Apteryx rowi (Okarito brown kiwi): 112975543
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Entry
112975543 CDS
T07573
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03440
Homologous recombination
arow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112975543 (PALB2)
03460 Fanconi anemia pathway
112975543 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arow03400
]
112975543 (PALB2)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
112975543 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
112975543 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
112975543
NCBI-ProteinID:
XP_025941574
Ensembl:
ENSARWG00000002964
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MEELSGAEREKLREKLALLRREYSETVSRLRRAQRAERVQGFVQRTVAEQNRLLGEGETP
QSPAGSRDTVSPSAGKHETCQLQTKSCSVPGTKKKTSVTFKQKPEFFNDKVSLSNSSQAE
STKASRENVCSGIVRPAAEEKKTQTSRGMMKLRRRRTKTVVPEERESLHDVLLINADEKV
KNQMANEEDLGSPVFRRSSFSNMEEDAHRASRPALVRREGNSLTPPDAELGVVQETLEDS
IPVGMPELFSCASRDSSDVRQPGPPNAVAVSANCEPAPLCLENSESILPDTSDDGGKEPS
NVKNQTINESKCEDQGELCKLLDLVSEKEVLPTDRNNTVINESENPEGNQNDTNGLNRFP
TDSLTGNVEKLLETQELETESRFSHLEKVTTPETESALNSCTVVEGLLFPVEYYVRTTRR
MSNCQRKVDLDAVILSQLGRSKKGLRNKCKQKDANSDRPSQEAVENDEESGAVPFPFLGA
ENSPVNSSSPRQSLPPSDSSSTSLGSISQNSIASTKNEQRQSQRKQKGRRKSACKPTVNQ
ASQELLVDLDLVTPKESSSVLSNDCQSEKENSKGNLEKSSLDEIRLSGAAALGSGETEAP
GTMQPMSADPSSVGSQVLGKCHKTLLEQVQNPLQKSDSLNPGKETFASCVGDLDVNLSVC
QSDKHPVEHVKNQHVRGACRAEQLLGINECLSPHRPLRSSARQRASRVSKXESKRGHSHQ
MDSEDPVSLGLPAMDPDTADSLFSFRSLQWLPSRLGIKDFHLPDEEFGLLKLEKFKSSPV
NDLEVFVPSTSGDGVASEDTQDPQMNAEKKKHESNLISPFKNVLSKLPHLESPASKKGLC
TSELLFTPMETVLAGAPSQPESQISSSLFPVLGATPAVLPSVNSNIFPTTPSVLPLQVNI
HSSKGASGQVVDRRECRDSAIPLDSDSCGAESARKEEGQCATFHLEAERDPNHRSDEXMA
LKKHQQSESKQQGSCRAPVEQEKTVAEQLAVVLLDGLGEENLQLVSKLKDSSHSCAVDVS
TMWWEAGGCRELCVVTACESSVSLWKLLAPGHWGKVYTWQPGEIPVIQIIPLPDTCNLVC
IALGDLEIGEIRLLLYSSENDSFKQSLVKTGTIKAVLGLKDRRLVSSSRTVQEQQVEMIS
FSETGRSKEGQTLMPPEETVLAFAEVEGMRDALVGTTAVNSIVVWNLKTGQLLKKMHVGY
SYPASICHRAYSDSGLLFVVLSHPHAKESELCGNPAFRVIAFNPKTARSTGVIFSSLPPG
HAGRYLEGEVKDASAAAVLTSGTIAVWDLLLGQCTALLPPNSNGSWSLVRWSVTSACLLA
GQKDGSVYLYHYSQPKAGKT
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcggcgccgagcgggagaagctgcgggagaagctggcgctgctgagg
cgggagtacagcgagaccgtgagccggctgcggcgcgcgcagagagccgagagagttcag
ggcttcgtccagagaacggtcgcagagcaaaaccgcctgctcggggaaggggagaccccg
cagagccccgcaggttctagagataccgtatctcctagtgctggtaaacatgaaacctgt
cagttacagaccaaaagctgctctgttcctggcacaaagaagaaaacatctgtcacattt
aaacaaaaacctgaattcttcaacgacaaagttagcttgtcaaacagttcacaggcagaa
agtacaaaggctagccgggaaaatgtctgcagtggaattgttaggcctgctgctgaggag
aaaaaaacccaaacctcaagaggtatgatgaagctgaggaggaggagaacaaagactgtg
gtgccagaggaaagggaatctctgcatgatgtgctgctaataaaygctgatgaaaaggtg
aaaaatcaaatggccaatgaagaggaccttgggtcaccagtgttcagacgaagcagtttc
tcaaacatggaggaagatgctcacagagcctccagaccagcccttgtgaggagagaagga
aacagtttaacacctccagatgcagagttaggagtcgtacaagaaacacttgaagacagt
atccctgtaggaatgcctgagctattttcatgtgcttcaagggacagcagtgatgtccgg
cagcctgggcccccaaatgctgtggctgtgtctgctaactgtgagcctgcaccgctgtgt
ttagaaaacagtgaatctattttacctgacaccagtgatgatggaggaaaagaaccttcc
aatgtaaaaaaccaaacaattaatgagagtaagtgtgaagatcagggagaattatgtaag
ctcttggatttagtgtcggagaaagaagtattgcccactgacagaaataacactgtaatt
aatgagagcgaaaaccctgaaggaaatcagaatgacactaatggtttaaatcgctttcct
acagattctcttacaggcaatgttgaaaaactgttggagactcaagagcttgaaactgag
tcaagattttctcacctagagaaggtgacaactcctgaaactgaaagtgcattgaactct
tgcacagttgttgaagggcttctatttccagttgaatactatgtcaggacaactcgccgt
atgtctaattgccagaggaaagtggacctagatgcagtaattctcagccagctgggtagg
agcaagaaaggtctgcgaaataagtgcaagcagaaagatgcaaattcagatcggccctcc
caagaagcagttgaaaatgatgaggagtcaggggccgtgccattcccttttcttggtgca
gaaaacagtccagtgaattcaagtagtcctcgacaatctcttcctccatctgacagtagc
agcacttcgcttggatccatctctcagaacagtattgctagcacaaagaacgagcagaga
caatcacagaggaaacaaaagggaagaagaaagtctgcatgcaaacccactgtgaatcaa
gcgtcacaggaacttctagtggatttggatctcgtaacaccaaaagaaagcagtagtgtc
ttatcaaacgactgtcagagcgaaaaggaaaactccaagggtaatcttgaaaaatcgtct
ttagatgagataaggttgtctggtgctgcagctcttgggtctggagagacagaagcgcct
ggcactatgcagccaatgagtgctgatccttcttctgttggaagtcaagtacttggcaaa
tgccataagactctgttagaacaggttcaaaatccacttcagaagagtgattctttgaac
ccagggaaagaaacttttgccagctgcgtaggagatctggatgttaacttaagtgtgtgt
caatctgataaacatccagtggaacatgtgaagaatcaacatgtgcgaggagcctgcagg
gctgagcagctcctagggattaatgaatgtctctctccacaccgtcccctacgttcctct
gcaagacagagagccagtcgagtctcaaaagktgagagcaaaagaggacatagccatcaa
atggattcagaggatccagtttctcttggtctccctgctatggaccctgatactgcagac
tctctctttagcttccgcagtctccagtggctgccctccagactgggtattaaagacttt
cacttacctgatgaggaatttgggctactaaaacttgagaaatttaaatcttcccctgtg
aatgatttagaggtttttgttcctagtacgtctggagatggtgtggcttcagaggacaca
caagatccacaaatgaatgcagaaaagaagaagcatgaaagcaatttgatttcgcctttc
aaaaatgtgttgtccaagttacctcatttagaaagcccagcttccaagaagggactttgc
acaagtgaattgctctttactcccatggagactgtcttagctggtgctcccagtcagcct
gagtctcagatttcctcatctcttttccctgtcttgggtgcaaccccagctgtcttacca
tcagtaaacagtaacatctttcccaccacaccttctgtgcttcccttgcaagtgaacatt
cattcctccaaaggagcatctggccaggttgtggatcgtagggaatgtagagactctgcc
attccactggactcggacagctgtggtgcagaatctgctagaaaagaggagggacagtgt
gcaacatttcatttagaagctgaaagagaccctaatcatagatctgatgagatratggcc
ttaaagaagcatcagcaatcagagagcaaacagcagggatcctgcagagcacctgttgaa
caggaaaaaactgtagcagaacagttggctgtggtactgcttgatggcctgggagaagag
aacttgcagcttgtatcaaagttaaaggattcctcgcattcttgtgctgtggatgtgagt
accatgtggtgggaagcaggtggctgcagagagctatgtgttgtgacggcttgtgagagt
tctgtttccctgtggaaacttctggcgcctggccactggggaaaggtctatacttggcaa
cccggagagattccagtaatacagattattcctctgccagacacctgtaatctcgtgtgt
atagcattgggagatttggagattggagaaataaggctcttgctttattcttctgagaat
gactcattcaagcaatcactagtaaaaactggaactataaaagctgttcttgggctaaag
gataggaggctggtcagcagcagcagaactgtgcaagagcaacaagtggagatgatatca
ttttcagagacaggaaggagcaaggagggacagactttgatgccccctgaagaaactgtt
ctggcttttgctgaagtagaaggaatgagagatgctttggttggcaccactgcagtgaac
agcattgttgtttggaatttgaaaacgggccagctcctgaaaaagatgcacgttggttat
tcctacccagcttcaatctgccatcgagcgtattctgactctggccttctgtttgttgtt
ttaagtcacccacatgccaaagagagcgagctctgtggaaaccctgcattccgcgtgata
gccttcaatcccaaaacagccaggagcactggagtgattttctcctccctcccacctgga
catgctggaaggtacctggaaggtgaagtgaaggatgcttctgctgcggctgtgctaacg
tcgggaaccatcgcggtgtgggacctacttctagggcagtgcacagctctactgccaccc
aattcgaatgggagctggtcgctggtccgatggtctgttacaagtgcctgtctgctggct
ggacagaaagacgggagtgtttacctgtatcattattcacagcctaaggcaggaaagact
tga
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integrated database retrieval system
