtcctacgagctgatcactattgatcaggcggtgctgggctcaata
gagtgggcctgtctggtggtggatgaagcacacaggctgaagaacaaccagtccaaattc
tttagagtattaaatagctacaaaatcgattacaagctgctgctcaccgggactccactc
cagaacaacttggaagagctcttccacctgctcaatttcctgactccggagaggtttaat
aacctggagggattcctggaggagtttgcagacatctccaaggaggaccagatcaaaaag
ctccatgatctgctgggtcctcacatgctgcggcggctcaaggcggatgtgttcaagaac
atgccagccaagactgaactgatcgtgagagtggagctyagccagatgcagaagaagtac
tacaaatttatactgacaaggaattttgaagccttgaattcaaaaggtggtgggaaccag
gtctcgttgctcaacatcatgatggatctgaagaaatgttgtaatcatccatacctcttt
cctgtggcggctgtggaggcaccggttctgcccaatggatcctatgatgggaattctttg
gttaaatcttctggaaagttgatgctgctccaaaagatgctgaagaagttacgggatggg
ggccacagggttctgatcttctcccagatgacaaagatgttggacctgttggaggatttc
ctggagtacgaaggctacaagtatgagcggatagacgggggcatcactggaggcctgcgc
caggaagccatagacaggtttaatgctcctggtgctcagcagttctgctttctcctctct
acccgcgctggtggtctgggcataaaccttgctacggccgacacagtcattatttatgat
tctgactggaatccccacaatgacatccaggcgttcagcagagctcaccgcattgggcag
aacaagaaggtgatgatttaccgcttcgtgacacgagcctctgttgaagagcgcatcact
caggtggccaaaaggaagatgatgctcacccacttggtggtccgtccagggcttggctca
aagtcgggctccatgaccaagcaagagctggatgacatcctcaaatttgggacagaagag
ctttttaaggatgatgtggaaggcatgatgtctcagggccagcggattggcatgccggat
gcggtcacccctttctctgacacactgtcaaccaaaggcggtgcagtgactcctggcatg
aaaaaaaagcacggtggcaccccaccaggtgacaataaggatgtggatgacagcagtgtg
attcactatgatgatgctgccatctctaagcttctggaccggaaccaggatgcgactgat
gacacagaactgcagaacatgaacgagtatctgagctcctttaaagtggcccagtatgtt
gtgagagaagaggatggtgtggaggaggtggaacgtgagatcatcaagcaggaggagaat
gtagaccctgactactgggagaagctgctacggcaccactatgagcagcagcaggaagat
ctggccaggaacttagggaaagggaagagaattcgcaagcaggtcaattacaacgatgcc
tcacaagaggaccaagagtggcaggatgagctctctgacaaccagtccgagtactccatt
ggctctgaggatgaggatgaagactttgaagaaagaccagaaggtcagagtggcagaaga
caatcacggagacagctgaagagtgaccgagacaagcctctccctcctttgctggcaaga
gtcggggggaatattgaggttcttgggttcaacgcccgtcagcgcaaggctttcctgaat
gctatcatgcgctggggcatgcccccccaggatgcgttcaattctcactggctggtccgg
gatctgcgagggaagagtgagaaagagttcagggcttacgtctctctgttcatgagacac
ttgtgtgaacctggagcagatggtgctgaaacctttgcagatggtgttccccgggaaggg
ttgtcacgccagcacgtgctgactaggataggagttatgtcactagtaaggaagaaggtc
caggagtttgagcacgtcaatgggaagtacagcaccccagatctgattcttgaaggctca
gagagcaagaagtccagtgagattgtttcttcagaccctaacacgcctgtcccagccagc
ccagcgcatatgcacacggggcccgttgctctckcagataaaatagaaacacaactgggc
ttccaggaggaaaaggatcaagtagagcagaagtccaagaaggtgtctgacagccaggtg
cctgcaagtgctgagaaggtggaaagagaagaacatcaagaaagctctgaaaacaaagag
aaagtgacagaagagaaacaagaagagagtggacaggccgagccttctccrgagcctctg
gtgaaagatgaggcaattcaagaaaaagagaagcctttggaaaagtcagagttgaacagc
agtgcaggtaaaggggaggacaaagaagtcaaaccagaggatgccaaggtggaagagaag
gagcaaaatgagactcaacaaaatggtgaaaaagaggaagaagaggaaggaaagaaggat
gagagaaatgcaaacttcagattcatgttcaacattgctgatggtggctttacagagttg
cacacgctgtggcagaatgaggaaagagctgccatctcctctggcaagatctatgatatc
tggcaccggagacacgactactggctgctggcaggaattgtcactcacggctatgcccgc
tggcaggacatccagaacgacccgcgctatgtcattctgaatgaaccgttcaagtcggag
atacacaaggggaactacctcgagatgaagaacaagttccttgcccggcggttcaagttg
ctggagcaggccctggtgatagaggagcagctgcgaagggctgcctacctcaacatgact
caagaccccaatcacccggccatggcattgaacgcccgtctggctgaagtggagtgcctt
gccgagagccaccagcatctctccaaagaatcccttgctgggaacaagcctgcgaatgcc
gtcctgcacaaagtgctgaaccagctggaggagctgctgagcgacatgaaggccgacgtg
acgcgcctgccgtccatgctctccaggataccgcccgtggccgcccggctgcagatgtcc
gagcggagcattctcagccgcctcaccacccggggcggcgaccccgccgtccagcagggc
tcctttggttcctcccagatctacaacaacaactttgggccaaatttccgaggtcctgga
ccaggtgggattgtcaactacagtcagatgcctctgggaccgtatgtgaccgcaagctcc
agcgggcctcgctccagccacccggatcagaaagcagcagagtcgctgaaagacggcgcc
gccgtggaacggcaggggaagcacggcgacgttatctgcatcgaagactag
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integrated database retrieval system
